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ATCC64974_90600-T1, ATCC64974_90600-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_90600-T1
Unique NameATCC64974_90600-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:1232026..1233011-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_90600-T1 ID=ATCC64974_90600-T1|Name=ATCC64974_90600-T1|organism=Aspergillus niger N402|type=mRNA|length=986bp|location=Sequence derived from alignment at OGUI01000016.1:1232026..1233011- (Aspergillus niger N402)
ATGACAGGCTTCGATTTCTCCAACTACAACCGTAACGCGGCTCTCCACGC
GAAGGGAGTCCCTCTTCCCAAAGCCACCAGCACCGGTACCACCATCGTGG
GATGTATATACGACAATGGCGTTGTGGTAGGTACCTCCGGAGCAACCCAA
CAAGCTCCCTAGTACCCAAGACGACGATCACGAACTCACCACATCTGGCA
TAACCACAGATTGCAGCAGATACCAGAGCCACCAGCGGCCCGATAGTAGC
AGACAAGGTAAGCACCGCTTTTCCCAGGACATTCACACCTATCTCCAATA
ACCCAACTCAACAACTAACACACTACCCCCCACACCTCCAGAACTGCGAG
AAACTACACTACATCGCGCCCAAGATCTGGTGCGCCGGAGCCGGAACGGC
CGCCGACACCGAGTTCACGACGGCGTTGATCAGCTCGAACATCGAACTGC
ACGCACTTTCGACGGGCCGGCCCCCACGCGTAATCACCTGCATGACGATG
CTGAAGCAGCACCTATTCCGATACCAAGGCCACATCGGCGCCTACCTGGT
TGTGGCGGGTGTCGATCCCACCGGCATTGGTCTTTTCACCGTCCACGCCC
ACGGATCCACCGACAAGCTTCCCTACGTGACCATGGGATCAGGTTCTCTG
GCCGCGATGTCGGTGTTCGAGTCGACATGGAAGCCGAATCTGGACCGTGA
GGGCGCGATCGCCCTGTGCGCGGAGGCCATCAAGGCCGGTATCTTCAACG
ATCTGGGATCCGGTAGCAATGTCGATGTTTGCGTCATTGAGAAGGACAAG
CCTACGCAGTTGCTGCGGAACTACATCAGGCCTAATGAGCGTGGCGAGAA
GGAGCGCAATTACCGCTTCCCCAAGGGTACTACGGCTTATTTGAACCAGA
AGATCATCAGCAAGGAGGATATGCGGAAGTATATCTCTGTTGAGGAGGCG
TCTGGTGATCCTAATTTGATGGAGGTGGATGTCTAA
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Coding sequence (CDS) from alignment at OGUI01000016.1:1232026..1233011-

>ATCC64974_90600-T1 ID=ATCC64974_90600-T1|Name=ATCC64974_90600-T1|organism=Aspergillus niger N402|type=CDS|length=2457bp|location=Sequence derived from alignment at OGUI01000016.1:1232026..1233011- (Aspergillus niger N402)
AACTGCGAGAAACTACACTACATCGCGCCCAAGATCTGGTGCGCCGGAGC
CGGAACGGCCGCCGACACCGAGTTCACGACGGCGTTGATCAGCTCGAACA
TCGAACTGCACGCACTTTCGACGGGCCGGCCCCCACGCGTAATCACCTGC
ATGACGATGCTGAAGCAGCACCTATTCCGATACCAAGGCCACATCGGCGC
CTACCTGGTTGTGGCGGGTGTCGATCCCACCGGCATTGGTCTTTTCACCG
TCCACGCCCACGGATCCACCGACAAGCTTCCCTACGTGACCATGGGATCA
GGTTCTCTGGCCGCGATGTCGGTGTTCGAGTCGACATGGAAGCCGAATCT
GGACCGTGAGGGCGCGATCGCCCTGTGCGCGGAGGCCATCAAGGCCGGTA
TCTTCAACGATCTGGGATCCGGTAGCAATGTCGATGTTTGCGTCATTGAG
AAGGACAAGCCTACGCAGTTGCTGCGGAACTACATCAGGCCTAATGAGCG
TGGCGAGAAGGAGCGCAATTACCGCTTCCCCAAGGGTACTACGGCTTATT
TGAACCAGAAGATCATCAGCAAGGAGGATATGCGGAAGTATATCTCTGTT
GAGGAGGCGTCTGGTGATCCTAATTTGATGGAGGTGGATGTCTAAATTGC
AGCAGATACCAGAGCCACCAGCGGCCCGATAGTAGCAGACAAGATGACAG
GCTTCGATTTCTCCAACTACAACCGTAACGCGGCTCTCCACGCGAAGGGA
GTCCCTCTTCCCAAAGCCACCAGCACCGGTACCACCATCGTGGGATGTAT
ATACGACAATGGCGTTGTGAACTGCGAGAAACTACACTACATCGCGCCCA
AGATCTGGTGCGCCGGAGCCGGAACGGCCGCCGACACCGAGTTCACGACG
GCGTTGATCAGCTCGAACATCGAACTGCACGCACTTTCGACGGGCCGGCC
CCCACGCGTAATCACCTGCATGACGATGCTGAAGCAGCACCTATTCCGAT
ACCAAGGCCACATCGGCGCCTACCTGGTTGTGGCGGGTGTCGATCCCACC
GGCATTGGTCTTTTCACCGTCCACGCCCACGGATCCACCGACAAGCTTCC
CTACGTGACCATGGGATCAGGTTCTCTGGCCGCGATGTCGGTGTTCGAGT
CGACATGGAAGCCGAATCTGGACCGTGAGGGCGCGATCGCCCTGTGCGCG
GAGGCCATCAAGGCCGGTATCTTCAACGATCTGGGATCCGGTAGCAATGT
CGATGTTTGCGTCATTGAGAAGGACAAGCCTACGCAGTTGCTGCGGAACT
ACATCAGGCCTAATGAGCGTGGCGAGAAGGAGCGCAATTACCGCTTCCCC
AAGGGTACTACGGCTTATTTGAACCAGAAGATCATCAGCAAGGAGGATAT
GCGGAAGTATATCTCTGTTGAGGAGGCGTCTGGTGATCCTAATTTGATGG
AGGTGGATGTCTAAATTGCAGCAGATACCAGAGCCACCAGCGGCCCGATA
GTAGCAGACAAGATGACAGGCTTCGATTTCTCCAACTACAACCGTAACGC
GGCTCTCCACGCGAAGGGAGTCCCTCTTCCCAAAGCCACCAGCACCGGTA
CCACCATCGTGGGATGTATATACGACAATGGCGTTGTGAACTGCGAGAAA
CTACACTACATCGCGCCCAAGATCTGGTGCGCCGGAGCCGGAACGGCCGC
CGACACCGAGTTCACGACGGCGTTGATCAGCTCGAACATCGAACTGCACG
CACTTTCGACGGGCCGGCCCCCACGCGTAATCACCTGCATGACGATGCTG
AAGCAGCACCTATTCCGATACCAAGGCCACATCGGCGCCTACCTGGTTGT
GGCGGGTGTCGATCCCACCGGCATTGGTCTTTTCACCGTCCACGCCCACG
GATCCACCGACAAGCTTCCCTACGTGACCATGGGATCAGGTTCTCTGGCC
GCGATGTCGGTGTTCGAGTCGACATGGAAGCCGAATCTGGACCGTGAGGG
CGCGATCGCCCTGTGCGCGGAGGCCATCAAGGCCGGTATCTTCAACGATC
TGGGATCCGGTAGCAATGTCGATGTTTGCGTCATTGAGAAGGACAAGCCT
ACGCAGTTGCTGCGGAACTACATCAGGCCTAATGAGCGTGGCGAGAAGGA
GCGCAATTACCGCTTCCCCAAGGGTACTACGGCTTATTTGAACCAGAAGA
TCATCAGCAAGGAGGATATGCGGAAGTATATCTCTGTTGAGGAGGCGTCT
GGTGATCCTAATTTGATGGAGGTGGATGTCTAAATTGCAGCAGATACCAG
AGCCACCAGCGGCCCGATAGTAGCAGACAAGATGACAGGCTTCGATTTCT
CCAACTACAACCGTAACGCGGCTCTCCACGCGAAGGGAGTCCCTCTTCCC
AAAGCCACCAGCACCGGTACCACCATCGTGGGATGTATATACGACAATGG
CGTTGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PUP1ATCC64974_90600Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_90600-T1ATCC64974_90600-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_90600-T1.cdsATCC64974_90600-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_90600-T1.exon3ATCC64974_90600-T1.exon3Aspergillus niger N402exon
ATCC64974_90600-T1.exon2ATCC64974_90600-T1.exon2Aspergillus niger N402exon
ATCC64974_90600-T1.exon1ATCC64974_90600-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG092641M3
NoteMEROPS:MER0000542
DBxrefInterPro:IPR023333
DBxrefInterPro:IPR024689
DBxrefInterPro:IPR001353
DBxrefInterPro:IPR029055
DBxrefInterPro:IPR000243
DBxrefPFAM:PF12465
DBxrefPFAM:PF00227
Productproteasome core particle subunit beta 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:1232026..1233011 -
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