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ATCC64974_92380-T1, ATCC64974_92380-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_92380-T1
Unique NameATCC64974_92380-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:1736773..1737539-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_92380-T1 ID=ATCC64974_92380-T1|Name=ATCC64974_92380-T1|organism=Aspergillus niger N402|type=mRNA|length=767bp|location=Sequence derived from alignment at OGUI01000016.1:1736773..1737539- (Aspergillus niger N402)
ATGATAACAGTAAGTGCACTCAGTCTTTTGCCACCGACCATCGGACACTG
ACTTTGATTTGCAGTGTATGCAGACTCTGCTTGTCCTACAATCGTCATAT
GCACGATTGATATTGACTGCTCGCTTTGTTAGGCAAGAGTTCTACGTGCG
TTTTAAGGGACCTGAAGAGAGTAAGATCCATACAATTTCCGACTATGGCA
AATCAAACCTGCTGACATAGCCAGCACCCTTCGCCGGTGGCCACTGGAAG
ATCCACGTCGAACTACCCGACCAGTACCCATACAAGAGCCCGAGTATCGG
ATTTGTGAACCGGATATTCCACCCGAACATCGATGAGCTGTAAGACAACT
TCGACAAATCTTGTGTCCAACGGCTAACCCCAGCTGCCCAGGTCGGGTTC
CGTTTGTTTGGATGTCATAAATCAAACATGGTCGCCCATGTACGATATGA
TCAACATCTTCGAGGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCT
TCGGACCCTCTCAACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAA
GAGCTACGAGGCAAAGGTCAAGGGTACGTTGCCACATCATATGCGACATA
CTTCGTCATATTTAGCTGACATGTCACCAGAGTACGTGGCCAAGTACGCC
AGCAAAGAGGCTGTCGATGAAGCCGGGGAAGACACAGAGTCAGAAGACGA
ATTGAGCTCGGCAGGCAGTTACGAGTCCGGCGGCGAAGAGCCAGCCGGTA
CGATGGACGACGTCTAA
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Coding sequence (CDS) from alignment at OGUI01000016.1:1736773..1737539-

>ATCC64974_92380-T1 ID=ATCC64974_92380-T1|Name=ATCC64974_92380-T1|organism=Aspergillus niger N402|type=CDS|length=2745bp|location=Sequence derived from alignment at OGUI01000016.1:1736773..1737539- (Aspergillus niger N402)
AGTACGTGGCCAAGTACGCCAGCAAAGAGGCTGTCGATGAAGCCGGGGAA
GACACAGAGTCAGAAGACGAATTGAGCTCGGCAGGCAGTTACGAGTCCGG
CGGCGAAGAGCCAGCCGGTACGATGGACGACGTCTAAGTCGGGTTCCGTT
TGTTTGGATGTCATAAATCAAACATGGTCGCCCATGTACGATATGATCAA
CATCTTCGAGGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCTTCGG
ACCCTCTCAACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAAGAGC
TACGAGGCAAAGGTCAAGGCACCCTTCGCCGGTGGCCACTGGAAGATCCA
CGTCGAACTACCCGACCAGTACCCATACAAGAGCCCGAGTATCGGATTTG
TGAACCGGATATTCCACCCGAACATCGATGAGCTTGTATGCAGACTCTGC
TTGTCCTACAATCGTCATATGCACGATTGATATTGACTGCTCGCTTTGTT
AGGCAAGAGTTCTACGTGCGTTTTAAGGGACCTGAAGAGAATGATAACAA
GTACGTGGCCAAGTACGCCAGCAAAGAGGCTGTCGATGAAGCCGGGGAAG
ACACAGAGTCAGAAGACGAATTGAGCTCGGCAGGCAGTTACGAGTCCGGC
GGCGAAGAGCCAGCCGGTACGATGGACGACGTCTAAGTCGGGTTCCGTTT
GTTTGGATGTCATAAATCAAACATGGTCGCCCATGTACGATATGATCAAC
ATCTTCGAGGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCTTCGGA
CCCTCTCAACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAAGAGCT
ACGAGGCAAAGGTCAAGGCACCCTTCGCCGGTGGCCACTGGAAGATCCAC
GTCGAACTACCCGACCAGTACCCATACAAGAGCCCGAGTATCGGATTTGT
GAACCGGATATTCCACCCGAACATCGATGAGCTTGTATGCAGACTCTGCT
TGTCCTACAATCGTCATATGCACGATTGATATTGACTGCTCGCTTTGTTA
GGCAAGAGTTCTACGTGCGTTTTAAGGGACCTGAAGAGAATGATAACAAG
TACGTGGCCAAGTACGCCAGCAAAGAGGCTGTCGATGAAGCCGGGGAAGA
CACAGAGTCAGAAGACGAATTGAGCTCGGCAGGCAGTTACGAGTCCGGCG
GCGAAGAGCCAGCCGGTACGATGGACGACGTCTAAGTCGGGTTCCGTTTG
TTTGGATGTCATAAATCAAACATGGTCGCCCATGTACGATATGATCAACA
TCTTCGAGGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCTTCGGAC
CCTCTCAACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAAGAGCTA
CGAGGCAAAGGTCAAGGCACCCTTCGCCGGTGGCCACTGGAAGATCCACG
TCGAACTACCCGACCAGTACCCATACAAGAGCCCGAGTATCGGATTTGTG
AACCGGATATTCCACCCGAACATCGATGAGCTTGTATGCAGACTCTGCTT
GTCCTACAATCGTCATATGCACGATTGATATTGACTGCTCGCTTTGTTAG
GCAAGAGTTCTACGTGCGTTTTAAGGGACCTGAAGAGAATGATAACAAGT
ACGTGGCCAAGTACGCCAGCAAAGAGGCTGTCGATGAAGCCGGGGAAGAC
ACAGAGTCAGAAGACGAATTGAGCTCGGCAGGCAGTTACGAGTCCGGCGG
CGAAGAGCCAGCCGGTACGATGGACGACGTCTAAGTCGGGTTCCGTTTGT
TTGGATGTCATAAATCAAACATGGTCGCCCATGTACGATATGATCAACAT
CTTCGAGGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCTTCGGACC
CTCTCAACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAAGAGCTAC
GAGGCAAAGGTCAAGGCACCCTTCGCCGGTGGCCACTGGAAGATCCACGT
CGAACTACCCGACCAGTACCCATACAAGAGCCCGAGTATCGGATTTGTGA
ACCGGATATTCCACCCGAACATCGATGAGCTTGTATGCAGACTCTGCTTG
TCCTACAATCGTCATATGCACGATTGATATTGACTGCTCGCTTTGTTAGG
CAAGAGTTCTACGTGCGTTTTAAGGGACCTGAAGAGAATGATAACAAGTA
CGTGGCCAAGTACGCCAGCAAAGAGGCTGTCGATGAAGCCGGGGAAGACA
CAGAGTCAGAAGACGAATTGAGCTCGGCAGGCAGTTACGAGTCCGGCGGC
GAAGAGCCAGCCGGTACGATGGACGACGTCTAAGTCGGGTTCCGTTTGTT
TGGATGTCATAAATCAAACATGGTCGCCCATGTACGATATGATCAACATC
TTCGAGGTCTTCCTTCCTCAGCTCCTGCGCTACCCCAACCCTTCGGACCC
TCTCAACGGCGAAGCAGCTGCTATGCTCATGCGGGAGCCAAAGAGCTACG
AGGCAAAGGTCAAGGCACCCTTCGCCGGTGGCCACTGGAAGATCCACGTC
GAACTACCCGACCAGTACCCATACAAGAGCCCGAGTATCGGATTTGTGAA
CCGGATATTCCACCCGAACATCGATGAGCTTGTATGCAGACTCTGCTTGT
CCTACAATCGTCATATGCACGATTGATATTGACTGCTCGCTTTGTTAGGC
AAGAGTTCTACGTGCGTTTTAAGGGACCTGAAGAGAATGATAACA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBC8ATCC64974_92380Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_92380-T1ATCC64974_92380-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_92380-T1.cdsATCC64974_92380-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_92380-T1.exon5ATCC64974_92380-T1.exon5Aspergillus niger N402exon
ATCC64974_92380-T1.exon4ATCC64974_92380-T1.exon4Aspergillus niger N402exon
ATCC64974_92380-T1.exon3ATCC64974_92380-T1.exon3Aspergillus niger N402exon
ATCC64974_92380-T1.exon2ATCC64974_92380-T1.exon2Aspergillus niger N402exon
ATCC64974_92380-T1.exon1ATCC64974_92380-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09264Z1B
DBxrefInterPro:IPR023313
DBxrefInterPro:IPR016135
DBxrefInterPro:IPR000608
DBxrefPFAM:PF00179
ProductUbiquitin-conjugating enzyme E2 8
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:1736773..1737539 -
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