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ATCC64974_92390-T1, ATCC64974_92390-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_92390-T1
Unique NameATCC64974_92390-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:1739421..1740177+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_92390-T1 ID=ATCC64974_92390-T1|Name=ATCC64974_92390-T1|organism=Aspergillus niger N402|type=mRNA|length=757bp|location=Sequence derived from alignment at OGUI01000016.1:1739421..1740177+ (Aspergillus niger N402)
ATGGATTCCCCTTCGCCCCAGGGCCCCTCGGCCCAAAACTCACCCAAACC
CGACCAGGCCAAACTCGCTCACAGGCCAGCCAATCGTAAACAATCTTCTG
ATTCTTCCTCGAATACCCAAAATGCACCTATACCAGACGACAAGCACGGT
GCGGACTTACCAATGACCATGTCCGCCTCGGTGGTGCTAACCAGCTTACC
CCGCGATGCCCACCAAGCATTGGCGGATGCTGAGGCTGTCGATAGGGGCA
AAGGCAAGTAAAACCCTCTAGTCATCATCTACTACGAGTGCTATCACGTA
TCCACTGCCTCGAATTGTTTTGAATTCTTTCTCGCTCGAAAGTCAGCTTT
TCCGAGCTCCAAACTGGCCCCTCACTTTCCTAGTAACGTCATGTGGCTTA
TCGGGACAAGCCATATACTTGTCCGGAAACTAACGATGCAGCAGTTACCG
TGCGCTTTCAGCCACTGCCTTCAGCTCCCATCCTGAAGAACCGCGTGTTC
AAGATTAGTGCCTCGCAAAAGTTCGAAACAGTCGTGAAATTTCTCAGGAA
GAAGCTGGACTGTAAAGAATCCGACTCGGTTTTCTGTTATGTCAACAGTG
TATTTGCCCCTGGGTTAGACGAAGGTGTTGGTGGGTTGTGGAGGGTAAGC
CGCCTTGATACGTGGATTCGAGCCACCCATTTACTGACAGCATTCAGTGT
TTCAAGACTGACGAGCAACTTATCGTCGCTTACTCTATGACGCCCGCTTT
TGGCTGA
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Coding sequence (CDS) from alignment at OGUI01000016.1:1739421..1740177+

>ATCC64974_92390-T1 ID=ATCC64974_92390-T1|Name=ATCC64974_92390-T1|organism=Aspergillus niger N402|type=CDS|length=1539bp|location=Sequence derived from alignment at OGUI01000016.1:1739421..1740177+ (Aspergillus niger N402)
ATGGATTCCCCTTCGCCCCAGGGCCCCTCGGCCCAAAACTCACCCAAACC
CGACCAGGCCAAACTCGCTCACAGGCCAGCCAATCGTAAACAATCTTCTG
ATTCTTCCTCGAATACCCAAAATGCACCTATACCAGACGACAAGCACGGT
GCGGACTTACCAATGACCATGTCCGCCTCGGTGGTGCTAACCAGCTTACC
CCGCGATGCCCACCAAGCATTGGCGGATGCTGAGGCTGTCGATAGGGGCA
AAGTTACCGTGCGCTTTCAGCCACTGCCTTCAGCTCCCATCCTGAAGAAC
CGCGTGTTCAAGATTAGTGCCTCGCAAAAGTTCGAAACAGTCGTGAAATT
TCTCAGGAAGAAGCTGGACTGTAAAGAATCCGACTCGGTTTTCTGTTATG
TCAACAGTGTATTTGCCCCTGGGTTAGACGAAGGTGTTGGTGGGTTGTGG
AGGTGTTTCAAGACTGACGAGCAACTTATCGTCGCTTACTCTATGACGCC
CGCTTTTGGCTGAATGGATTCCCCTTCGCCCCAGGGCCCCTCGGCCCAAA
ACTCACCCAAACCCGACCAGGCCAAACTCGCTCACAGGCCAGCCAATCGT
AAACAATCTTCTGATTCTTCCTCGAATACCCAAAATGCACCTATACCAGA
CGACAAGCACGGTGCGGACTTACCAATGACCATGTCCGCCTCGGTGGTGC
TAACCAGCTTACCCCGCGATGCCCACCAAGCATTGGCGGATGCTGAGGCT
GTCGATAGGGGCAAAGTTACCGTGCGCTTTCAGCCACTGCCTTCAGCTCC
CATCCTGAAGAACCGCGTGTTCAAGATTAGTGCCTCGCAAAAGTTCGAAA
CAGTCGTGAAATTTCTCAGGAAGAAGCTGGACTGTAAAGAATCCGACTCG
GTTTTCTGTTATGTCAACAGTGTATTTGCCCCTGGGTTAGACGAAGGTGT
TGGTGGGTTGTGGAGGTGTTTCAAGACTGACGAGCAACTTATCGTCGCTT
ACTCTATGACGCCCGCTTTTGGCTGAATGGATTCCCCTTCGCCCCAGGGC
CCCTCGGCCCAAAACTCACCCAAACCCGACCAGGCCAAACTCGCTCACAG
GCCAGCCAATCGTAAACAATCTTCTGATTCTTCCTCGAATACCCAAAATG
CACCTATACCAGACGACAAGCACGGTGCGGACTTACCAATGACCATGTCC
GCCTCGGTGGTGCTAACCAGCTTACCCCGCGATGCCCACCAAGCATTGGC
GGATGCTGAGGCTGTCGATAGGGGCAAAGTTACCGTGCGCTTTCAGCCAC
TGCCTTCAGCTCCCATCCTGAAGAACCGCGTGTTCAAGATTAGTGCCTCG
CAAAAGTTCGAAACAGTCGTGAAATTTCTCAGGAAGAAGCTGGACTGTAA
AGAATCCGACTCGGTTTTCTGTTATGTCAACAGTGTATTTGCCCCTGGGT
TAGACGAAGGTGTTGGTGGGTTGTGGAGGTGTTTCAAGACTGACGAGCAA
CTTATCGTCGCTTACTCTATGACGCCCGCTTTTGGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0000045autophagosome assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG12ATCC64974_92390Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_92390-T1.exon1ATCC64974_92390-T1.exon1Aspergillus niger N402exon
ATCC64974_92390-T1.exon2ATCC64974_92390-T1.exon2Aspergillus niger N402exon
ATCC64974_92390-T1.exon3ATCC64974_92390-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_92390-T1.cdsATCC64974_92390-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_92390-T1ATCC64974_92390-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265EKJ
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR007242
DBxrefPFAM:PF04110
ProductUbiquitin-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:1739421..1740177 +
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