You are here

Home

ATCC64974_90090-T1, ATCC64974_90090-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_90090-T1
Unique NameATCC64974_90090-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:1063409..1064953+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_90090-T1 ID=ATCC64974_90090-T1|Name=ATCC64974_90090-T1|organism=Aspergillus niger N402|type=mRNA|length=1545bp|location=Sequence derived from alignment at OGUI01000016.1:1063409..1064953+ (Aspergillus niger N402)
ATGATCAGATGTCCCATATGCCAGAAACACGTCCCTCTATCCAAAGTCAA
CGAGCATCTCGATTCTGGCTGTCAAGCGTTCATCGCAACCACCCACCCAC
AGACTACGACATCGTCTACTCTGATCGAAAATGACTGCAATCCTCAAGAA
AAAAGGAAGAACATCAGTGAGAGAATCACAGGTCAACAGGACCGTTCGCT
AGTGTTACCGGAAGCTCAAAGAGAGCGGTCTCAACCGGAGTCCAATACCG
CACGAAAGAAGCCACATACGGGATCAGCAACGGAGCAATTACATCTTCGG
AATGCACCTTTAGCTGAGCAAGTCCGGCCACGATGCTTCGATGAAATCGT
CGGTCAGAAGTCCTTGATCGGGCCAAATGGAACACTCAGGCGGTTGATTG
AACAAGATGAGCTTCCGAACCTGATTTTATGGGGGCCCCCAGGAAGTGGT
AAAACTACAATTGCCAGGATCGTCGGGCCAATGATGAGGAGAAAGGTCTA
CGAGATCAGTAGCTTGACTACAACAACGACAGAGTACAGAGACATTGTCA
CCAAGGCTACACAGGATGTGCACGATGGTCGGAATAAATCCATCATATTC
TGTGATGAGATACATCGACTCACGCGTCCACAACAAGATATTTTTCTCGA
TGCTATGCGAAGGAATAAAATCACTCTCATCGGTGCGACGACAGAGAACC
CATCATTGAATCTTCATCATACTTTTGTCTACAAATGCAGGGTCTTCACT
GTCGCAAAGCCAACTACCAATGATTTGGCCGCTATTCTTCGTCGTTCACT
ACAATCACAAACCCACCTGAAATCATCCCCTCTCCTGGATGATGAATTTC
TTCAATACATAGCTGAATTCGCTGATGGGGACGGTAGAACCGCACTGAAC
GTTCTGGAGATAGCTACGGATCTCTGCAGACGACCAAATATGACAAAGGA
GAAGCTGAAGCATTCATTAACCAAGAGCTTACTCTACGACCGTTCGGGTG
ACCAGCACTATGACACCATTTCAGCACTTCACAAGTCAATTCGAGGCAGT
GATCCCGATGCTGCGCTATATTACCTTGTACGAATGCTCCAGCCAGGCGA
GAACCCTTTGTTCATCGCTCGCCGGCTTATCGTGGCGACGTCGGAGGACA
TTGGACTGGCGAATAATGTGTTGCAAACATATGCAACCTCAGTCTACTTG
ATGATTGAGAAGCTAGGGATTAATGAAGCACAGTCTGCTTTGGCTCAACT
GGTGATAACAATGTGTTTGTCGAAGAAGAGCACTCGATCCTATCGTGGGC
TTAATAATGCCCTTGCTGCAGTGAAGGAGCCTGGGATGGGCGATCTTCCA
ATTCCTTTTCACATCTTGGATCGTAGACACGAGCTTCTGAGAGAGGCTGA
CCGGGTCGTGACTACTGACTCCCAACAAAGTCAGAAAAGGCTGCCATCTA
CCCAGGGGTTTCTTCCGCATGCTCTCGAAGGTCGGAAGTTTCTGGAAGAT
ACTGATTTTCTGTTCAAACGAGATCCCGACCTAAGTTATGGGTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:1063409..1064953+

>ATCC64974_90090-T1 ID=ATCC64974_90090-T1|Name=ATCC64974_90090-T1|organism=Aspergillus niger N402|type=CDS|length=1545bp|location=Sequence derived from alignment at OGUI01000016.1:1063409..1064953+ (Aspergillus niger N402)
ATGATCAGATGTCCCATATGCCAGAAACACGTCCCTCTATCCAAAGTCAA
CGAGCATCTCGATTCTGGCTGTCAAGCGTTCATCGCAACCACCCACCCAC
AGACTACGACATCGTCTACTCTGATCGAAAATGACTGCAATCCTCAAGAA
AAAAGGAAGAACATCAGTGAGAGAATCACAGGTCAACAGGACCGTTCGCT
AGTGTTACCGGAAGCTCAAAGAGAGCGGTCTCAACCGGAGTCCAATACCG
CACGAAAGAAGCCACATACGGGATCAGCAACGGAGCAATTACATCTTCGG
AATGCACCTTTAGCTGAGCAAGTCCGGCCACGATGCTTCGATGAAATCGT
CGGTCAGAAGTCCTTGATCGGGCCAAATGGAACACTCAGGCGGTTGATTG
AACAAGATGAGCTTCCGAACCTGATTTTATGGGGGCCCCCAGGAAGTGGT
AAAACTACAATTGCCAGGATCGTCGGGCCAATGATGAGGAGAAAGGTCTA
CGAGATCAGTAGCTTGACTACAACAACGACAGAGTACAGAGACATTGTCA
CCAAGGCTACACAGGATGTGCACGATGGTCGGAATAAATCCATCATATTC
TGTGATGAGATACATCGACTCACGCGTCCACAACAAGATATTTTTCTCGA
TGCTATGCGAAGGAATAAAATCACTCTCATCGGTGCGACGACAGAGAACC
CATCATTGAATCTTCATCATACTTTTGTCTACAAATGCAGGGTCTTCACT
GTCGCAAAGCCAACTACCAATGATTTGGCCGCTATTCTTCGTCGTTCACT
ACAATCACAAACCCACCTGAAATCATCCCCTCTCCTGGATGATGAATTTC
TTCAATACATAGCTGAATTCGCTGATGGGGACGGTAGAACCGCACTGAAC
GTTCTGGAGATAGCTACGGATCTCTGCAGACGACCAAATATGACAAAGGA
GAAGCTGAAGCATTCATTAACCAAGAGCTTACTCTACGACCGTTCGGGTG
ACCAGCACTATGACACCATTTCAGCACTTCACAAGTCAATTCGAGGCAGT
GATCCCGATGCTGCGCTATATTACCTTGTACGAATGCTCCAGCCAGGCGA
GAACCCTTTGTTCATCGCTCGCCGGCTTATCGTGGCGACGTCGGAGGACA
TTGGACTGGCGAATAATGTGTTGCAAACATATGCAACCTCAGTCTACTTG
ATGATTGAGAAGCTAGGGATTAATGAAGCACAGTCTGCTTTGGCTCAACT
GGTGATAACAATGTGTTTGTCGAAGAAGAGCACTCGATCCTATCGTGGGC
TTAATAATGCCCTTGCTGCAGTGAAGGAGCCTGGGATGGGCGATCTTCCA
ATTCCTTTTCACATCTTGGATCGTAGACACGAGCTTCTGAGAGAGGCTGA
CCGGGTCGTGACTACTGACTCCCAACAAAGTCAGAAAAGGCTGCCATCTA
CCCAGGGGTTTCTTCCGCATGCTCTCGAAGGTCGGAAGTTTCTGGAAGAT
ACTGATTTTCTGTTCAAACGAGATCCCGACCTAAGTTATGGGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_90090ATCC64974_90090Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_90090-T1.exon1ATCC64974_90090-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_90090-T1.cdsATCC64974_90090-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_90090-T1ATCC64974_90090-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR008921
DBxrefInterPro:IPR021886
DBxrefInterPro:IPR032423
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR006642
DBxrefInterPro:IPR003593
DBxrefPFAM:PF05496
DBxrefPFAM:PF12002
DBxrefPFAM:PF16193
DBxrefPFAM:PF07728
DBxrefPFAM:PF00004
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:1063409..1064953 +
Powered by Drupal