|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000016.1:1903003..1904377+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_92940-T1 ID=ATCC64974_92940-T1|Name=ATCC64974_92940-T1|organism=Aspergillus niger N402|type=mRNA|length=1375bp|location=Sequence derived from alignment at OGUI01000016.1:1903003..1904377+ (Aspergillus niger N402)
ATGCATTTCTTTGACTTACCTCAAGAGCTTCTGGAAGCTATCTTGGCACA
AGCCTCGCGTGGCTCTCTCGCCAGCCTCGCGCGGGTTTGCCAACGCCTTC
GACCGCTCGCCGAGCGCATCTTGTACCAGTCGGTGTACTTGCGAAATCAC
GACGGAGAAAAGTTCACCTACGCACTGGACTGTGTGCCAGCTCGCGCTGG
GTATGTTAGAGAGCTGATAGTTCACTACCATTATGTCGATGTTGAAGATG
AAGAGGAGTATTATCCCTTGTATGCAGAAACCCTCTCCCCGACGATCGGG
CGTCTCGTAAATCTGCGAACACTTGTCATCAAGGGGCTCGAGTTCGATGC
GGACCGCGAAGAGGACGATGAAATCATTGGGGGGTATGAAAGAGTCATCG
CAGAAGCCGAGAAATGGGACACACTTTTTGCGCAATCTGCTGTGCCGGGC
TCGCAGATCCTTCCTTCTCTTACAAAATGTCTGCCAATAACCTTCACTGC
TCTCTTACCTCATATGCTAATATTTCTCAGGTATGATGATCATGGACGAC
ATCGCGCCCAATCAACCAGCGTGGGACTTTAGTCTGAGGGGCGCCGTGCT
AATCCATCCGTGCCTTCAAGACCTGACCATCGTCGGGGGCGAAATTGAGA
GCCTGAAGAATCATGTGCCTTCACCACGATCAACGCCCCTCGAGAGGCTA
AGCCTGTTCGGCTGCGATGTGTCCCCCTCTGCGATGGGCGAGATGTTGTC
GCTGCCACGTGCCTTGAAACATTTGACGTATAAAGGGGCTCCATGGTGTT
ACAGGCCCACAAATCTTATGCCGAACCGGCAAATATACGTCGACAAGATA
AAGGCACAAGCGGATTCGCTTCTGAGTCTTGACATTGACTTCTATCCAGG
GGTTGTTGACAATCCCCCGGTAGACTTCACCGCCCTCCAGTGCCTGGAAC
AACTTACCGTCGAATCAGATGCATTGAGAGGAACTGGAGAATACGACCCG
AAGAACAACAGCAAACTATGCCTCTGGAAAAGCCCCGAGCTAAAATGTCA
GCTTCCTCCAAGCCTCAAGCATCTAGTGCTGTTCCTATACTGCCCGAAGA
ACCCGCCAGATTGGCGTACTCTAATTATACTTTACAACTGGATTTCGCGG
GGAAGTTTGCCGAACCTGGAAAAGGTCACGTTCCAGATAGCAAAACCGTG
TGGGCAAGAGATACTGGACCGTTCGATCGGAGGAAATGAAATGTCGATTG
GTCAGGCTTTTGGAGAGGTCAAAGTGCAATTGCAGTTCGAGCTGGTCCCT
AACAGCAACAACGACGGCTACGAGCTTTTCGACTGCCCTGAATGCGGCGT
AAATTGGCGAAACATGCATGCTTGA back to topCoding sequence (CDS) from alignment at OGUI01000016.1:1903003..1904377+ >ATCC64974_92940-T1 ID=ATCC64974_92940-T1|Name=ATCC64974_92940-T1|organism=Aspergillus niger N402|type=CDS|length=2646bp|location=Sequence derived from alignment at OGUI01000016.1:1903003..1904377+ (Aspergillus niger N402)
ATGCATTTCTTTGACTTACCTCAAGAGCTTCTGGAAGCTATCTTGGCACA
AGCCTCGCGTGGCTCTCTCGCCAGCCTCGCGCGGGTTTGCCAACGCCTTC
GACCGCTCGCCGAGCGCATCTTGTACCAGTCGGTGTACTTGCGAAATCAC
GACGGAGAAAAGTTCACCTACGCACTGGACTGTGTGCCAGCTCGCGCTGG
GTATGTTAGAGAGCTGATAGTTCACTACCATTATGTCGATGTTGAAGATG
AAGAGGAGTATTATCCCTTGTATGCAGAAACCCTCTCCCCGACGATCGGG
CGTCTCGTAAATCTGCGAACACTTGTCATCAAGGGGCTCGAGTTCGATGC
GGACCGCGAAGAGGACGATGAAATCATTGGGGGGTATGAAAGAGTCATCG
CAGAAGCCGAGAAATGGGACACACTTTTTGCGCAATCTGCTGTGCCGGGC
TCGCAGATCCTTCCTTCTCTTACAAAATGTATGATGATCATGGACGACAT
CGCGCCCAATCAACCAGCGTGGGACTTTAGTCTGAGGGGCGCCGTGCTAA
TCCATCCGTGCCTTCAAGACCTGACCATCGTCGGGGGCGAAATTGAGAGC
CTGAAGAATCATGTGCCTTCACCACGATCAACGCCCCTCGAGAGGCTAAG
CCTGTTCGGCTGCGATGTGTCCCCCTCTGCGATGGGCGAGATGTTGTCGC
TGCCACGTGCCTTGAAACATTTGACGTATAAAGGGGCTCCATGGTGTTAC
AGGCCCACAAATCTTATGCCGAACCGGCAAATATACGTCGACAAGATAAA
GGCACAAGCGGATTCGCTTCTGAGTCTTGACATTGACTTCTATCCAGGGG
TTGTTGACAATCCCCCGGTAGACTTCACCGCCCTCCAGTGCCTGGAACAA
CTTACCGTCGAATCAGATGCATTGAGAGGAACTGGAGAATACGACCCGAA
GAACAACAGCAAACTATGCCTCTGGAAAAGCCCCGAGCTAAAATGTCAGC
TTCCTCCAAGCCTCAAGCATCTAGTGCTGTTCCTATACTGCCCGAAGAAC
CCGCCAGATTGGCGTACTCTAATTATACTTTACAACTGGATTTCGCGGGG
AAGTTTGCCGAACCTGGAAAAGGTCACGTTCCAGATAGCAAAACCGTGTG
GGCAAGAGATACTGGACCGTTCGATCGGAGGAAATGAAATGTCGATTGGT
CAGGCTTTTGGAGAGGTCAAAGTGCAATTGCAGTTCGAGCTGGTCCCTAA
CAGCAACAACGACGGCTACGAGCTTTTCGACTGCCCTGAATGCGGCGTAA
ATTGGCGAAACATGCATGCTTGAATGCATTTCTTTGACTTACCTCAAGAG
CTTCTGGAAGCTATCTTGGCACAAGCCTCGCGTGGCTCTCTCGCCAGCCT
CGCGCGGGTTTGCCAACGCCTTCGACCGCTCGCCGAGCGCATCTTGTACC
AGTCGGTGTACTTGCGAAATCACGACGGAGAAAAGTTCACCTACGCACTG
GACTGTGTGCCAGCTCGCGCTGGGTATGTTAGAGAGCTGATAGTTCACTA
CCATTATGTCGATGTTGAAGATGAAGAGGAGTATTATCCCTTGTATGCAG
AAACCCTCTCCCCGACGATCGGGCGTCTCGTAAATCTGCGAACACTTGTC
ATCAAGGGGCTCGAGTTCGATGCGGACCGCGAAGAGGACGATGAAATCAT
TGGGGGGTATGAAAGAGTCATCGCAGAAGCCGAGAAATGGGACACACTTT
TTGCGCAATCTGCTGTGCCGGGCTCGCAGATCCTTCCTTCTCTTACAAAA
TGTATGATGATCATGGACGACATCGCGCCCAATCAACCAGCGTGGGACTT
TAGTCTGAGGGGCGCCGTGCTAATCCATCCGTGCCTTCAAGACCTGACCA
TCGTCGGGGGCGAAATTGAGAGCCTGAAGAATCATGTGCCTTCACCACGA
TCAACGCCCCTCGAGAGGCTAAGCCTGTTCGGCTGCGATGTGTCCCCCTC
TGCGATGGGCGAGATGTTGTCGCTGCCACGTGCCTTGAAACATTTGACGT
ATAAAGGGGCTCCATGGTGTTACAGGCCCACAAATCTTATGCCGAACCGG
CAAATATACGTCGACAAGATAAAGGCACAAGCGGATTCGCTTCTGAGTCT
TGACATTGACTTCTATCCAGGGGTTGTTGACAATCCCCCGGTAGACTTCA
CCGCCCTCCAGTGCCTGGAACAACTTACCGTCGAATCAGATGCATTGAGA
GGAACTGGAGAATACGACCCGAAGAACAACAGCAAACTATGCCTCTGGAA
AAGCCCCGAGCTAAAATGTCAGCTTCCTCCAAGCCTCAAGCATCTAGTGC
TGTTCCTATACTGCCCGAAGAACCCGCCAGATTGGCGTACTCTAATTATA
CTTTACAACTGGATTTCGCGGGGAAGTTTGCCGAACCTGGAAAAGGTCAC
GTTCCAGATAGCAAAACCGTGTGGGCAAGAGATACTGGACCGTTCGATCG
GAGGAAATGAAATGTCGATTGGTCAGGCTTTTGGAGAGGTCAAAGTGCAA
TTGCAGTTCGAGCTGGTCCCTAACAGCAACAACGACGGCTACGAGCTTTT
CGACTGCCCTGAATGCGGCGTAAATTGGCGAAACATGCATGCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_92940-T1 | ATCC64974_92940-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001810 |
| DBxref | PFAM:PF12937 |
| DBxref | PFAM:PF00646 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000016.1 | supercontig | OGUI01000016.1:1903003..1904377 + |
|
