You are here

Home

ATCC64974_9170-T1, ATCC64974_9170-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_9170-T1
Unique NameATCC64974_9170-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:547376..549206+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_9170-T1 ID=ATCC64974_9170-T1|Name=ATCC64974_9170-T1|organism=Aspergillus niger N402|type=mRNA|length=1831bp|location=Sequence derived from alignment at OGUI01000002.1:547376..549206+ (Aspergillus niger N402)
ATGGCAGCTCTCGATGTCAATGGTCCCTTGCCCGAGCTGTCTGAGCAGCA
GCCGGACGATCTCATCCCCGAGTCCCGGGTCCTCATTATCATGACTGGTG
GTACAATCTGTATGCGACAGTCCCCGTCAGGCTTCATTCCTGCCAGAGGT
TTCCAGGAGCAATGTCTGGCCCGGGTGCCGACATTCAACGATGGTTCGCA
CCCGAGCATGATGGATGTTGTGATCAACTCAGACGGAGAGATCAAAGGAC
ATCCCGCTCTCCGCACACCACAGACAGCCTATGGGCGACGGGTGCGGTAC
ACTGTCTTCGAGTTCGAAGAGCTCCTCGATAGCAGTTCTATCGATGCGAA
AGGTTGGGCCCAGATCGCCCACACCGTTGAACGAAACTACACACTTTTCG
ATGGCTTCGTCGTCCTCCACGGAACAGACAGTCTCGCATACACATGCTCA
GCGCTTAGCTTCATGCTGCAGAATCTCGGAAAGCCCGTGATTCTCACTGG
AGCACAGGCGCCCATGCTGGAATTGCAGAATGATGCCACCGATAACCTTC
TCGGATCACTGGTCGTGGCTAGCCATTTCATGATTCCCGAAGTGTGCCTG
TACTTCAACAACCGACTGTTCCGTGGCAACCGGTCGATCAAGGTCGCGGC
CAGTGATTTCGCTGCCTTCGACTCTCCGAATTGCCCCCCGCTGGCGGTGA
CAACCTCCATGCGGACCAACGTGAACTGGGAGCTGGTCAACCGACCGAAG
AGCCTCGAACATTTCCGTATCCAGACCAACCTCGACACCACCCACGTGGC
GTGTCTTCGTATCTTCCCTGGTATCAAGCCGGAGATGGTCGACGCCGTGC
TGAAGCTGGAAGGACTTCGTGGTTTAGTGTTGGAGACGTTTGGCGCCGGT
AACGCACCGAGTGGTCAAGACAATGCCATGACCAATGTGTTGGCCGCCGC
TATCAAGAGAGGAATCGTGATCGTGAATGTCACGCAATGTGAGTAATGAA
ACCCTTGCCAATAATCCCTCAAACCAGAATTCAATCTGACGCAACCAACC
AACCAGGTCTGACGGGAAGTGTCAGCCCAGTCTATGCCCCAGGCATGAGT
CTCTCTCGCGCCGGAGTCGTCGCAGGACTCGACCTGACCACCGAAGCTGC
ACTGACCAAGATGTCGTATCTTCTCGCTCTTCCCGATTCCACCCCAGAAT
GGGTAGCCAAGAAAATGTCAGTATCTCTTCGCGGCGAATTGACCGAGGTA
TCGCAGCCAGTCTTCCGCCACCCGGACGGGGCGCTCCCAGAGCGCGTTCA
GTCCCTCACGGTGCTCGGATACGCCATCGCGCAGGGTGATCTCGAGCGCG
TGGAGGAGATTGTGGCCCGAGAACACCAATGGTTATTGAATGACGCCGAT
TATTCGGGCAACACACCTATCGTAAGGCAACCCCTTGAGCTGTATTTGAG
AAAAAAGAAAAAAAGCAAACTGACACCCACGTCACCTCACAGCACCTCGC
AGCGACATCTCCCTCAATTGAGATTCTCCGATACCTGTTGCTCCAGGGTG
GCTCCGTGCACTTGCGAAACCGCAATGGTCGGACGCCGCTGTTCCTGGCG
GCCAACGCAGGATTCTCGGAGCACGTGCTGCTGCTACGCAAGTCTGGAGC
GCATCTGCACTCTGACGAACGCACGGCGGCGCAGTTGTTGGCCCGGCGCC
GACCTGGCGTCTGGGGGTTGGCGGGGATTGGGCCGCGCGAGGTGAGTGAG
CGCGAGATGGAGGAACTGGAGGACTCGAGTGTGTCTATAGGACGTATGGC
GCAGCGAGTGATGGCGGGATCGGCACCTTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000002.1:547376..549206+

>ATCC64974_9170-T1 ID=ATCC64974_9170-T1|Name=ATCC64974_9170-T1|organism=Aspergillus niger N402|type=CDS|length=5076bp|location=Sequence derived from alignment at OGUI01000002.1:547376..549206+ (Aspergillus niger N402)
ATGGCAGCTCTCGATGTCAATGGTCCCTTGCCCGAGCTGTCTGAGCAGCA
GCCGGACGATCTCATCCCCGAGTCCCGGGTCCTCATTATCATGACTGGTG
GTACAATCTGTATGCGACAGTCCCCGTCAGGCTTCATTCCTGCCAGAGGT
TTCCAGGAGCAATGTCTGGCCCGGGTGCCGACATTCAACGATGGTTCGCA
CCCGAGCATGATGGATGTTGTGATCAACTCAGACGGAGAGATCAAAGGAC
ATCCCGCTCTCCGCACACCACAGACAGCCTATGGGCGACGGGTGCGGTAC
ACTGTCTTCGAGTTCGAAGAGCTCCTCGATAGCAGTTCTATCGATGCGAA
AGGTTGGGCCCAGATCGCCCACACCGTTGAACGAAACTACACACTTTTCG
ATGGCTTCGTCGTCCTCCACGGAACAGACAGTCTCGCATACACATGCTCA
GCGCTTAGCTTCATGCTGCAGAATCTCGGAAAGCCCGTGATTCTCACTGG
AGCACAGGCGCCCATGCTGGAATTGCAGAATGATGCCACCGATAACCTTC
TCGGATCACTGGTCGTGGCTAGCCATTTCATGATTCCCGAAGTGTGCCTG
TACTTCAACAACCGACTGTTCCGTGGCAACCGGTCGATCAAGGTCGCGGC
CAGTGATTTCGCTGCCTTCGACTCTCCGAATTGCCCCCCGCTGGCGGTGA
CAACCTCCATGCGGACCAACGTGAACTGGGAGCTGGTCAACCGACCGAAG
AGCCTCGAACATTTCCGTATCCAGACCAACCTCGACACCACCCACGTGGC
GTGTCTTCGTATCTTCCCTGGTATCAAGCCGGAGATGGTCGACGCCGTGC
TGAAGCTGGAAGGACTTCGTGGTTTAGTGTTGGAGACGTTTGGCGCCGGT
AACGCACCGAGTGGTCAAGACAATGCCATGACCAATGTGTTGGCCGCCGC
TATCAAGAGAGGAATCGTGATCGTGAATGTCACGCAATGTCTGACGGGAA
GTGTCAGCCCAGTCTATGCCCCAGGCATGAGTCTCTCTCGCGCCGGAGTC
GTCGCAGGACTCGACCTGACCACCGAAGCTGCACTGACCAAGATGTCGTA
TCTTCTCGCTCTTCCCGATTCCACCCCAGAATGGGTAGCCAAGAAAATGT
CAGTATCTCTTCGCGGCGAATTGACCGAGGTATCGCAGCCAGTCTTCCGC
CACCCGGACGGGGCGCTCCCAGAGCGCGTTCAGTCCCTCACGGTGCTCGG
ATACGCCATCGCGCAGGGTGATCTCGAGCGCGTGGAGGAGATTGTGGCCC
GAGAACACCAATGGTTATTGAATGACGCCGATTATTCGGGCAACACACCT
ATCCACCTCGCAGCGACATCTCCCTCAATTGAGATTCTCCGATACCTGTT
GCTCCAGGGTGGCTCCGTGCACTTGCGAAACCGCAATGGTCGGACGCCGC
TGTTCCTGGCGGCCAACGCAGGATTCTCGGAGCACGTGCTGCTGCTACGC
AAGTCTGGAGCGCATCTGCACTCTGACGAACGCACGGCGGCGCAGTTGTT
GGCCCGGCGCCGACCTGGCGTCTGGGGGTTGGCGGGGATTGGGCCGCGCG
AGGTGAGTGAGCGCGAGATGGAGGAACTGGAGGACTCGAGTGTGTCTATA
GGACGTATGGCGCAGCGAGTGATGGCGGGATCGGCACCTTGAATGGCAGC
TCTCGATGTCAATGGTCCCTTGCCCGAGCTGTCTGAGCAGCAGCCGGACG
ATCTCATCCCCGAGTCCCGGGTCCTCATTATCATGACTGGTGGTACAATC
TGTATGCGACAGTCCCCGTCAGGCTTCATTCCTGCCAGAGGTTTCCAGGA
GCAATGTCTGGCCCGGGTGCCGACATTCAACGATGGTTCGCACCCGAGCA
TGATGGATGTTGTGATCAACTCAGACGGAGAGATCAAAGGACATCCCGCT
CTCCGCACACCACAGACAGCCTATGGGCGACGGGTGCGGTACACTGTCTT
CGAGTTCGAAGAGCTCCTCGATAGCAGTTCTATCGATGCGAAAGGTTGGG
CCCAGATCGCCCACACCGTTGAACGAAACTACACACTTTTCGATGGCTTC
GTCGTCCTCCACGGAACAGACAGTCTCGCATACACATGCTCAGCGCTTAG
CTTCATGCTGCAGAATCTCGGAAAGCCCGTGATTCTCACTGGAGCACAGG
CGCCCATGCTGGAATTGCAGAATGATGCCACCGATAACCTTCTCGGATCA
CTGGTCGTGGCTAGCCATTTCATGATTCCCGAAGTGTGCCTGTACTTCAA
CAACCGACTGTTCCGTGGCAACCGGTCGATCAAGGTCGCGGCCAGTGATT
TCGCTGCCTTCGACTCTCCGAATTGCCCCCCGCTGGCGGTGACAACCTCC
ATGCGGACCAACGTGAACTGGGAGCTGGTCAACCGACCGAAGAGCCTCGA
ACATTTCCGTATCCAGACCAACCTCGACACCACCCACGTGGCGTGTCTTC
GTATCTTCCCTGGTATCAAGCCGGAGATGGTCGACGCCGTGCTGAAGCTG
GAAGGACTTCGTGGTTTAGTGTTGGAGACGTTTGGCGCCGGTAACGCACC
GAGTGGTCAAGACAATGCCATGACCAATGTGTTGGCCGCCGCTATCAAGA
GAGGAATCGTGATCGTGAATGTCACGCAATGTCTGACGGGAAGTGTCAGC
CCAGTCTATGCCCCAGGCATGAGTCTCTCTCGCGCCGGAGTCGTCGCAGG
ACTCGACCTGACCACCGAAGCTGCACTGACCAAGATGTCGTATCTTCTCG
CTCTTCCCGATTCCACCCCAGAATGGGTAGCCAAGAAAATGTCAGTATCT
CTTCGCGGCGAATTGACCGAGGTATCGCAGCCAGTCTTCCGCCACCCGGA
CGGGGCGCTCCCAGAGCGCGTTCAGTCCCTCACGGTGCTCGGATACGCCA
TCGCGCAGGGTGATCTCGAGCGCGTGGAGGAGATTGTGGCCCGAGAACAC
CAATGGTTATTGAATGACGCCGATTATTCGGGCAACACACCTATCCACCT
CGCAGCGACATCTCCCTCAATTGAGATTCTCCGATACCTGTTGCTCCAGG
GTGGCTCCGTGCACTTGCGAAACCGCAATGGTCGGACGCCGCTGTTCCTG
GCGGCCAACGCAGGATTCTCGGAGCACGTGCTGCTGCTACGCAAGTCTGG
AGCGCATCTGCACTCTGACGAACGCACGGCGGCGCAGTTGTTGGCCCGGC
GCCGACCTGGCGTCTGGGGGTTGGCGGGGATTGGGCCGCGCGAGGTGAGT
GAGCGCGAGATGGAGGAACTGGAGGACTCGAGTGTGTCTATAGGACGTAT
GGCGCAGCGAGTGATGGCGGGATCGGCACCTTGAATGGCAGCTCTCGATG
TCAATGGTCCCTTGCCCGAGCTGTCTGAGCAGCAGCCGGACGATCTCATC
CCCGAGTCCCGGGTCCTCATTATCATGACTGGTGGTACAATCTGTATGCG
ACAGTCCCCGTCAGGCTTCATTCCTGCCAGAGGTTTCCAGGAGCAATGTC
TGGCCCGGGTGCCGACATTCAACGATGGTTCGCACCCGAGCATGATGGAT
GTTGTGATCAACTCAGACGGAGAGATCAAAGGACATCCCGCTCTCCGCAC
ACCACAGACAGCCTATGGGCGACGGGTGCGGTACACTGTCTTCGAGTTCG
AAGAGCTCCTCGATAGCAGTTCTATCGATGCGAAAGGTTGGGCCCAGATC
GCCCACACCGTTGAACGAAACTACACACTTTTCGATGGCTTCGTCGTCCT
CCACGGAACAGACAGTCTCGCATACACATGCTCAGCGCTTAGCTTCATGC
TGCAGAATCTCGGAAAGCCCGTGATTCTCACTGGAGCACAGGCGCCCATG
CTGGAATTGCAGAATGATGCCACCGATAACCTTCTCGGATCACTGGTCGT
GGCTAGCCATTTCATGATTCCCGAAGTGTGCCTGTACTTCAACAACCGAC
TGTTCCGTGGCAACCGGTCGATCAAGGTCGCGGCCAGTGATTTCGCTGCC
TTCGACTCTCCGAATTGCCCCCCGCTGGCGGTGACAACCTCCATGCGGAC
CAACGTGAACTGGGAGCTGGTCAACCGACCGAAGAGCCTCGAACATTTCC
GTATCCAGACCAACCTCGACACCACCCACGTGGCGTGTCTTCGTATCTTC
CCTGGTATCAAGCCGGAGATGGTCGACGCCGTGCTGAAGCTGGAAGGACT
TCGTGGTTTAGTGTTGGAGACGTTTGGCGCCGGTAACGCACCGAGTGGTC
AAGACAATGCCATGACCAATGTGTTGGCCGCCGCTATCAAGAGAGGAATC
GTGATCGTGAATGTCACGCAATGTCTGACGGGAAGTGTCAGCCCAGTCTA
TGCCCCAGGCATGAGTCTCTCTCGCGCCGGAGTCGTCGCAGGACTCGACC
TGACCACCGAAGCTGCACTGACCAAGATGTCGTATCTTCTCGCTCTTCCC
GATTCCACCCCAGAATGGGTAGCCAAGAAAATGTCAGTATCTCTTCGCGG
CGAATTGACCGAGGTATCGCAGCCAGTCTTCCGCCACCCGGACGGGGCGC
TCCCAGAGCGCGTTCAGTCCCTCACGGTGCTCGGATACGCCATCGCGCAG
GGTGATCTCGAGCGCGTGGAGGAGATTGTGGCCCGAGAACACCAATGGTT
ATTGAATGACGCCGATTATTCGGGCAACACACCTATCCACCTCGCAGCGA
CATCTCCCTCAATTGAGATTCTCCGATACCTGTTGCTCCAGGGTGGCTCC
GTGCACTTGCGAAACCGCAATGGTCGGACGCCGCTGTTCCTGGCGGCCAA
CGCAGGATTCTCGGAGCACGTGCTGCTGCTACGCAAGTCTGGAGCGCATC
TGCACTCTGACGAACGCACGGCGGCGCAGTTGTTGGCCCGGCGCCGACCT
GGCGTCTGGGGGTTGGCGGGGATTGGGCCGCGCGAGGTGAGTGAGCGCGA
GATGGAGGAACTGGAGGACTCGAGTGTGTCTATAGGACGTATGGCGCAGC
GAGTGATGGCGGGATCGGCACCTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_9170ATCC64974_9170Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9170-T1.exon1ATCC64974_9170-T1.exon1Aspergillus niger N402exon
ATCC64974_9170-T1.exon2ATCC64974_9170-T1.exon2Aspergillus niger N402exon
ATCC64974_9170-T1.exon3ATCC64974_9170-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9170-T1.cdsATCC64974_9170-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9170-T1ATCC64974_9170-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036152
DBxrefInterPro:IPR041725
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR027474
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR027473
DBxrefInterPro:IPR040919
DBxrefInterPro:IPR037152
DBxrefInterPro:IPR002110
DBxrefInterPro:IPR006034
DBxrefPFAM:PF17763
DBxrefPFAM:PF00710
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:547376..549206 +
Powered by Drupal