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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000016.1:2019610..2020973- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_93320-T1 ID=ATCC64974_93320-T1|Name=ATCC64974_93320-T1|organism=Aspergillus niger N402|type=mRNA|length=1364bp|location=Sequence derived from alignment at OGUI01000016.1:2019610..2020973- (Aspergillus niger N402)
ATGGAATCGAAGGAGTCTGGACGTTCCAGTCCCCAGCAAAACCAGCATGA
TACTGTTGCTGCTGCACCAGCTCCGCCAAATGGAGGGGTCGCTGGCTGGT
CTGCTGTCTTTGCCTCCTTTCTACTCTTCGCCACTACCTATGGATACTCG
TCTGCGTTTGGGGCCTTCCAGGCGTATTATGAGTCTGACTTGTTGCGCTC
CAGTTCCCCATCACGCATCGCCTGGATAGGCACCATCCAAGGGTTCTTCA
TGATCTCCACGGGTGTTCTTGCCGGGCCACTGTTTGATCAGGGATATCTG
CACGCGCTAATGACTATCGGCTGTTTGCTGAACGTCATTGGGTTCATGAT
GCTGAGCTTATCTACAGAGTATTATCAAGTGTTCTTATCACAGGGTGTTT
GTAGCGGCATAGGCTGTGGCTTGATCTACGTACCCGCCCTGTCACTGGCT
TCCACCCTTTTCACCACACGCCGCAGCATTGCCGTCGGCCTATTGTCATC
TGGGGCCAGCATTGGTGCGTTGTCCTGATCGGCAAATACCCGCTGCCTAT
GCACTCTCACTCACCACACTTGTACCCAGGTGGAACCGTCTTTCCAATTC
TTTTTATCCGGCTGCAGCCACTGATCGGGTTTCCCTGGACAGCACGCACC
TTGGCCTTTATCCAGATAGCCTGCTCCTGTGTCGCCGTCCCGCTGCTGAT
AGCCACGACCAATCCAAAACCCAGTCCACCACGCCAGCTCATCCACTGGC
ATGCATTGAAGGAGTGGAGCTTCAATGCCTACGCATTTGTCAACTTTCTC
TTCTTTGTGTCCTACTTCGTCCCGCTATTCCTCCTACCTTCCTTTGCCCA
GTCCACACTGCACACTTCAGCAGACCTGAGCGTCTATATAGTTTCGATAT
TCAATGCGAGCTCCACTATCAGCCGTATTGGCTGCCCTCTGCTGGTTTCT
CGTTTCGGCCCGAGTAAGGTATTGTATACTAGCATGGCTGGTTCTGCAGT
CATCCTCTTCGGCTGGACAGGCGTTCACACAATCGCCGGATGCATTGTCT
TTTCTGTCTTCCTCGGGATCTTCACCGGCAGCTTTATCGCCGTTACTCCG
GTATTGATGGCTCATCCGGTCATTTCGCCTACCCCATCGGTCATTGGGAC
GCGTATGGGCATGCAGTGGTTTGCTGTTAGTTTGGGCGCGTTGATTGGTG
CGCCTATTGGTGGTGCTCTCGAGGGGTACGGCGGAAGCAATGGATTCTTG
GGTATGCAACTGTTTAGTGCAATCGTGATGGCTTTGGCAGCGACAGTACT
GCTAGTGCCCATGAGGGCGATTTGGCGGTATAATCACGCCCACTACGGCA
ATGGTGTTGTCTAG back to topCoding sequence (CDS) from alignment at OGUI01000016.1:2019610..2020973- >ATCC64974_93320-T1 ID=ATCC64974_93320-T1|Name=ATCC64974_93320-T1|organism=Aspergillus niger N402|type=CDS|length=2598bp|location=Sequence derived from alignment at OGUI01000016.1:2019610..2020973- (Aspergillus niger N402)
GTGGAACCGTCTTTCCAATTCTTTTTATCCGGCTGCAGCCACTGATCGGG
TTTCCCTGGACAGCACGCACCTTGGCCTTTATCCAGATAGCCTGCTCCTG
TGTCGCCGTCCCGCTGCTGATAGCCACGACCAATCCAAAACCCAGTCCAC
CACGCCAGCTCATCCACTGGCATGCATTGAAGGAGTGGAGCTTCAATGCC
TACGCATTTGTCAACTTTCTCTTCTTTGTGTCCTACTTCGTCCCGCTATT
CCTCCTACCTTCCTTTGCCCAGTCCACACTGCACACTTCAGCAGACCTGA
GCGTCTATATAGTTTCGATATTCAATGCGAGCTCCACTATCAGCCGTATT
GGCTGCCCTCTGCTGGTTTCTCGTTTCGGCCCGAGTAAGGTATTGTATAC
TAGCATGGCTGGTTCTGCAGTCATCCTCTTCGGCTGGACAGGCGTTCACA
CAATCGCCGGATGCATTGTCTTTTCTGTCTTCCTCGGGATCTTCACCGGC
AGCTTTATCGCCGTTACTCCGGTATTGATGGCTCATCCGGTCATTTCGCC
TACCCCATCGGTCATTGGGACGCGTATGGGCATGCAGTGGTTTGCTGTTA
GTTTGGGCGCGTTGATTGGTGCGCCTATTGGTGGTGCTCTCGAGGGGTAC
GGCGGAAGCAATGGATTCTTGGGTATGCAACTGTTTAGTGCAATCGTGAT
GGCTTTGGCAGCGACAGTACTGCTAGTGCCCATGAGGGCGATTTGGCGGT
ATAATCACGCCCACTACGGCAATGGTGTTGTCTAGATGGAATCGAAGGAG
TCTGGACGTTCCAGTCCCCAGCAAAACCAGCATGATACTGTTGCTGCTGC
ACCAGCTCCGCCAAATGGAGGGGTCGCTGGCTGGTCTGCTGTCTTTGCCT
CCTTTCTACTCTTCGCCACTACCTATGGATACTCGTCTGCGTTTGGGGCC
TTCCAGGCGTATTATGAGTCTGACTTGTTGCGCTCCAGTTCCCCATCACG
CATCGCCTGGATAGGCACCATCCAAGGGTTCTTCATGATCTCCACGGGTG
TTCTTGCCGGGCCACTGTTTGATCAGGGATATCTGCACGCGCTAATGACT
ATCGGCTGTTTGCTGAACGTCATTGGGTTCATGATGCTGAGCTTATCTAC
AGAGTATTATCAAGTGTTCTTATCACAGGGTGTTTGTAGCGGCATAGGCT
GTGGCTTGATCTACGTACCCGCCCTGTCACTGGCTTCCACCCTTTTCACC
ACACGCCGCAGCATTGCCGTCGGCCTATTGTCATCTGGGGCCAGCATTGG
TGGAACCGTCTTTCCAATTCTTTTTATCCGGCTGCAGCCACTGATCGGGT
TTCCCTGGACAGCACGCACCTTGGCCTTTATCCAGATAGCCTGCTCCTGT
GTCGCCGTCCCGCTGCTGATAGCCACGACCAATCCAAAACCCAGTCCACC
ACGCCAGCTCATCCACTGGCATGCATTGAAGGAGTGGAGCTTCAATGCCT
ACGCATTTGTCAACTTTCTCTTCTTTGTGTCCTACTTCGTCCCGCTATTC
CTCCTACCTTCCTTTGCCCAGTCCACACTGCACACTTCAGCAGACCTGAG
CGTCTATATAGTTTCGATATTCAATGCGAGCTCCACTATCAGCCGTATTG
GCTGCCCTCTGCTGGTTTCTCGTTTCGGCCCGAGTAAGGTATTGTATACT
AGCATGGCTGGTTCTGCAGTCATCCTCTTCGGCTGGACAGGCGTTCACAC
AATCGCCGGATGCATTGTCTTTTCTGTCTTCCTCGGGATCTTCACCGGCA
GCTTTATCGCCGTTACTCCGGTATTGATGGCTCATCCGGTCATTTCGCCT
ACCCCATCGGTCATTGGGACGCGTATGGGCATGCAGTGGTTTGCTGTTAG
TTTGGGCGCGTTGATTGGTGCGCCTATTGGTGGTGCTCTCGAGGGGTACG
GCGGAAGCAATGGATTCTTGGGTATGCAACTGTTTAGTGCAATCGTGATG
GCTTTGGCAGCGACAGTACTGCTAGTGCCCATGAGGGCGATTTGGCGGTA
TAATCACGCCCACTACGGCAATGGTGTTGTCTAGATGGAATCGAAGGAGT
CTGGACGTTCCAGTCCCCAGCAAAACCAGCATGATACTGTTGCTGCTGCA
CCAGCTCCGCCAAATGGAGGGGTCGCTGGCTGGTCTGCTGTCTTTGCCTC
CTTTCTACTCTTCGCCACTACCTATGGATACTCGTCTGCGTTTGGGGCCT
TCCAGGCGTATTATGAGTCTGACTTGTTGCGCTCCAGTTCCCCATCACGC
ATCGCCTGGATAGGCACCATCCAAGGGTTCTTCATGATCTCCACGGGTGT
TCTTGCCGGGCCACTGTTTGATCAGGGATATCTGCACGCGCTAATGACTA
TCGGCTGTTTGCTGAACGTCATTGGGTTCATGATGCTGAGCTTATCTACA
GAGTATTATCAAGTGTTCTTATCACAGGGTGTTTGTAGCGGCATAGGCTG
TGGCTTGATCTACGTACCCGCCCTGTCACTGGCTTCCACCCTTTTCACCA
CACGCCGCAGCATTGCCGTCGGCCTATTGTCATCTGGGGCCAGCATTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005887 | integral component of plasma membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_93320-T1 | ATCC64974_93320-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000016.1 | supercontig | OGUI01000016.1:2019610..2020973 - |
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