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ATCC64974_90670-T1, ATCC64974_90670-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_90670-T1
Unique NameATCC64974_90670-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:1252201..1253310+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_90670-T1 ID=ATCC64974_90670-T1|Name=ATCC64974_90670-T1|organism=Aspergillus niger N402|type=mRNA|length=1110bp|location=Sequence derived from alignment at OGUI01000016.1:1252201..1253310+ (Aspergillus niger N402)
ATGCCGTTCCTCGCTGGGAAGAAAATCACTCAGAACGGGTTGGGGCTCAT
GCGTGAGTTTTCCCTCGTTTCCTTTTTCTTTGGTTTCTGTATTATTAGTC
CGGAGGCTTGTCTGCCACTCGAGCTGTCATTGTAAAAGTTCGTATATTGA
TAGAAACATATCGCAGGTTTCACCCTGCCAAACGACGTGACGCCAGATGA
ACAAGCATTCAGAGTCCTCAAGGCAGCGCTGGCAGCCGGCGTCAACGTAT
GGAACGGAGCAGACTTCTACGGGACGCCCGACAGCAACTCATTGCACCTC
ATGAACCGCTACTTCACAGCTTATCCTGAAGACGCGGACAAGGTAGTCCT
TTCGATCAAGTCAGGCGTTGTGAGCATGAAGACCTTCACTATGGACTGCT
CACCCGCGGGACTTCGCGGCTTCGTGGACAACGCTCTCAAGATCCTGGAC
GGCAAGAAAAAGATCGACATTTTCGGCTGCGCGAGGGTTGATCCCAATGT
CCCGGTTGAAGAAAGCATCAAGGCGCTGGCTGAGCTGAAAGAAGAGGGTA
AGATCGGGGGTATCCAGCTGTCGGAGGTAAAAGCTGAGACTATTCGTCGT
GCGGCGAGCGTTGCGAAGATTGATATGCTAGAGGCCGAAGTCAGCCTTTG
GGCTACGGATGTTTTCCGCAATGGTGTCGCAGAGACGTGCGCGGAGCTTG
GTATTCCCATAATAGCCCATACACCGCTGGGAGCGGGGATGTTGACTGGC
ACGATAAAAAGCCCTGATGACTTGGCGGCGCACGATCATCATCGGCTTTT
CCCTCGATTCCAGCCGGATAACCTTGCGAAGAACCGCCTGCTTGTTGATG
AGCTAGAGAAAATTGCGGCTGCGAAGGGGTGCACTCCGGCTCAGTTAGCT
TTGTCATGGATTAAAATGCAGAGCAGAAAGCCTGAATTGCCGCTTTTTGT
CCCGGTTGCGGGTGCAAGATCTGAAGCCAGGGTTTTCGAAAATTTGAAGG
ATGTCGATTTAAGTGACGATGATCTTGCAAAGATTGAGATCCTCCAGGAG
AAATACCCAACCGCAGGGGAGAGATTTCCGCCTGCGGCTATGAAGTTGAA
CGAGTACTAG
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Coding sequence (CDS) from alignment at OGUI01000016.1:1252201..1253310+

>ATCC64974_90670-T1 ID=ATCC64974_90670-T1|Name=ATCC64974_90670-T1|organism=Aspergillus niger N402|type=CDS|length=1992bp|location=Sequence derived from alignment at OGUI01000016.1:1252201..1253310+ (Aspergillus niger N402)
ATGCCGTTCCTCGCTGGGAAGAAAATCACTCAGAACGGGTTGGGGCTCAT
GCGTTTCACCCTGCCAAACGACGTGACGCCAGATGAACAAGCATTCAGAG
TCCTCAAGGCAGCGCTGGCAGCCGGCGTCAACGTATGGAACGGAGCAGAC
TTCTACGGGACGCCCGACAGCAACTCATTGCACCTCATGAACCGCTACTT
CACAGCTTATCCTGAAGACGCGGACAAGGTAGTCCTTTCGATCAAGTCAG
GCGTTGTGAGCATGAAGACCTTCACTATGGACTGCTCACCCGCGGGACTT
CGCGGCTTCGTGGACAACGCTCTCAAGATCCTGGACGGCAAGAAAAAGAT
CGACATTTTCGGCTGCGCGAGGGTTGATCCCAATGTCCCGGTTGAAGAAA
GCATCAAGGCGCTGGCTGAGCTGAAAGAAGAGGGTAAGATCGGGGGTATC
CAGCTGTCGGAGGTAAAAGCTGAGACTATTCGTCGTGCGGCGAGCGTTGC
GAAGATTGATATGCTAGAGGCCGAAGTCAGCCTTTGGGCTACGGATGTTT
TCCGCAATGGTGTCGCAGAGACGTGCGCGGAGCTTGGTATTCCCATAATA
GCCCATACACCGCTGGGAGCGGGGATGTTGACTGGCACGATAAAAAGCCC
TGATGACTTGGCGGCGCACGATCATCATCGGCTTTTCCCTCGATTCCAGC
CGGATAACCTTGCGAAGAACCGCCTGCTTGTTGATGAGCTAGAGAAAATT
GCGGCTGCGAAGGGGTGCACTCCGGCTCAGTTAGCTTTGTCATGGATTAA
AATGCAGAGCAGAAAGCCTGAATTGCCGCTTTTTGTCCCGGTTGCGGGTG
CAAGATCTGAAGCCAGGGTTTTCGAAAATTTGAAGGATGTCGATTTAAGT
GACGATGATCTTGCAAAGATTGAGATCCTCCAGGAGAAATACCCAACCGC
AGGGGAGAGATTTCCGCCTGCGGCTATGAAGTTGAACGAGTACTAGATGC
CGTTCCTCGCTGGGAAGAAAATCACTCAGAACGGGTTGGGGCTCATGCGT
TTCACCCTGCCAAACGACGTGACGCCAGATGAACAAGCATTCAGAGTCCT
CAAGGCAGCGCTGGCAGCCGGCGTCAACGTATGGAACGGAGCAGACTTCT
ACGGGACGCCCGACAGCAACTCATTGCACCTCATGAACCGCTACTTCACA
GCTTATCCTGAAGACGCGGACAAGGTAGTCCTTTCGATCAAGTCAGGCGT
TGTGAGCATGAAGACCTTCACTATGGACTGCTCACCCGCGGGACTTCGCG
GCTTCGTGGACAACGCTCTCAAGATCCTGGACGGCAAGAAAAAGATCGAC
ATTTTCGGCTGCGCGAGGGTTGATCCCAATGTCCCGGTTGAAGAAAGCAT
CAAGGCGCTGGCTGAGCTGAAAGAAGAGGGTAAGATCGGGGGTATCCAGC
TGTCGGAGGTAAAAGCTGAGACTATTCGTCGTGCGGCGAGCGTTGCGAAG
ATTGATATGCTAGAGGCCGAAGTCAGCCTTTGGGCTACGGATGTTTTCCG
CAATGGTGTCGCAGAGACGTGCGCGGAGCTTGGTATTCCCATAATAGCCC
ATACACCGCTGGGAGCGGGGATGTTGACTGGCACGATAAAAAGCCCTGAT
GACTTGGCGGCGCACGATCATCATCGGCTTTTCCCTCGATTCCAGCCGGA
TAACCTTGCGAAGAACCGCCTGCTTGTTGATGAGCTAGAGAAAATTGCGG
CTGCGAAGGGGTGCACTCCGGCTCAGTTAGCTTTGTCATGGATTAAAATG
CAGAGCAGAAAGCCTGAATTGCCGCTTTTTGTCCCGGTTGCGGGTGCAAG
ATCTGAAGCCAGGGTTTTCGAAAATTTGAAGGATGTCGATTTAAGTGACG
ATGATCTTGCAAAGATTGAGATCCTCCAGGAGAAATACCCAACCGCAGGG
GAGAGATTTCCGCCTGCGGCTATGAAGTTGAACGAGTACTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_90670ATCC64974_90670Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_90670-T1.exon1ATCC64974_90670-T1.exon1Aspergillus niger N402exon
ATCC64974_90670-T1.exon2ATCC64974_90670-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_90670-T1.cdsATCC64974_90670-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_90670-T1ATCC64974_90670-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036812
DBxrefInterPro:IPR023210
DBxrefPFAM:PF00248
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:1252201..1253310 +
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