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ATCC64974_9090-T1, ATCC64974_9090-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_9090-T1
Unique NameATCC64974_9090-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:518996..520681-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_9090-T1 ID=ATCC64974_9090-T1|Name=ATCC64974_9090-T1|organism=Aspergillus niger N402|type=mRNA|length=1686bp|location=Sequence derived from alignment at OGUI01000002.1:518996..520681- (Aspergillus niger N402)
ATGTCCTCCGCTCTGGATCGCTCCAGTCGACCACCCATTGGAAGTATACG
TCGAAGGACGAAAAAGGCGTGTGAAACCTGCAAGTTGCGTAAGCGGAAAT
GTGACGGTCATGAGCCATGCTCATTCTGCCTCAAATACGAATATGACTGC
GCGTACGAGGCTCAACCACGGAAGAAGCCATCAAGGCCAAGCATTGCAAG
GCCTTCGACGAAGCCTCTTGAACGGGCATCCTCTCCAGCACTTGCGGCAA
GGGCTGATGTCAATCAACAGCAGATGGAGGCGAACTCAGGCACCGCATTC
CCTCATTTTTTGGGAAAGAGCTTGAACCCGCAGAACCCTCCAAAGGTGCA
CGGCTTCAGCTGGAACCTAGGGCTTCGACATGAGCCCATACAACAATTCG
CTAACATCTCGAGCCTAGTCTCTAAAGATGAGATGAGTGCTCTTGTTGGC
CACTATATAGAACGTATACACCCCATATATGCTGTTCTCGATCTTGATAT
GCTAGAGAAAAAGGTCGGACTGCGCTGGGATAATTCTATCACTTTTGACA
GCTATGATCCAGTTCTTTGCGGTGTTGCGGCGTTGGGATCGCTTTACTCA
GGCGATAATGGACATAGGAACGAAGAAGCGCTGGTCCAGTGCGCAAAGGA
AATCTTGGAAGCAACCTGTACTATGAATAAACCACTCATACACCATGCTA
CTGGATGGGTCTTACGTACCCTCTACCTGCGAAGCACCGGCTGTCCTCAT
ACCTCATGGATGGCCAGCTGCTCTGCAATGCACATCATCGAAGCAGCAGG
GGCACATCAGGATCCAGGGATGATCTCTCTGGTGTATTCTGACACGGCGG
ATGTTGGTGTCCATGAAGAAAGTCAGCGCAGGCTATTTTGGGTTGCGACG
GTTCTAAATACGTGGATCTCTTATGAATATGGCAGGTCTCGCGTCATCTT
ACGAGGCATTTCCTGCAAGCCACCTGTGCCACGAGCGGGAGATTTGACTG
CGGAACTGGTCTCATTGTTCCAGATTTCTCAGCGGCTGGATCCCGATCAG
AACAATAGACCTTCAGACCTTGAAGATGTATTATATCACGTCCAAAGTCT
AACTCTTAGCCACGATGCCTTAGTTCTGTCCCAAGCTAATCTAGCACTTA
CGATATACCGTCGTCTCCGTGTGGCTGCTTCCAGTATTTCAAACGATGTC
ATAAACTGCGTCATTCGAATGGGCAGTGACGGTACTGCTGCTGCGGTCCG
TATGTCTGAGAATCGCAGTCCTTGGTGGCATGTTGCCAATGTTCCCTTTC
AGTTTCTCTGCATCTTGCTCGCAATAGATTCTAAGGAGTCATTGTCACAC
GTGAGCCACGCCATGCGCTCATTCAAGACTATTGGGAGCCACTTTAATAC
GCCTACTGTCCACATCGCTATAGAGACCGTCGATTCCTTAATCAAGCTGT
TACAAAGGAAGAAAGAGCGGGAAATTAATCTTCTAAGGGATAGCATCCAG
GATCAGGACTCAGGACCGTTTGAACGAAACTTATCATCTACGCAAGAGTA
CGGTTCGCCATTGCAAGGAGGCTTATTCGATGGAAACAATCTAGAAATGA
TAGACTGGGATTGGAACGCCTTTTTCGATGCCGAAATACCACTCTTTGAC
GACAGGGGGCATGGCGGGCAGATGAGGTATGGATAA
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Coding sequence (CDS) from alignment at OGUI01000002.1:518996..520681-

>ATCC64974_9090-T1 ID=ATCC64974_9090-T1|Name=ATCC64974_9090-T1|organism=Aspergillus niger N402|type=CDS|length=1686bp|location=Sequence derived from alignment at OGUI01000002.1:518996..520681- (Aspergillus niger N402)
ATGTCCTCCGCTCTGGATCGCTCCAGTCGACCACCCATTGGAAGTATACG
TCGAAGGACGAAAAAGGCGTGTGAAACCTGCAAGTTGCGTAAGCGGAAAT
GTGACGGTCATGAGCCATGCTCATTCTGCCTCAAATACGAATATGACTGC
GCGTACGAGGCTCAACCACGGAAGAAGCCATCAAGGCCAAGCATTGCAAG
GCCTTCGACGAAGCCTCTTGAACGGGCATCCTCTCCAGCACTTGCGGCAA
GGGCTGATGTCAATCAACAGCAGATGGAGGCGAACTCAGGCACCGCATTC
CCTCATTTTTTGGGAAAGAGCTTGAACCCGCAGAACCCTCCAAAGGTGCA
CGGCTTCAGCTGGAACCTAGGGCTTCGACATGAGCCCATACAACAATTCG
CTAACATCTCGAGCCTAGTCTCTAAAGATGAGATGAGTGCTCTTGTTGGC
CACTATATAGAACGTATACACCCCATATATGCTGTTCTCGATCTTGATAT
GCTAGAGAAAAAGGTCGGACTGCGCTGGGATAATTCTATCACTTTTGACA
GCTATGATCCAGTTCTTTGCGGTGTTGCGGCGTTGGGATCGCTTTACTCA
GGCGATAATGGACATAGGAACGAAGAAGCGCTGGTCCAGTGCGCAAAGGA
AATCTTGGAAGCAACCTGTACTATGAATAAACCACTCATACACCATGCTA
CTGGATGGGTCTTACGTACCCTCTACCTGCGAAGCACCGGCTGTCCTCAT
ACCTCATGGATGGCCAGCTGCTCTGCAATGCACATCATCGAAGCAGCAGG
GGCACATCAGGATCCAGGGATGATCTCTCTGGTGTATTCTGACACGGCGG
ATGTTGGTGTCCATGAAGAAAGTCAGCGCAGGCTATTTTGGGTTGCGACG
GTTCTAAATACGTGGATCTCTTATGAATATGGCAGGTCTCGCGTCATCTT
ACGAGGCATTTCCTGCAAGCCACCTGTGCCACGAGCGGGAGATTTGACTG
CGGAACTGGTCTCATTGTTCCAGATTTCTCAGCGGCTGGATCCCGATCAG
AACAATAGACCTTCAGACCTTGAAGATGTATTATATCACGTCCAAAGTCT
AACTCTTAGCCACGATGCCTTAGTTCTGTCCCAAGCTAATCTAGCACTTA
CGATATACCGTCGTCTCCGTGTGGCTGCTTCCAGTATTTCAAACGATGTC
ATAAACTGCGTCATTCGAATGGGCAGTGACGGTACTGCTGCTGCGGTCCG
TATGTCTGAGAATCGCAGTCCTTGGTGGCATGTTGCCAATGTTCCCTTTC
AGTTTCTCTGCATCTTGCTCGCAATAGATTCTAAGGAGTCATTGTCACAC
GTGAGCCACGCCATGCGCTCATTCAAGACTATTGGGAGCCACTTTAATAC
GCCTACTGTCCACATCGCTATAGAGACCGTCGATTCCTTAATCAAGCTGT
TACAAAGGAAGAAAGAGCGGGAAATTAATCTTCTAAGGGATAGCATCCAG
GATCAGGACTCAGGACCGTTTGAACGAAACTTATCATCTACGCAAGAGTA
CGGTTCGCCATTGCAAGGAGGCTTATTCGATGGAAACAATCTAGAAATGA
TAGACTGGGATTGGAACGCCTTTTTCGATGCCGAAATACCACTCTTTGAC
GACAGGGGGCATGGCGGGCAGATGAGGTATGGATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677DNA binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_9090ATCC64974_9090Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9090-T1.cdsATCC64974_9090-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9090-T1.exon1ATCC64974_9090-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9090-T1ATCC64974_9090-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000021.5
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:518996..520681 -
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