You are here

Home

ATCC64974_9040-T1, ATCC64974_9040-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_9040-T1
Unique NameATCC64974_9040-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:505197..506789+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_9040-T1 ID=ATCC64974_9040-T1|Name=ATCC64974_9040-T1|organism=Aspergillus niger N402|type=mRNA|length=1593bp|location=Sequence derived from alignment at OGUI01000002.1:505197..506789+ (Aspergillus niger N402)
ATGGCTTCCTCTGTCTTCTTGCCGCTACTTGCGGCCTCATTACTGCCCAC
ACTCGCTTCTACACAGAATGCCGATACACCGACATCCGCTCCTACTGTGC
AAGTCCGCAATGGCACATACGAGGGTCTCTATAATCCCACGTACAATCAG
GACTTGTTCCTCGGCATACCGTATGCGCAGCCTCCGGTTGGTGAGCTACG
ATTCCGTCCACCACAACCGCTCAACACGACGTGGACTGGCACTCGAAATG
CAACAGCCTATTACAATGAATGTATCGGTTATGGTAGCGACGACTGGTAT
TGGACCGACGTGGTCTCCGAAGATTGTCTCGCTCTCAGTGTGATTCGACC
TCACGGCATCGACTCAAGCGCGAAGCTGCCCGTCGTCTTCTGGATGCATG
GTGGAGAATTCGCAGAAGGAGGCACTCGCGACTCCCGTTACAACCTCTCC
TACATCGTCCAACAATCCCAGGAGATGCAATCTCCCATCATTGGCGTGAC
TGTCAACTACCGCCTTTCGGGATGGGGATTCCTCTATAGCCAGGAAGTCG
CCGACGAAGGCTCCGCCAACTTAGGACTCCGCGACCAACGGCACGCTCTG
TACTGGCTCCAAGAGAATATCGCTTCCTTCGGCGGCGACCCGTCGCGGCT
CACCATCTGGGGCCAAAGTGCCGGTGCCAACAGCGTCGGTCTCCATTTAG
TGGCATACGACGGCCAGAATGATGGCATCTTCCGTGCCGGGATCGCCGAG
AGCGGCTCCGTACCCTCCCTCGCAGCATACATGAGCGCCGAAGATGCACA
ACCATACTATGATGCCGTCGTCAACGCAACCAACTGCACCGGCTCTTCCA
ACACCCTTACTTGTCTCCGTGAAGTTCCCACCGACGTCCTCAGCTCCATC
TTCAACAGCTCCCTCGTCGCTGGGGCAGGATATCATCCCGTCATTGACGG
CGATTTCCTCAGAGCCTCGGGGATAGTTAATCTCCAGACTGGCCAATTCG
CCAAAACCCCGCTTCTTATCGGCACCAACTTCGACGAAGGGACCAAGTAT
GCCCCTCATGGCTATAATACCACCGACCAATTTGTCTCCCTCGTCCAAGC
CAACGGAACCAATTATACCAGCGCTCTCACCATTGCATCCCTGTACCCAG
ATGACCCAGCCGTTGGTATTCCGGGAACCCTTCAAGGTCGTCCCCCACCG
TCATACGGTTACCAGTGGAAGCGCGTGGCTGCCTTCCTCGGCGATCTGCT
CATGCACGCGCCTCGCCGCGTGACAACCCAGTGGCTGGCACACTGGAATG
TACCTGCCTACGTGTATCACTGGAACGTGATGACACTAGGGCCATTAGAT
GGAGCCGCGCATGGCTATGAAGTCCCCTTCAGTTTCCATAATTATGATGG
TTTGGGCGATGAACGGGGAAACGACAGCGTGACCTGGCCACAACTATCGA
CTATGATGTCACGGATGTGGGTGAGCTTTATTAATCATTTGGATCCGAAT
TATAGTAATAGTGAGTGGTTTGCCCCACCTACCTCTGCACACTGCTTTAG
GAGCTTGAGGGTAAGGAAGGATGCTGACACGCTGCTCTGCTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000002.1:505197..506789+

>ATCC64974_9040-T1 ID=ATCC64974_9040-T1|Name=ATCC64974_9040-T1|organism=Aspergillus niger N402|type=CDS|length=1593bp|location=Sequence derived from alignment at OGUI01000002.1:505197..506789+ (Aspergillus niger N402)
ATGGCTTCCTCTGTCTTCTTGCCGCTACTTGCGGCCTCATTACTGCCCAC
ACTCGCTTCTACACAGAATGCCGATACACCGACATCCGCTCCTACTGTGC
AAGTCCGCAATGGCACATACGAGGGTCTCTATAATCCCACGTACAATCAG
GACTTGTTCCTCGGCATACCGTATGCGCAGCCTCCGGTTGGTGAGCTACG
ATTCCGTCCACCACAACCGCTCAACACGACGTGGACTGGCACTCGAAATG
CAACAGCCTATTACAATGAATGTATCGGTTATGGTAGCGACGACTGGTAT
TGGACCGACGTGGTCTCCGAAGATTGTCTCGCTCTCAGTGTGATTCGACC
TCACGGCATCGACTCAAGCGCGAAGCTGCCCGTCGTCTTCTGGATGCATG
GTGGAGAATTCGCAGAAGGAGGCACTCGCGACTCCCGTTACAACCTCTCC
TACATCGTCCAACAATCCCAGGAGATGCAATCTCCCATCATTGGCGTGAC
TGTCAACTACCGCCTTTCGGGATGGGGATTCCTCTATAGCCAGGAAGTCG
CCGACGAAGGCTCCGCCAACTTAGGACTCCGCGACCAACGGCACGCTCTG
TACTGGCTCCAAGAGAATATCGCTTCCTTCGGCGGCGACCCGTCGCGGCT
CACCATCTGGGGCCAAAGTGCCGGTGCCAACAGCGTCGGTCTCCATTTAG
TGGCATACGACGGCCAGAATGATGGCATCTTCCGTGCCGGGATCGCCGAG
AGCGGCTCCGTACCCTCCCTCGCAGCATACATGAGCGCCGAAGATGCACA
ACCATACTATGATGCCGTCGTCAACGCAACCAACTGCACCGGCTCTTCCA
ACACCCTTACTTGTCTCCGTGAAGTTCCCACCGACGTCCTCAGCTCCATC
TTCAACAGCTCCCTCGTCGCTGGGGCAGGATATCATCCCGTCATTGACGG
CGATTTCCTCAGAGCCTCGGGGATAGTTAATCTCCAGACTGGCCAATTCG
CCAAAACCCCGCTTCTTATCGGCACCAACTTCGACGAAGGGACCAAGTAT
GCCCCTCATGGCTATAATACCACCGACCAATTTGTCTCCCTCGTCCAAGC
CAACGGAACCAATTATACCAGCGCTCTCACCATTGCATCCCTGTACCCAG
ATGACCCAGCCGTTGGTATTCCGGGAACCCTTCAAGGTCGTCCCCCACCG
TCATACGGTTACCAGTGGAAGCGCGTGGCTGCCTTCCTCGGCGATCTGCT
CATGCACGCGCCTCGCCGCGTGACAACCCAGTGGCTGGCACACTGGAATG
TACCTGCCTACGTGTATCACTGGAACGTGATGACACTAGGGCCATTAGAT
GGAGCCGCGCATGGCTATGAAGTCCCCTTCAGTTTCCATAATTATGATGG
TTTGGGCGATGAACGGGGAAACGACAGCGTGACCTGGCCACAACTATCGA
CTATGATGTCACGGATGTGGGTGAGCTTTATTAATCATTTGGATCCGAAT
TATAGTAATAGTGAGTGGTTTGCCCCACCTACCTCTGCACACTGCTTTAG
GAGCTTGAGGGTAAGGAAGGATGCTGACACGCTGCTCTGCTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_9040ATCC64974_9040Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9040-T1.exon1ATCC64974_9040-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9040-T1.cdsATCC64974_9040-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9040-T1ATCC64974_9040-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000021.5
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-21)
NoteMEROPS:MER0033188
DBxrefInterPro:IPR019826
DBxrefInterPro:IPR002018
DBxrefInterPro:IPR029058
DBxrefPFAM:PF00135
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:505197..506789 +
Powered by Drupal