You are here

Home

ATCC64974_93350-T1, ATCC64974_93350-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_93350-T1
Unique NameATCC64974_93350-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:2027879..2028794-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_93350-T1 ID=ATCC64974_93350-T1|Name=ATCC64974_93350-T1|organism=Aspergillus niger N402|type=mRNA|length=916bp|location=Sequence derived from alignment at OGUI01000016.1:2027879..2028794- (Aspergillus niger N402)
ATGTACCATCTAGCTGGGAAAGCGGATACACCATTACAAAGAGCATTCAG
TACAATGCAATATGACTATCCAAACATAGAAAGCCAGTTCTTTGCCCTCC
CAAATTCTACCGCATTCGATTATGCCACGGAGGGAGTCTCACATACGCGA
AGCTTGACCTTCCTAAAAAAGCACATGAATGGCCCATTCTTCGACCTAGA
GGTTATCTGGGAAGAACATACTTATTTTGAATTCGACAATCGATCAGTTG
AGCAAACAATGGCAACAATGGTGCAAGAGCGCTATGTGAATCATATCCCA
ACGGTTAGTAGCATGTAACCCAGTCATTAGTGTCTCAATTCAACCGACTA
ACGCATTGTCTGAAGATGACGGGCGGGATTGGCCGTGATGAGCTCACCAG
ATTCTATCGCGACCATTTCATTTTCAACAACCCCCCAGATACCAAGAATG
AATTGATAAGTCGGACTATCGGTATTGATCGGGTAGTTGATAAGTTTATA
ATGACTTTCACACATGATTCTGAAGTCGATTGGTTGTAAGTGATACCTTC
CCATGTCCTGCATTATACATTCATAGTTATTTATACCGCTGTACTGATGG
ACCTTCCAGAATCCCTGGGATCCCTCCAACCGGCCGCAAGCTGGAGATCC
CGTTCATGGCAGTGGTCAATATCCGAGGAGATCGCCTTTACCACGAACAC
ATCACCTGGTACCAAGCCACTGTCCTCAAGCAGCTGGGCCTTATGCCAGA
GTTTCTACCATTTCCATATCCACTTACTGGTGGGAAGAGGCCGGCCCACG
GAAGAAGCTTTGAAGTTCGAGCACCGGTTGCAGGGGCTGAGACAGCAGCA
AAAATGCGTCATAAGAGCTCTGTTCCGTCGAACCAGTTGTTCGAGGGGGG
CATTCGGGAAGTTTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:2027879..2028794-

>ATCC64974_93350-T1 ID=ATCC64974_93350-T1|Name=ATCC64974_93350-T1|organism=Aspergillus niger N402|type=CDS|length=2340bp|location=Sequence derived from alignment at OGUI01000016.1:2027879..2028794- (Aspergillus niger N402)
AATCCCTGGGATCCCTCCAACCGGCCGCAAGCTGGAGATCCCGTTCATGG
CAGTGGTCAATATCCGAGGAGATCGCCTTTACCACGAACACATCACCTGG
TACCAAGCCACTGTCCTCAAGCAGCTGGGCCTTATGCCAGAGTTTCTACC
ATTTCCATATCCACTTACTGGTGGGAAGAGGCCGGCCCACGGAAGAAGCT
TTGAAGTTCGAGCACCGGTTGCAGGGGCTGAGACAGCAGCAAAAATGCGT
CATAAGAGCTCTGTTCCGTCGAACCAGTTGTTCGAGGGGGGCATTCGGGA
AGTTTGAATGACGGGCGGGATTGGCCGTGATGAGCTCACCAGATTCTATC
GCGACCATTTCATTTTCAACAACCCCCCAGATACCAAGAATGAATTGATA
AGTCGGACTATCGGTATTGATCGGGTAGTTGATAAGTTTATAATGACTTT
CACACATGATTCTGAAGTCGATTGGTTATGTACCATCTAGCTGGGAAAGC
GGATACACCATTACAAAGAGCATTCAGTACAATGCAATATGACTATCCAA
ACATAGAAAGCCAGTTCTTTGCCCTCCCAAATTCTACCGCATTCGATTAT
GCCACGGAGGGAGTCTCACATACGCGAAGCTTGACCTTCCTAAAAAAGCA
CATGAATGGCCCATTCTTCGACCTAGAGGTTATCTGGGAAGAACATACTT
ATTTTGAATTCGACAATCGATCAGTTGAGCAAACAATGGCAACAATGGTG
CAAGAGCGCTATGTGAATCATATCCCAACGAATCCCTGGGATCCCTCCAA
CCGGCCGCAAGCTGGAGATCCCGTTCATGGCAGTGGTCAATATCCGAGGA
GATCGCCTTTACCACGAACACATCACCTGGTACCAAGCCACTGTCCTCAA
GCAGCTGGGCCTTATGCCAGAGTTTCTACCATTTCCATATCCACTTACTG
GTGGGAAGAGGCCGGCCCACGGAAGAAGCTTTGAAGTTCGAGCACCGGTT
GCAGGGGCTGAGACAGCAGCAAAAATGCGTCATAAGAGCTCTGTTCCGTC
GAACCAGTTGTTCGAGGGGGGCATTCGGGAAGTTTGAATGACGGGCGGGA
TTGGCCGTGATGAGCTCACCAGATTCTATCGCGACCATTTCATTTTCAAC
AACCCCCCAGATACCAAGAATGAATTGATAAGTCGGACTATCGGTATTGA
TCGGGTAGTTGATAAGTTTATAATGACTTTCACACATGATTCTGAAGTCG
ATTGGTTATGTACCATCTAGCTGGGAAAGCGGATACACCATTACAAAGAG
CATTCAGTACAATGCAATATGACTATCCAAACATAGAAAGCCAGTTCTTT
GCCCTCCCAAATTCTACCGCATTCGATTATGCCACGGAGGGAGTCTCACA
TACGCGAAGCTTGACCTTCCTAAAAAAGCACATGAATGGCCCATTCTTCG
ACCTAGAGGTTATCTGGGAAGAACATACTTATTTTGAATTCGACAATCGA
TCAGTTGAGCAAACAATGGCAACAATGGTGCAAGAGCGCTATGTGAATCA
TATCCCAACGAATCCCTGGGATCCCTCCAACCGGCCGCAAGCTGGAGATC
CCGTTCATGGCAGTGGTCAATATCCGAGGAGATCGCCTTTACCACGAACA
CATCACCTGGTACCAAGCCACTGTCCTCAAGCAGCTGGGCCTTATGCCAG
AGTTTCTACCATTTCCATATCCACTTACTGGTGGGAAGAGGCCGGCCCAC
GGAAGAAGCTTTGAAGTTCGAGCACCGGTTGCAGGGGCTGAGACAGCAGC
AAAAATGCGTCATAAGAGCTCTGTTCCGTCGAACCAGTTGTTCGAGGGGG
GCATTCGGGAAGTTTGAATGACGGGCGGGATTGGCCGTGATGAGCTCACC
AGATTCTATCGCGACCATTTCATTTTCAACAACCCCCCAGATACCAAGAA
TGAATTGATAAGTCGGACTATCGGTATTGATCGGGTAGTTGATAAGTTTA
TAATGACTTTCACACATGATTCTGAAGTCGATTGGTTATGTACCATCTAG
CTGGGAAAGCGGATACACCATTACAAAGAGCATTCAGTACAATGCAATAT
GACTATCCAAACATAGAAAGCCAGTTCTTTGCCCTCCCAAATTCTACCGC
ATTCGATTATGCCACGGAGGGAGTCTCACATACGCGAAGCTTGACCTTCC
TAAAAAAGCACATGAATGGCCCATTCTTCGACCTAGAGGTTATCTGGGAA
GAACATACTTATTTTGAATTCGACAATCGATCAGTTGAGCAAACAATGGC
AACAATGGTGCAAGAGCGCTATGTGAATCATATCCCAACG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_93350ATCC64974_93350Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_93350-T1ATCC64974_93350-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_93350-T1.cdsATCC64974_93350-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_93350-T1.exon3ATCC64974_93350-T1.exon3Aspergillus niger N402exon
ATCC64974_93350-T1.exon2ATCC64974_93350-T1.exon2Aspergillus niger N402exon
ATCC64974_93350-T1.exon1ATCC64974_93350-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR032710
DBxrefInterPro:IPR037401
DBxrefPFAM:PF12680
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:2027879..2028794 -
Powered by Drupal