You are here

Home

ATCC64974_91380-T1, ATCC64974_91380-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_91380-T1
Unique NameATCC64974_91380-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:1459511..1461172-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_91380-T1 ID=ATCC64974_91380-T1|Name=ATCC64974_91380-T1|organism=Aspergillus niger N402|type=mRNA|length=1662bp|location=Sequence derived from alignment at OGUI01000016.1:1459511..1461172- (Aspergillus niger N402)
ATGCCTGACTCTTACGATTACATCATTGTCGGTGGAGGTCTGACGGGCTG
TGCTTTGGCTGGTCGGCTGGCTGAGAAAGACAAGTCATTACAGATGTTGA
TCATTGAAGCCGGACCCAACGTCGTCGATAATCCTCTCACCAGTACCCCA
TTGGCATGCTTTGGTGCTCATCACTCGCCTTTGGATTGGGACTATACCAC
GGTGCCACAAAAGCATCTCAACAATCGTGAATGCTACAACGCGGCAGGGA
AGGCTCTGGGTGGAGGCACAGCGATAAACTACGGCACCTGGACCCGTGGT
AACGCTGCCGACTACAATCTCTGGGCAAAGCTGGTCGGGGACTCTAGCTG
GAGCTACGAGGGTCTACTTCCTTACTTCAAGCGCGTCGAGACGCATTACG
ATCCTAATGTCGACACGGCAATTCACGGCACCAGCGGCCCCATAACCAAC
ACAATTGTCGCACTCACCAGCCCGGACCGGAAATATCCTCTGAAAGAGCC
AGTCCGCTCTGCATGGGAACGTATTGGCGTCAAGTTCAACCCAGATGCAA
ACGCTGGAAGCCCGCTAGGTCTAGCTCACTTTGGGGAGAACTGGCGTGAA
GGACAGCGTCAGCTTGCCAGTGAGGCATATGGATTGTCTCGGCGTCAAGG
AATATCCATTGTCACTGATACACTGGCGGCAAAGGTAATTTTCCAGGAGC
AAGATGGTCAACAGGTCGCGGCAGGAGTCCAATTGGTCGATGGAGAAGAA
TACCATGCCAGAAGAGAGGTGATCATTTCTGCTGGAACATACCGTACCCC
TCAGCTTCTCATGCTCTCGGGAATTGGGCCCGCAGAAGAGCTGGCAAAAC
ACAGCATCCCACAACTTGTGAACTCTCCAGAAGTGGGTCGAAACTTCCAT
GATCACATGTGTTTCCCCCAATGGTGGAAACTGCGTCACCCCGAACAAGG
TCTCTCTATGGGGACGCCCCTTTGGAACAGTCCCGCATATGGCATGGGGG
TACCTTATGACTGGAACGTGACGCTGCAGACGCCTGCAGAGGAATTGATC
AAAGCATTTCAAGCAGACGACGGGCAAATCCCGCCTAATGATCATCCATA
TCTTGACACGGGCTTTGCGCACTCTGAGGTTCTGGTTATCTACGCACCGA
TGAGTCGCGCTGTGACTGGCTTTGAAACAGCCATGGATGGTACACACATA
AGCACGGCGGTTCTTTTGATGGCTCCGACAGCACGAGGCCAGATCACTCT
GGCCGATGCAGATCCGGCCAGTGCACCTCTCATTGATCCCAACTACTGTT
CCAAGGAAGTGGACCGAGCCATTCTACGAGACGGGATTCGGAGAGTTGCC
AAGCTCATCCTGGACACGCCGGAGGGTCAAGACATGGTGGAGCACGAAGT
GACCAGACCCGGCAATGAACCTATGAGACTCGATTCCACTGACGAGGAAA
TCGACAACAACATCAGAAATGGTGCAATTACATTCTTCCATCCAGGTGGC
TCGGCATCCATGGGCAAGGTAGTGGATACTCAACTGCGGGTGAAGGGCGT
GAAGGGATTGCGTGTTGCGGATGCTAGTGTCCTGCCTGTACCTCTTGCGG
CGCATTATCAGGCTGTCCTTTATGCAGTGGCGGAGAAGGCAGCGGATCTA
CTCTTATACTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:1459511..1461172-

>ATCC64974_91380-T1 ID=ATCC64974_91380-T1|Name=ATCC64974_91380-T1|organism=Aspergillus niger N402|type=CDS|length=1662bp|location=Sequence derived from alignment at OGUI01000016.1:1459511..1461172- (Aspergillus niger N402)
ATGCCTGACTCTTACGATTACATCATTGTCGGTGGAGGTCTGACGGGCTG
TGCTTTGGCTGGTCGGCTGGCTGAGAAAGACAAGTCATTACAGATGTTGA
TCATTGAAGCCGGACCCAACGTCGTCGATAATCCTCTCACCAGTACCCCA
TTGGCATGCTTTGGTGCTCATCACTCGCCTTTGGATTGGGACTATACCAC
GGTGCCACAAAAGCATCTCAACAATCGTGAATGCTACAACGCGGCAGGGA
AGGCTCTGGGTGGAGGCACAGCGATAAACTACGGCACCTGGACCCGTGGT
AACGCTGCCGACTACAATCTCTGGGCAAAGCTGGTCGGGGACTCTAGCTG
GAGCTACGAGGGTCTACTTCCTTACTTCAAGCGCGTCGAGACGCATTACG
ATCCTAATGTCGACACGGCAATTCACGGCACCAGCGGCCCCATAACCAAC
ACAATTGTCGCACTCACCAGCCCGGACCGGAAATATCCTCTGAAAGAGCC
AGTCCGCTCTGCATGGGAACGTATTGGCGTCAAGTTCAACCCAGATGCAA
ACGCTGGAAGCCCGCTAGGTCTAGCTCACTTTGGGGAGAACTGGCGTGAA
GGACAGCGTCAGCTTGCCAGTGAGGCATATGGATTGTCTCGGCGTCAAGG
AATATCCATTGTCACTGATACACTGGCGGCAAAGGTAATTTTCCAGGAGC
AAGATGGTCAACAGGTCGCGGCAGGAGTCCAATTGGTCGATGGAGAAGAA
TACCATGCCAGAAGAGAGGTGATCATTTCTGCTGGAACATACCGTACCCC
TCAGCTTCTCATGCTCTCGGGAATTGGGCCCGCAGAAGAGCTGGCAAAAC
ACAGCATCCCACAACTTGTGAACTCTCCAGAAGTGGGTCGAAACTTCCAT
GATCACATGTGTTTCCCCCAATGGTGGAAACTGCGTCACCCCGAACAAGG
TCTCTCTATGGGGACGCCCCTTTGGAACAGTCCCGCATATGGCATGGGGG
TACCTTATGACTGGAACGTGACGCTGCAGACGCCTGCAGAGGAATTGATC
AAAGCATTTCAAGCAGACGACGGGCAAATCCCGCCTAATGATCATCCATA
TCTTGACACGGGCTTTGCGCACTCTGAGGTTCTGGTTATCTACGCACCGA
TGAGTCGCGCTGTGACTGGCTTTGAAACAGCCATGGATGGTACACACATA
AGCACGGCGGTTCTTTTGATGGCTCCGACAGCACGAGGCCAGATCACTCT
GGCCGATGCAGATCCGGCCAGTGCACCTCTCATTGATCCCAACTACTGTT
CCAAGGAAGTGGACCGAGCCATTCTACGAGACGGGATTCGGAGAGTTGCC
AAGCTCATCCTGGACACGCCGGAGGGTCAAGACATGGTGGAGCACGAAGT
GACCAGACCCGGCAATGAACCTATGAGACTCGATTCCACTGACGAGGAAA
TCGACAACAACATCAGAAATGGTGCAATTACATTCTTCCATCCAGGTGGC
TCGGCATCCATGGGCAAGGTAGTGGATACTCAACTGCGGGTGAAGGGCGT
GAAGGGATTGCGTGTTGCGGATGCTAGTGTCCTGCCTGTACCTCTTGCGG
CGCATTATCAGGCTGTCCTTTATGCAGTGGCGGAGAAGGCAGCGGATCTA
CTCTTATACTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_91380ATCC64974_91380Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_91380-T1.cdsATCC64974_91380-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_91380-T1.exon1ATCC64974_91380-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_91380-T1ATCC64974_91380-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000161.9
NoteEggNog:ENOG41
NoteCAZy:AA3_3
NoteCAZy:AA3
NoteCAZy:AA3_2
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR007867
DBxrefInterPro:IPR000172
DBxrefInterPro:IPR012132
DBxrefPFAM:PF00732
DBxrefPFAM:PF05199
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:1459511..1461172 -
Powered by Drupal