You are here

Home

ATCC64974_92900-T1, ATCC64974_92900-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_92900-T1
Unique NameATCC64974_92900-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:1889146..1890305+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_92900-T1 ID=ATCC64974_92900-T1|Name=ATCC64974_92900-T1|organism=Aspergillus niger N402|type=mRNA|length=1160bp|location=Sequence derived from alignment at OGUI01000016.1:1889146..1890305+ (Aspergillus niger N402)
ATGTTGGGGAAGAGATTGTTCTCCACGTTTCGGAGCTTGCAGCATGAGAA
CCCACTGGTACGCTCTCTTCTTCCTATTTCAATGGCATGTTTGGTGTTAA
TCTGGTGAATACAGGGCCTCCCTCGCTCCGGTACGCCGCCGTCTCTCCGA
AGTCGTCGCGGTCTCCCCGAGAAGCGCAAGATCCGCGATGTGAAGAAGGT
TATTGCTGTGTCTTCGGCGAAGGGCGGTGTTGGGAAGTCGACGATAGCGG
GTATGCCTCTATACCAATATATATCTTACATCAATCAGACGAGATACTTA
TGTTCCTATTATCAACAGTCAACCTCGCTCTCGCCTTCGCCCGCCGCGGC
ATTCGCACCGGCATCCTCGACACCGACATCTTCGGTCCATCCATTCCAAC
CCTGTTGAATCTATCCGGCGAGCCTAGATTAGACGATAGTGCGTGCTCCC
ATCTCCCCTACGCAACACATAACTAACGCCTCTGACCTCCAACAGAAAAC
TGCCTCCTCCCCCTAACCAACTACGGCCTCAAATCCATGTCCATGGGCTA
CCTCCTCCCCAGCACCCAACCACCCCCGAACACCGATCCAACCGAGCGAG
CCCCCATGGACCCGACCCCCATTTCCTGGCGTGGCCTAATGGTCACCAAA
GCGATGCACCAACTCCTCCACTCCGTATCCTGGGGTCCACTCGACGTTCT
CTTCCTCGACTTGCCCCCGGGCACCGGCGACGTGCAACTCACCATCAACC
AGGAAATTATCCTCGATGGGGCAGTGATCGTGACCACGCCGCAGGATATC
GCGCTACGGGATGCGGTGCGCGGAATTGGCATGTTCCAGCGCATGGATGT
GCCGGTGCTGGGGATGGTGAGGAATATGGCGTTCTTTGCGTGCCCGGAGT
GTGGGACGCAGACGAAGATCTTTTCGCAGGGGAGGCATGTCCATGAGGGG
GCGGATTGGGGGGTTGAGGCCGAGTGTAGGAGGCTCGGTGTTGGGTTTTT
GGGTGATGTGCCGCTGGATGCGAGGGTTTGTGAGGATGCGGACCGCGGGG
TGCCGAGTGTGGTTGCTGAGGAGGGGAAGGAGGGCAAGGAGGGGGTTAGG
AGGAAGGCGTTTTTGGATGTTGCGGAGCAGGTTGCGAAGAAGGTGGGAAT
TGAGTGGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:1889146..1890305+

>ATCC64974_92900-T1 ID=ATCC64974_92900-T1|Name=ATCC64974_92900-T1|organism=Aspergillus niger N402|type=CDS|length=3912bp|location=Sequence derived from alignment at OGUI01000016.1:1889146..1890305+ (Aspergillus niger N402)
ATGTTGGGGAAGAGATTGTTCTCCACGTTTCGGAGCTTGCAGCATGAGAA
CCCACTGGGCCTCCCTCGCTCCGGTACGCCGCCGTCTCTCCGAAGTCGTC
GCGGTCTCCCCGAGAAGCGCAAGATCCGCGATGTGAAGAAGGTTATTGCT
GTGTCTTCGGCGAAGGGCGGTGTTGGGAAGTCGACGATAGCGGTCAACCT
CGCTCTCGCCTTCGCCCGCCGCGGCATTCGCACCGGCATCCTCGACACCG
ACATCTTCGGTCCATCCATTCCAACCCTGTTGAATCTATCCGGCGAGCCT
AGATTAGACGATAAAAACTGCCTCCTCCCCCTAACCAACTACGGCCTCAA
ATCCATGTCCATGGGCTACCTCCTCCCCAGCACCCAACCACCCCCGAACA
CCGATCCAACCGAGCGAGCCCCCATGGACCCGACCCCCATTTCCTGGCGT
GGCCTAATGGTCACCAAAGCGATGCACCAACTCCTCCACTCCGTATCCTG
GGGTCCACTCGACGTTCTCTTCCTCGACTTGCCCCCGGGCACCGGCGACG
TGCAACTCACCATCAACCAGGAAATTATCCTCGATGGGGCAGTGATCGTG
ACCACGCCGCAGGATATCGCGCTACGGGATGCGGTGCGCGGAATTGGCAT
GTTCCAGCGCATGGATGTGCCGGTGCTGGGGATGGTGAGGAATATGGCGT
TCTTTGCGTGCCCGGAGTGTGGGACGCAGACGAAGATCTTTTCGCAGGGG
AGGCATGTCCATGAGGGGGCGGATTGGGGGGTTGAGGCCGAGTGTAGGAG
GCTCGGTGTTGGGTTTTTGGGTGATGTGCCGCTGGATGCGAGGGTTTGTG
AGGATGCGGACCGCGGGGTGCCGAGTGTGGTTGCTGAGGAGGGGAAGGAG
GGCAAGGAGGGGGTTAGGAGGAAGGCGTTTTTGGATGTTGCGGAGCAGGT
TGCGAAGAAGGTGGGAATTGAGTGGTAAATGTTGGGGAAGAGATTGTTCT
CCACGTTTCGGAGCTTGCAGCATGAGAACCCACTGGGCCTCCCTCGCTCC
GGTACGCCGCCGTCTCTCCGAAGTCGTCGCGGTCTCCCCGAGAAGCGCAA
GATCCGCGATGTGAAGAAGGTTATTGCTGTGTCTTCGGCGAAGGGCGGTG
TTGGGAAGTCGACGATAGCGGTCAACCTCGCTCTCGCCTTCGCCCGCCGC
GGCATTCGCACCGGCATCCTCGACACCGACATCTTCGGTCCATCCATTCC
AACCCTGTTGAATCTATCCGGCGAGCCTAGATTAGACGATAAAAACTGCC
TCCTCCCCCTAACCAACTACGGCCTCAAATCCATGTCCATGGGCTACCTC
CTCCCCAGCACCCAACCACCCCCGAACACCGATCCAACCGAGCGAGCCCC
CATGGACCCGACCCCCATTTCCTGGCGTGGCCTAATGGTCACCAAAGCGA
TGCACCAACTCCTCCACTCCGTATCCTGGGGTCCACTCGACGTTCTCTTC
CTCGACTTGCCCCCGGGCACCGGCGACGTGCAACTCACCATCAACCAGGA
AATTATCCTCGATGGGGCAGTGATCGTGACCACGCCGCAGGATATCGCGC
TACGGGATGCGGTGCGCGGAATTGGCATGTTCCAGCGCATGGATGTGCCG
GTGCTGGGGATGGTGAGGAATATGGCGTTCTTTGCGTGCCCGGAGTGTGG
GACGCAGACGAAGATCTTTTCGCAGGGGAGGCATGTCCATGAGGGGGCGG
ATTGGGGGGTTGAGGCCGAGTGTAGGAGGCTCGGTGTTGGGTTTTTGGGT
GATGTGCCGCTGGATGCGAGGGTTTGTGAGGATGCGGACCGCGGGGTGCC
GAGTGTGGTTGCTGAGGAGGGGAAGGAGGGCAAGGAGGGGGTTAGGAGGA
AGGCGTTTTTGGATGTTGCGGAGCAGGTTGCGAAGAAGGTGGGAATTGAG
TGGTAAATGTTGGGGAAGAGATTGTTCTCCACGTTTCGGAGCTTGCAGCA
TGAGAACCCACTGGGCCTCCCTCGCTCCGGTACGCCGCCGTCTCTCCGAA
GTCGTCGCGGTCTCCCCGAGAAGCGCAAGATCCGCGATGTGAAGAAGGTT
ATTGCTGTGTCTTCGGCGAAGGGCGGTGTTGGGAAGTCGACGATAGCGGT
CAACCTCGCTCTCGCCTTCGCCCGCCGCGGCATTCGCACCGGCATCCTCG
ACACCGACATCTTCGGTCCATCCATTCCAACCCTGTTGAATCTATCCGGC
GAGCCTAGATTAGACGATAAAAACTGCCTCCTCCCCCTAACCAACTACGG
CCTCAAATCCATGTCCATGGGCTACCTCCTCCCCAGCACCCAACCACCCC
CGAACACCGATCCAACCGAGCGAGCCCCCATGGACCCGACCCCCATTTCC
TGGCGTGGCCTAATGGTCACCAAAGCGATGCACCAACTCCTCCACTCCGT
ATCCTGGGGTCCACTCGACGTTCTCTTCCTCGACTTGCCCCCGGGCACCG
GCGACGTGCAACTCACCATCAACCAGGAAATTATCCTCGATGGGGCAGTG
ATCGTGACCACGCCGCAGGATATCGCGCTACGGGATGCGGTGCGCGGAAT
TGGCATGTTCCAGCGCATGGATGTGCCGGTGCTGGGGATGGTGAGGAATA
TGGCGTTCTTTGCGTGCCCGGAGTGTGGGACGCAGACGAAGATCTTTTCG
CAGGGGAGGCATGTCCATGAGGGGGCGGATTGGGGGGTTGAGGCCGAGTG
TAGGAGGCTCGGTGTTGGGTTTTTGGGTGATGTGCCGCTGGATGCGAGGG
TTTGTGAGGATGCGGACCGCGGGGTGCCGAGTGTGGTTGCTGAGGAGGGG
AAGGAGGGCAAGGAGGGGGTTAGGAGGAAGGCGTTTTTGGATGTTGCGGA
GCAGGTTGCGAAGAAGGTGGGAATTGAGTGGTAAATGTTGGGGAAGAGAT
TGTTCTCCACGTTTCGGAGCTTGCAGCATGAGAACCCACTGGGCCTCCCT
CGCTCCGGTACGCCGCCGTCTCTCCGAAGTCGTCGCGGTCTCCCCGAGAA
GCGCAAGATCCGCGATGTGAAGAAGGTTATTGCTGTGTCTTCGGCGAAGG
GCGGTGTTGGGAAGTCGACGATAGCGGTCAACCTCGCTCTCGCCTTCGCC
CGCCGCGGCATTCGCACCGGCATCCTCGACACCGACATCTTCGGTCCATC
CATTCCAACCCTGTTGAATCTATCCGGCGAGCCTAGATTAGACGATAAAA
ACTGCCTCCTCCCCCTAACCAACTACGGCCTCAAATCCATGTCCATGGGC
TACCTCCTCCCCAGCACCCAACCACCCCCGAACACCGATCCAACCGAGCG
AGCCCCCATGGACCCGACCCCCATTTCCTGGCGTGGCCTAATGGTCACCA
AAGCGATGCACCAACTCCTCCACTCCGTATCCTGGGGTCCACTCGACGTT
CTCTTCCTCGACTTGCCCCCGGGCACCGGCGACGTGCAACTCACCATCAA
CCAGGAAATTATCCTCGATGGGGCAGTGATCGTGACCACGCCGCAGGATA
TCGCGCTACGGGATGCGGTGCGCGGAATTGGCATGTTCCAGCGCATGGAT
GTGCCGGTGCTGGGGATGGTGAGGAATATGGCGTTCTTTGCGTGCCCGGA
GTGTGGGACGCAGACGAAGATCTTTTCGCAGGGGAGGCATGTCCATGAGG
GGGCGGATTGGGGGGTTGAGGCCGAGTGTAGGAGGCTCGGTGTTGGGTTT
TTGGGTGATGTGCCGCTGGATGCGAGGGTTTGTGAGGATGCGGACCGCGG
GGTGCCGAGTGTGGTTGCTGAGGAGGGGAAGGAGGGCAAGGAGGGGGTTA
GGAGGAAGGCGTTTTTGGATGTTGCGGAGCAGGTTGCGAAGAAGGTGGGA
ATTGAGTGGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_92900ATCC64974_92900Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_92900-T1.exon1ATCC64974_92900-T1.exon1Aspergillus niger N402exon
ATCC64974_92900-T1.exon2ATCC64974_92900-T1.exon2Aspergillus niger N402exon
ATCC64974_92900-T1.exon3ATCC64974_92900-T1.exon3Aspergillus niger N402exon
ATCC64974_92900-T1.exon4ATCC64974_92900-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_92900-T1.cdsATCC64974_92900-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_92900-T1ATCC64974_92900-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR019591
DBxrefInterPro:IPR033756
DBxrefPFAM:PF10609
DBxrefPFAM:PF01656
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:1889146..1890305 +
Powered by Drupal