You are here

ATCC64974_92030-T1, ATCC64974_92030-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_92030-T1
Unique NameATCC64974_92030-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:1637259..1637852-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_92030-T1 ID=ATCC64974_92030-T1|Name=ATCC64974_92030-T1|organism=Aspergillus niger N402|type=mRNA|length=594bp|location=Sequence derived from alignment at OGUI01000016.1:1637259..1637852- (Aspergillus niger N402)
ATGGCTCCCCAGAAGCAAATGGTCCTCAAGTTGACCTCCTTCCGCTACAA GAAGGAGGGCATCTCTGAGAAAGAATTCCACGAATATGCCAGCAAGTCGC ATGCTCCTAAGGCAGCCATCGTACAGGCTCGCCATGGCGCCATCAAAGTG TGCCAGGTTTGTTGATCCCTTTTGCCAAGCCCCCCGCTGGGTACCTCTTA GTTTCCACAAAGTTTCCTTTGGAAACGATAAGCTGACCAGGAAATGTCCG AGCAGTACCACACCCCTAGCGCTAGCAAGAGGCTTATCACAGAGAAGATC CCCTGGGCCGTACGTCCAGGCTGGGAGATTGAAGATCACGACATCATGGT GTCCGTGTACGTGCCGAACGCGGAGACCGCGCAGGCAATTGTAACGGACC CGGACTTCCAGAGCCTCGTGGCTGGGGAGGATGAGATCTGTGACCAGACC CGCGCCAAGTTGACTGCAGGGTGGGAGGAGGTGTTTGTGGAGGATGGAAA GGTAGTGGGAGAGGACTACGGTAGCTTTGAGGAGCTCACTAGCCTTGGTC ACGATAGCAAGACCACATCGGCTCCCGAGGGCATCCGCATCTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:1637259..1637852-

>ATCC64974_92030-T1 ID=ATCC64974_92030-T1|Name=ATCC64974_92030-T1|organism=Aspergillus niger N402|type=CDS|length=990bp|location=Sequence derived from alignment at OGUI01000016.1:1637259..1637852- (Aspergillus niger N402)
TACCACACCCCTAGCGCTAGCAAGAGGCTTATCACAGAGAAGATCCCCTG
GGCCGTACGTCCAGGCTGGGAGATTGAAGATCACGACATCATGGTGTCCG
TGTACGTGCCGAACGCGGAGACCGCGCAGGCAATTGTAACGGACCCGGAC
TTCCAGAGCCTCGTGGCTGGGGAGGATGAGATCTGTGACCAGACCCGCGC
CAAGTTGACTGCAGGGTGGGAGGAGGTGTTTGTGGAGGATGGAAAGGTAG
TGGGAGAGGACTACGGTAGCTTTGAGGAGCTCACTAGCCTTGGTCACGAT
AGCAAGACCACATCGGCTCCCGAGGGCATCCGCATCTAGATGGCTCCCCA
GAAGCAAATGGTCCTCAAGTTGACCTCCTTCCGCTACAAGAAGGAGGGCA
TCTCTGAGAAAGAATTCCACGAATATGCCAGCAAGTCGCATGCTCCTAAG
GCAGCCATCGTACAGGCTCGCCATGGCGCCATCAAAGTGTGCCAGTACCA
CACCCCTAGCGCTAGCAAGAGGCTTATCACAGAGAAGATCCCCTGGGCCG
TACGTCCAGGCTGGGAGATTGAAGATCACGACATCATGGTGTCCGTGTAC
GTGCCGAACGCGGAGACCGCGCAGGCAATTGTAACGGACCCGGACTTCCA
GAGCCTCGTGGCTGGGGAGGATGAGATCTGTGACCAGACCCGCGCCAAGT
TGACTGCAGGGTGGGAGGAGGTGTTTGTGGAGGATGGAAAGGTAGTGGGA
GAGGACTACGGTAGCTTTGAGGAGCTCACTAGCCTTGGTCACGATAGCAA
GACCACATCGGCTCCCGAGGGCATCCGCATCTAGATGGCTCCCCAGAAGC
AAATGGTCCTCAAGTTGACCTCCTTCCGCTACAAGAAGGAGGGCATCTCT
GAGAAAGAATTCCACGAATATGCCAGCAAGTCGCATGCTCCTAAGGCAGC
CATCGTACAGGCTCGCCATGGCGCCATCAAAGTGTGCCAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_92030ATCC64974_92030Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_92030-T1ATCC64974_92030-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_92030-T1.cdsATCC64974_92030-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_92030-T1.exon2ATCC64974_92030-T1.exon2Aspergillus niger N402exon
ATCC64974_92030-T1.exon1ATCC64974_92030-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000161.11
NoteantiSMASH:Cluster_10000161.12
NoteEggNog:ENOG41
DBxrefInterPro:IPR011008
DBxrefInterPro:IPR009799
DBxrefPFAM:PF07110
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:1637259..1637852 -