You are here

Home

ATCC64974_93520-T1, ATCC64974_93520-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_93520-T1
Unique NameATCC64974_93520-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:2081798..2084757+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_93520-T1 ID=ATCC64974_93520-T1|Name=ATCC64974_93520-T1|organism=Aspergillus niger N402|type=mRNA|length=2960bp|location=Sequence derived from alignment at OGUI01000016.1:2081798..2084757+ (Aspergillus niger N402)
ATGCGATCCAGTATCGCCTGCGCTCGTTGCCGTCGAAGCAAGATAAAATG
CGTCAACGCCGGCATCGATACCACCTGCCGTGCCTGTGAATCCTCCGGTC
GAGAATGTGTATATCCTGCCCCTGCCATCGGGGTGGGCGGTGGTGCCGCC
AAGCGAGACCTGGCCGCGCTGGCGGAGGGCGAGGAACGGAACAATGATTG
GGATAGCCCCAAGCGACAACGCTCACGGAAGGCCGTCGGCATCTCCTCGT
CCGCCGCAAAGGATGGGGGTAGATCCGCGCTCGACGTGCTCGATTCCTCA
GTCTTGACCACCAAGGTCTGGGACGCCGTCTTCGATCTCTTCCAGTCGCA
CTTTGCGACCATGCTTCCCTTCCTGCATCCCGCCTCGTTCATCGGTCAAA
CGCGCCAACTCTCCACCCCCTCGACCAATCCGCCCACAAATTCAGAACCC
TCGCGCGATCCCGCGCAAAGTCCGCCTGCAAGCAAGCCGGATCCCAATCC
GCTCATTCCCCTCGGTGTCCTCGCTCTCACCGCCCGTTTCCATCCCCAAC
TGGTCGCTTTCCACTCTCCACCGTCCCCTGGAAACCCGTCCAATCCGCTT
GTCGCTTCGGAATTCTATGCGACGGCGTTGCGTAGCCGGCTGGCCGGCGT
CGACGGCGCTAGTCTCGCAGTCACGGACCTCACCCGCGTCCAAGCATTGC
TCATGCTGGCGCTGCATGAATGGGGCATGTGCCGTGGCAAGAGCGCATGG
TTATATGTCGGAATGGCCATCCGGCTATCCCAAGCCATGGGCCTTCCCTT
CGAGCTCGAAAATGAGATGGCGTCCCGCGAGGGCCCCCGGTCCCCCGTAC
TGAAGATGGAGACCGAGATCTTTGGTCTGCCCCGTCGGCCGGTGGAGCCC
AGGGAACAGACTTCGGATGATATCATAGCGCTAGAGACGAAGCGTCGTAC
CTTCTGGGCGTGCTTCATTTTGGACCGTTGCTTAAGCAGCGGCAAATATC
GACCTCGTATGATCCGCGTCAAGGAGCTGGGTATCCAGCTTCCCAGCGAT
AACGCCTTTGCATTTGGAGAACGGGTCCGCACCTCCCGTCTCAGTGAGCC
GGCTGCACGCCGCCCACAATCGTTCGGGTCCCAGGGCGTCCAGATTCCCA
GCATCCGGCAGAGTCTTGGTGCTCTCGGTGACGACCGTTTACCGAGTAAT
GGCGCTCCCGATCCCAAGTCTTCCTGGTCACCTGTCTCGCGCCGTAAGGA
TTCGAGTGAGGATGAAATTGATCGATGGGAGGTTGGTGCCGAGGAATCTG
TGCTCAGTCGGGTAATTCGTATCATTCGCATCTGGGGAAGCATTGCCAAG
TGGTCGTGTGCTGGGGGGCGAAGGTAAGCTGCCGCTCTTCACTGATGGTT
CGCGTCGAGGGTCTAACACACAACTACAGGAACGAACAGTTGCCCCCATG
GCACCCAGACTCGCGTTTCTCCCAGCTTCGAGCGATGCTGGGCGAGTTCC
AGGATAGCCTTTCACGCAACTTGCAGTACTCTCCACGGAACACGGATACG
CACATCATGTATAAGAATACCCTCTCCCCGTATACGGTCATGCACGTGGT
CTATTTCCTGTCGGTCATCGTCCTTCATCGTGCATATATCCCGTTTCTTC
CGGTACGATGCTCGGAGCCGGTTGGACCCTTGGACGAACCCCTATTCCCC
GTGGAAAAGCCCGGTGTGGCAGAGGCTTTCTGGCGTGAGAGCGCTCGAGA
GCTCTTCAATGCCGCCCGACAGATGATTGATCTGGCGGTAACCTGCCAGG
ACCGCGGCGTCCTGGTTGAAAACCCTCTCGTCGGATTTGCTGTCTATAAC
GCCGCCTTTATCGGCGTGTATGCGGCCCATTTCCCTCATATGGATCCGGA
AGGCGCTTTGGCTCCGAGAGATCGTACCACTCAAGGCCAGGCACAAGCCC
GCAAGGCCCTTGACATCCTGCGCGACATGCGGCTGCGTCTGAAGATGGCA
CGGGGATGGTTCCGCACCCTCAACCGGCTGCATAGTTATTTCGCCAAGGT
CAAGCGCGATTTCCGGCGATCTTCTCGGAAGATGGACATGGATGGCGTCG
ATGTGCATATGAACGGGGTTCGTCCGGTGCGTGAAGGCGGAGCTGGAGGG
GGTCTTGAGGAATTCAAGCTATTGGAGAAGTTGTTCTTGGAGTTCGGTAT
CATCGAAGACCAACTGCCTGATAACAGTGCGGAGGATGATGGCCTGGCAG
CAGTCAGCGATCGGGCGACCAACCTGAGCGATGCAGGCAGCAATGCTGTT
CGCAGCGAAACTGGAGACACAGGCGAGCCTCCACTGGACGGTGCTGGCGG
ACGACGTGAGTCTTGGGTTCCCATCAACAGCCCTGGTATGCCGCTTCCTG
GACCGGATGGAGAGCGACGGCCTAGTCTGCCTCTGCCCCCAGGCCGCTCC
CTGCAGTCCCAGTCTCCGTACTCTCTACCCTCTCTCCAGCACCATCCTGA
CGCTGGGCTATACAACTCCTCCTCCCCCAATCTGCCATCGCTGGGACCCC
CAGGCCCATACGGGGCCCCGCCAACAACGACGGCAACAGCGTCCTCACAG
TATGGGGCGCCGCCGCCCAACAACCGTTTGCAGCCCCTCAATTCGTGGCT
GAACAATCGTCAGCAGCCTCCCCCGCCATATTCGCAGTCACTGCCGCCCA
TCAATGCGGCTACTTCACACAGCTTGCCGTTGCTGCCCCCACCTGGCTCA
GTCGGCCACCCGGGAGCGTCACCACCGGTAACAGTTGATGGTCTTGACAC
GGTCAACACCAACGGGCTGTGGTCGACCAGCCTGGGCGGAGATGATGTGC
TGGCGTTCTTGGAGGGATGTGAATACGACCAGCTGCCGGCGATGACGCCG
TCGGAGGTCGGTGTTCCGGTCGGGTGGCTCAGCACGGTGTGGACCGAGTT
CGCCCGCTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:2081798..2084757+

>ATCC64974_93520-T1 ID=ATCC64974_93520-T1|Name=ATCC64974_93520-T1|organism=Aspergillus niger N402|type=CDS|length=5808bp|location=Sequence derived from alignment at OGUI01000016.1:2081798..2084757+ (Aspergillus niger N402)
ATGCGATCCAGTATCGCCTGCGCTCGTTGCCGTCGAAGCAAGATAAAATG
CGTCAACGCCGGCATCGATACCACCTGCCGTGCCTGTGAATCCTCCGGTC
GAGAATGTGTATATCCTGCCCCTGCCATCGGGGTGGGCGGTGGTGCCGCC
AAGCGAGACCTGGCCGCGCTGGCGGAGGGCGAGGAACGGAACAATGATTG
GGATAGCCCCAAGCGACAACGCTCACGGAAGGCCGTCGGCATCTCCTCGT
CCGCCGCAAAGGATGGGGGTAGATCCGCGCTCGACGTGCTCGATTCCTCA
GTCTTGACCACCAAGGTCTGGGACGCCGTCTTCGATCTCTTCCAGTCGCA
CTTTGCGACCATGCTTCCCTTCCTGCATCCCGCCTCGTTCATCGGTCAAA
CGCGCCAACTCTCCACCCCCTCGACCAATCCGCCCACAAATTCAGAACCC
TCGCGCGATCCCGCGCAAAGTCCGCCTGCAAGCAAGCCGGATCCCAATCC
GCTCATTCCCCTCGGTGTCCTCGCTCTCACCGCCCGTTTCCATCCCCAAC
TGGTCGCTTTCCACTCTCCACCGTCCCCTGGAAACCCGTCCAATCCGCTT
GTCGCTTCGGAATTCTATGCGACGGCGTTGCGTAGCCGGCTGGCCGGCGT
CGACGGCGCTAGTCTCGCAGTCACGGACCTCACCCGCGTCCAAGCATTGC
TCATGCTGGCGCTGCATGAATGGGGCATGTGCCGTGGCAAGAGCGCATGG
TTATATGTCGGAATGGCCATCCGGCTATCCCAAGCCATGGGCCTTCCCTT
CGAGCTCGAAAATGAGATGGCGTCCCGCGAGGGCCCCCGGTCCCCCGTAC
TGAAGATGGAGACCGAGATCTTTGGTCTGCCCCGTCGGCCGGTGGAGCCC
AGGGAACAGACTTCGGATGATATCATAGCGCTAGAGACGAAGCGTCGTAC
CTTCTGGGCGTGCTTCATTTTGGACCGTTGCTTAAGCAGCGGCAAATATC
GACCTCGTATGATCCGCGTCAAGGAGCTGGGTATCCAGCTTCCCAGCGAT
AACGCCTTTGCATTTGGAGAACGGGTCCGCACCTCCCGTCTCAGTGAGCC
GGCTGCACGCCGCCCACAATCGTTCGGGTCCCAGGGCGTCCAGATTCCCA
GCATCCGGCAGAGTCTTGGTGCTCTCGGTGACGACCGTTTACCGAGTAAT
GGCGCTCCCGATCCCAAGTCTTCCTGGTCACCTGTCTCGCGCCGTAAGGA
TTCGAGTGAGGATGAAATTGATCGATGGGAGGTTGGTGCCGAGGAATCTG
TGCTCAGTCGGGTAATTCGTATCATTCGCATCTGGGGAAGCATTGCCAAG
TGGTCGTGTGCTGGGGGGCGAAGGAACGAACAGTTGCCCCCATGGCACCC
AGACTCGCGTTTCTCCCAGCTTCGAGCGATGCTGGGCGAGTTCCAGGATA
GCCTTTCACGCAACTTGCAGTACTCTCCACGGAACACGGATACGCACATC
ATGTATAAGAATACCCTCTCCCCGTATACGGTCATGCACGTGGTCTATTT
CCTGTCGGTCATCGTCCTTCATCGTGCATATATCCCGTTTCTTCCGGTAC
GATGCTCGGAGCCGGTTGGACCCTTGGACGAACCCCTATTCCCCGTGGAA
AAGCCCGGTGTGGCAGAGGCTTTCTGGCGTGAGAGCGCTCGAGAGCTCTT
CAATGCCGCCCGACAGATGATTGATCTGGCGGTAACCTGCCAGGACCGCG
GCGTCCTGGTTGAAAACCCTCTCGTCGGATTTGCTGTCTATAACGCCGCC
TTTATCGGCGTGTATGCGGCCCATTTCCCTCATATGGATCCGGAAGGCGC
TTTGGCTCCGAGAGATCGTACCACTCAAGGCCAGGCACAAGCCCGCAAGG
CCCTTGACATCCTGCGCGACATGCGGCTGCGTCTGAAGATGGCACGGGGA
TGGTTCCGCACCCTCAACCGGCTGCATAGTTATTTCGCCAAGGTCAAGCG
CGATTTCCGGCGATCTTCTCGGAAGATGGACATGGATGGCGTCGATGTGC
ATATGAACGGGGTTCGTCCGGTGCGTGAAGGCGGAGCTGGAGGGGGTCTT
GAGGAATTCAAGCTATTGGAGAAGTTGTTCTTGGAGTTCGGTATCATCGA
AGACCAACTGCCTGATAACAGTGCGGAGGATGATGGCCTGGCAGCAGTCA
GCGATCGGGCGACCAACCTGAGCGATGCAGGCAGCAATGCTGTTCGCAGC
GAAACTGGAGACACAGGCGAGCCTCCACTGGACGGTGCTGGCGGACGACG
TGAGTCTTGGGTTCCCATCAACAGCCCTGGTATGCCGCTTCCTGGACCGG
ATGGAGAGCGACGGCCTAGTCTGCCTCTGCCCCCAGGCCGCTCCCTGCAG
TCCCAGTCTCCGTACTCTCTACCCTCTCTCCAGCACCATCCTGACGCTGG
GCTATACAACTCCTCCTCCCCCAATCTGCCATCGCTGGGACCCCCAGGCC
CATACGGGGCCCCGCCAACAACGACGGCAACAGCGTCCTCACAGTATGGG
GCGCCGCCGCCCAACAACCGTTTGCAGCCCCTCAATTCGTGGCTGAACAA
TCGTCAGCAGCCTCCCCCGCCATATTCGCAGTCACTGCCGCCCATCAATG
CGGCTACTTCACACAGCTTGCCGTTGCTGCCCCCACCTGGCTCAGTCGGC
CACCCGGGAGCGTCACCACCGGTAACAGTTGATGGTCTTGACACGGTCAA
CACCAACGGGCTGTGGTCGACCAGCCTGGGCGGAGATGATGTGCTGGCGT
TCTTGGAGGGATGTGAATACGACCAGCTGCCGGCGATGACGCCGTCGGAG
GTCGGTGTTCCGGTCGGGTGGCTCAGCACGGTGTGGACCGAGTTCGCCCG
CTGAATGCGATCCAGTATCGCCTGCGCTCGTTGCCGTCGAAGCAAGATAA
AATGCGTCAACGCCGGCATCGATACCACCTGCCGTGCCTGTGAATCCTCC
GGTCGAGAATGTGTATATCCTGCCCCTGCCATCGGGGTGGGCGGTGGTGC
CGCCAAGCGAGACCTGGCCGCGCTGGCGGAGGGCGAGGAACGGAACAATG
ATTGGGATAGCCCCAAGCGACAACGCTCACGGAAGGCCGTCGGCATCTCC
TCGTCCGCCGCAAAGGATGGGGGTAGATCCGCGCTCGACGTGCTCGATTC
CTCAGTCTTGACCACCAAGGTCTGGGACGCCGTCTTCGATCTCTTCCAGT
CGCACTTTGCGACCATGCTTCCCTTCCTGCATCCCGCCTCGTTCATCGGT
CAAACGCGCCAACTCTCCACCCCCTCGACCAATCCGCCCACAAATTCAGA
ACCCTCGCGCGATCCCGCGCAAAGTCCGCCTGCAAGCAAGCCGGATCCCA
ATCCGCTCATTCCCCTCGGTGTCCTCGCTCTCACCGCCCGTTTCCATCCC
CAACTGGTCGCTTTCCACTCTCCACCGTCCCCTGGAAACCCGTCCAATCC
GCTTGTCGCTTCGGAATTCTATGCGACGGCGTTGCGTAGCCGGCTGGCCG
GCGTCGACGGCGCTAGTCTCGCAGTCACGGACCTCACCCGCGTCCAAGCA
TTGCTCATGCTGGCGCTGCATGAATGGGGCATGTGCCGTGGCAAGAGCGC
ATGGTTATATGTCGGAATGGCCATCCGGCTATCCCAAGCCATGGGCCTTC
CCTTCGAGCTCGAAAATGAGATGGCGTCCCGCGAGGGCCCCCGGTCCCCC
GTACTGAAGATGGAGACCGAGATCTTTGGTCTGCCCCGTCGGCCGGTGGA
GCCCAGGGAACAGACTTCGGATGATATCATAGCGCTAGAGACGAAGCGTC
GTACCTTCTGGGCGTGCTTCATTTTGGACCGTTGCTTAAGCAGCGGCAAA
TATCGACCTCGTATGATCCGCGTCAAGGAGCTGGGTATCCAGCTTCCCAG
CGATAACGCCTTTGCATTTGGAGAACGGGTCCGCACCTCCCGTCTCAGTG
AGCCGGCTGCACGCCGCCCACAATCGTTCGGGTCCCAGGGCGTCCAGATT
CCCAGCATCCGGCAGAGTCTTGGTGCTCTCGGTGACGACCGTTTACCGAG
TAATGGCGCTCCCGATCCCAAGTCTTCCTGGTCACCTGTCTCGCGCCGTA
AGGATTCGAGTGAGGATGAAATTGATCGATGGGAGGTTGGTGCCGAGGAA
TCTGTGCTCAGTCGGGTAATTCGTATCATTCGCATCTGGGGAAGCATTGC
CAAGTGGTCGTGTGCTGGGGGGCGAAGGAACGAACAGTTGCCCCCATGGC
ACCCAGACTCGCGTTTCTCCCAGCTTCGAGCGATGCTGGGCGAGTTCCAG
GATAGCCTTTCACGCAACTTGCAGTACTCTCCACGGAACACGGATACGCA
CATCATGTATAAGAATACCCTCTCCCCGTATACGGTCATGCACGTGGTCT
ATTTCCTGTCGGTCATCGTCCTTCATCGTGCATATATCCCGTTTCTTCCG
GTACGATGCTCGGAGCCGGTTGGACCCTTGGACGAACCCCTATTCCCCGT
GGAAAAGCCCGGTGTGGCAGAGGCTTTCTGGCGTGAGAGCGCTCGAGAGC
TCTTCAATGCCGCCCGACAGATGATTGATCTGGCGGTAACCTGCCAGGAC
CGCGGCGTCCTGGTTGAAAACCCTCTCGTCGGATTTGCTGTCTATAACGC
CGCCTTTATCGGCGTGTATGCGGCCCATTTCCCTCATATGGATCCGGAAG
GCGCTTTGGCTCCGAGAGATCGTACCACTCAAGGCCAGGCACAAGCCCGC
AAGGCCCTTGACATCCTGCGCGACATGCGGCTGCGTCTGAAGATGGCACG
GGGATGGTTCCGCACCCTCAACCGGCTGCATAGTTATTTCGCCAAGGTCA
AGCGCGATTTCCGGCGATCTTCTCGGAAGATGGACATGGATGGCGTCGAT
GTGCATATGAACGGGGTTCGTCCGGTGCGTGAAGGCGGAGCTGGAGGGGG
TCTTGAGGAATTCAAGCTATTGGAGAAGTTGTTCTTGGAGTTCGGTATCA
TCGAAGACCAACTGCCTGATAACAGTGCGGAGGATGATGGCCTGGCAGCA
GTCAGCGATCGGGCGACCAACCTGAGCGATGCAGGCAGCAATGCTGTTCG
CAGCGAAACTGGAGACACAGGCGAGCCTCCACTGGACGGTGCTGGCGGAC
GACGTGAGTCTTGGGTTCCCATCAACAGCCCTGGTATGCCGCTTCCTGGA
CCGGATGGAGAGCGACGGCCTAGTCTGCCTCTGCCCCCAGGCCGCTCCCT
GCAGTCCCAGTCTCCGTACTCTCTACCCTCTCTCCAGCACCATCCTGACG
CTGGGCTATACAACTCCTCCTCCCCCAATCTGCCATCGCTGGGACCCCCA
GGCCCATACGGGGCCCCGCCAACAACGACGGCAACAGCGTCCTCACAGTA
TGGGGCGCCGCCGCCCAACAACCGTTTGCAGCCCCTCAATTCGTGGCTGA
ACAATCGTCAGCAGCCTCCCCCGCCATATTCGCAGTCACTGCCGCCCATC
AATGCGGCTACTTCACACAGCTTGCCGTTGCTGCCCCCACCTGGCTCAGT
CGGCCACCCGGGAGCGTCACCACCGGTAACAGTTGATGGTCTTGACACGG
TCAACACCAACGGGCTGTGGTCGACCAGCCTGGGCGGAGATGATGTGCTG
GCGTTCTTGGAGGGATGTGAATACGACCAGCTGCCGGCGATGACGCCGTC
GGAGGTCGGTGTTCCGGTCGGGTGGCTCAGCACGGTGTGGACCGAGTTCG
CCCGCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_93520ATCC64974_93520Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_93520-T1.exon1ATCC64974_93520-T1.exon1Aspergillus niger N402exon
ATCC64974_93520-T1.exon2ATCC64974_93520-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_93520-T1.cdsATCC64974_93520-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_93520-T1ATCC64974_93520-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:2081798..2084757 +
Powered by Drupal