You are here

Home

ATCC64974_93880-T1, ATCC64974_93880-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_93880-T1
Unique NameATCC64974_93880-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:2195627..2197314+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_93880-T1 ID=ATCC64974_93880-T1|Name=ATCC64974_93880-T1|organism=Aspergillus niger N402|type=mRNA|length=1688bp|location=Sequence derived from alignment at OGUI01000016.1:2195627..2197314+ (Aspergillus niger N402)
ATGGCAACTTTGCGTCAGTATTTCAGCCTCCGAGACTCCGTGAGAGCGGA
CGTTGCCAAAGTCCACTCCTACTCCGGCAGCTCCTCGGGCACATCAACCC
CTGAAGAAAAGGCGTCTGCCCTTATACCCGGGATTCAAATCTCCCGTCCA
GACGAGCAAGATGGCTCTGTTACCTTTCTAGTCGGCTGGAGGGATTGCGA
TGCTCACAACCCTCAAAACTGGAGCCGCCCAAAGAAATGGTTTTGCACGG
TAGCAACCTGTCTCATCGCCCTGGCCATCACCATCCCCGGTACCATAGAC
GCCCCAGTCTCCGATGCCTTTAATGAACACTATGGCGTGGGCGCGATTGC
AGGGTCCATGACCACCGGTAAGTCGACCGTCTGGAATTTCAATGATCGTC
AATTGATCTTAATGCCCCTGGCAGGTATGTATCTTATCGGTGTGGGCTTT
GGCTCGCTGTTTGTCGGTCCTATCTCGGAAACATTTGGCCGCAATCTTGT
CTACTTCACCAATTTGGCCGTGTTTATGCTGTTCGTCATGGCAAAGGCAT
TGGCTCCTAATTATGGAGCTGCCATTGTTTTTCGCTTCCTAATCGGCTTC
TTTGGTGCCGCACCCATGACCGTTGCGGGTGGCACGGTGGGTGATCTTTG
GAGTCCTCTCGAGGCCACCTTTAGCCTACCATTTGTCACTTTGGCATCGT
ATTCCGGTCCTATTCTTGGTCCCATAATTGGTGCTTATATTCCCAAGTCA
GCCTTCAACTGGGTCGACTGGATCTCCCTGATCATCGCCGGGACAGTCCT
CATCTTTGTGGCTTTGTTCCAGCCAGAAACTTACGGCCCGTTGCTGCTGC
AATGGAAAGCCAAGCACCTACGAGACCAAACCGGAGACCCTCGATATCAG
GTTGATGAGTATGCGTCTGCCAGTTCTCTGGGTCGCCGCCTTCTCGTTAA
TGTCTACCGTCCGTTTCAGATGACCTACACTGAGCCGATCATCCTGGTTT
TCTCCTTCTACTTGGTCCTCTTATACATTGTATTATTCACCTTCCTGAAC
GGGTTCCCTTTCATATTCACCGATACATATGGGATCTCGACACCCCTGAC
TTATCTCATTTTCGTGGCCATGCTTGCCGGAGATGCCGTTGCACTGGTGC
TCATCCCGATCCTCTATCGCTGGACGAAACAGGCAGCGGCTAAGGCAGCG
GCTGAAGGAAGAGCCCTACAGGCAGAGGTATCACTCTACTGGGCAATGGT
TGGGGGTTCAATATTGATGCCAATCTCCTTGTTCTGGATGGGATGGACCT
GCTATGTAAGTTTTCCCTGACCCGTTCTGCGAAACCCAACATGACTGACA
GTATGACACAGCCCGGAGTCAGCATCTGGTCACCAATCCTCAGCACTTTC
GTTTTCGGCTACTCTCTCGTCACCATCTTCACGGCGACCTACCTTTACAT
CTGTTTCGTGTACACGATCTATGCTGGCTCAGCTCTCGCATTCGTTTCGT
TCAGCCGCTACGTTATCTCGGGCGCATTACTGCCAGCTTCCGTGCCAATG
TACCAACACATGACTCCCCACTGGGTTCTCACCCTGGTGGGTATCTTAAC
CACCATCATGGCCCCGGTGCCATTTTTGCTCTATCGCTATGGCCACCGCA
TTCGGGCCATGAGCAAGCACGTTCAGAACAAGGCTTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:2195627..2197314+

>ATCC64974_93880-T1 ID=ATCC64974_93880-T1|Name=ATCC64974_93880-T1|organism=Aspergillus niger N402|type=CDS|length=4725bp|location=Sequence derived from alignment at OGUI01000016.1:2195627..2197314+ (Aspergillus niger N402)
ATGGCAACTTTGCGTCAGTATTTCAGCCTCCGAGACTCCGTGAGAGCGGA
CGTTGCCAAAGTCCACTCCTACTCCGGCAGCTCCTCGGGCACATCAACCC
CTGAAGAAAAGGCGTCTGCCCTTATACCCGGGATTCAAATCTCCCGTCCA
GACGAGCAAGATGGCTCTGTTACCTTTCTAGTCGGCTGGAGGGATTGCGA
TGCTCACAACCCTCAAAACTGGAGCCGCCCAAAGAAATGGTTTTGCACGG
TAGCAACCTGTCTCATCGCCCTGGCCATCACCATCCCCGGTACCATAGAC
GCCCCAGTCTCCGATGCCTTTAATGAACACTATGGCGTGGGCGCGATTGC
AGGGTCCATGACCACCGGTATGTATCTTATCGGTGTGGGCTTTGGCTCGC
TGTTTGTCGGTCCTATCTCGGAAACATTTGGCCGCAATCTTGTCTACTTC
ACCAATTTGGCCGTGTTTATGCTGTTCGTCATGGCAAAGGCATTGGCTCC
TAATTATGGAGCTGCCATTGTTTTTCGCTTCCTAATCGGCTTCTTTGGTG
CCGCACCCATGACCGTTGCGGGTGGCACGGTGGGTGATCTTTGGAGTCCT
CTCGAGGCCACCTTTAGCCTACCATTTGTCACTTTGGCATCGTATTCCGG
TCCTATTCTTGGTCCCATAATTGGTGCTTATATTCCCAAGTCAGCCTTCA
ACTGGGTCGACTGGATCTCCCTGATCATCGCCGGGACAGTCCTCATCTTT
GTGGCTTTGTTCCAGCCAGAAACTTACGGCCCGTTGCTGCTGCAATGGAA
AGCCAAGCACCTACGAGACCAAACCGGAGACCCTCGATATCAGGTTGATG
AGTATGCGTCTGCCAGTTCTCTGGGTCGCCGCCTTCTCGTTAATGTCTAC
CGTCCGTTTCAGATGACCTACACTGAGCCGATCATCCTGGTTTTCTCCTT
CTACTTGGTCCTCTTATACATTGTATTATTCACCTTCCTGAACGGGTTCC
CTTTCATATTCACCGATACATATGGGATCTCGACACCCCTGACTTATCTC
ATTTTCGTGGCCATGCTTGCCGGAGATGCCGTTGCACTGGTGCTCATCCC
GATCCTCTATCGCTGGACGAAACAGGCAGCGGCTAAGGCAGCGGCTGAAG
GAAGAGCCCTACAGGCAGAGGTATCACTCTACTGGGCAATGGTTGGGGGT
TCAATATTGATGCCAATCTCCTTGTTCTGGATGGGATGGACCTGCTATCC
CGGAGTCAGCATCTGGTCACCAATCCTCAGCACTTTCGTTTTCGGCTACT
CTCTCGTCACCATCTTCACGGCGACCTACCTTTACATCTGTTTCGTGTAC
ACGATCTATGCTGGCTCAGCTCTCGCATTCGTTTCGTTCAGCCGCTACGT
TATCTCGGGCGCATTACTGCCAGCTTCCGTGCCAATGTACCAACACATGA
CTCCCCACTGGGTTCTCACCCTGGTGGGTATCTTAACCACCATCATGGCC
CCGGTGCCATTTTTGCTCTATCGCTATGGCCACCGCATTCGGGCCATGAG
CAAGCACGTTCAGAACAAGGCTTGAATGGCAACTTTGCGTCAGTATTTCA
GCCTCCGAGACTCCGTGAGAGCGGACGTTGCCAAAGTCCACTCCTACTCC
GGCAGCTCCTCGGGCACATCAACCCCTGAAGAAAAGGCGTCTGCCCTTAT
ACCCGGGATTCAAATCTCCCGTCCAGACGAGCAAGATGGCTCTGTTACCT
TTCTAGTCGGCTGGAGGGATTGCGATGCTCACAACCCTCAAAACTGGAGC
CGCCCAAAGAAATGGTTTTGCACGGTAGCAACCTGTCTCATCGCCCTGGC
CATCACCATCCCCGGTACCATAGACGCCCCAGTCTCCGATGCCTTTAATG
AACACTATGGCGTGGGCGCGATTGCAGGGTCCATGACCACCGGTATGTAT
CTTATCGGTGTGGGCTTTGGCTCGCTGTTTGTCGGTCCTATCTCGGAAAC
ATTTGGCCGCAATCTTGTCTACTTCACCAATTTGGCCGTGTTTATGCTGT
TCGTCATGGCAAAGGCATTGGCTCCTAATTATGGAGCTGCCATTGTTTTT
CGCTTCCTAATCGGCTTCTTTGGTGCCGCACCCATGACCGTTGCGGGTGG
CACGGTGGGTGATCTTTGGAGTCCTCTCGAGGCCACCTTTAGCCTACCAT
TTGTCACTTTGGCATCGTATTCCGGTCCTATTCTTGGTCCCATAATTGGT
GCTTATATTCCCAAGTCAGCCTTCAACTGGGTCGACTGGATCTCCCTGAT
CATCGCCGGGACAGTCCTCATCTTTGTGGCTTTGTTCCAGCCAGAAACTT
ACGGCCCGTTGCTGCTGCAATGGAAAGCCAAGCACCTACGAGACCAAACC
GGAGACCCTCGATATCAGGTTGATGAGTATGCGTCTGCCAGTTCTCTGGG
TCGCCGCCTTCTCGTTAATGTCTACCGTCCGTTTCAGATGACCTACACTG
AGCCGATCATCCTGGTTTTCTCCTTCTACTTGGTCCTCTTATACATTGTA
TTATTCACCTTCCTGAACGGGTTCCCTTTCATATTCACCGATACATATGG
GATCTCGACACCCCTGACTTATCTCATTTTCGTGGCCATGCTTGCCGGAG
ATGCCGTTGCACTGGTGCTCATCCCGATCCTCTATCGCTGGACGAAACAG
GCAGCGGCTAAGGCAGCGGCTGAAGGAAGAGCCCTACAGGCAGAGGTATC
ACTCTACTGGGCAATGGTTGGGGGTTCAATATTGATGCCAATCTCCTTGT
TCTGGATGGGATGGACCTGCTATCCCGGAGTCAGCATCTGGTCACCAATC
CTCAGCACTTTCGTTTTCGGCTACTCTCTCGTCACCATCTTCACGGCGAC
CTACCTTTACATCTGTTTCGTGTACACGATCTATGCTGGCTCAGCTCTCG
CATTCGTTTCGTTCAGCCGCTACGTTATCTCGGGCGCATTACTGCCAGCT
TCCGTGCCAATGTACCAACACATGACTCCCCACTGGGTTCTCACCCTGGT
GGGTATCTTAACCACCATCATGGCCCCGGTGCCATTTTTGCTCTATCGCT
ATGGCCACCGCATTCGGGCCATGAGCAAGCACGTTCAGAACAAGGCTTGA
ATGGCAACTTTGCGTCAGTATTTCAGCCTCCGAGACTCCGTGAGAGCGGA
CGTTGCCAAAGTCCACTCCTACTCCGGCAGCTCCTCGGGCACATCAACCC
CTGAAGAAAAGGCGTCTGCCCTTATACCCGGGATTCAAATCTCCCGTCCA
GACGAGCAAGATGGCTCTGTTACCTTTCTAGTCGGCTGGAGGGATTGCGA
TGCTCACAACCCTCAAAACTGGAGCCGCCCAAAGAAATGGTTTTGCACGG
TAGCAACCTGTCTCATCGCCCTGGCCATCACCATCCCCGGTACCATAGAC
GCCCCAGTCTCCGATGCCTTTAATGAACACTATGGCGTGGGCGCGATTGC
AGGGTCCATGACCACCGGTATGTATCTTATCGGTGTGGGCTTTGGCTCGC
TGTTTGTCGGTCCTATCTCGGAAACATTTGGCCGCAATCTTGTCTACTTC
ACCAATTTGGCCGTGTTTATGCTGTTCGTCATGGCAAAGGCATTGGCTCC
TAATTATGGAGCTGCCATTGTTTTTCGCTTCCTAATCGGCTTCTTTGGTG
CCGCACCCATGACCGTTGCGGGTGGCACGGTGGGTGATCTTTGGAGTCCT
CTCGAGGCCACCTTTAGCCTACCATTTGTCACTTTGGCATCGTATTCCGG
TCCTATTCTTGGTCCCATAATTGGTGCTTATATTCCCAAGTCAGCCTTCA
ACTGGGTCGACTGGATCTCCCTGATCATCGCCGGGACAGTCCTCATCTTT
GTGGCTTTGTTCCAGCCAGAAACTTACGGCCCGTTGCTGCTGCAATGGAA
AGCCAAGCACCTACGAGACCAAACCGGAGACCCTCGATATCAGGTTGATG
AGTATGCGTCTGCCAGTTCTCTGGGTCGCCGCCTTCTCGTTAATGTCTAC
CGTCCGTTTCAGATGACCTACACTGAGCCGATCATCCTGGTTTTCTCCTT
CTACTTGGTCCTCTTATACATTGTATTATTCACCTTCCTGAACGGGTTCC
CTTTCATATTCACCGATACATATGGGATCTCGACACCCCTGACTTATCTC
ATTTTCGTGGCCATGCTTGCCGGAGATGCCGTTGCACTGGTGCTCATCCC
GATCCTCTATCGCTGGACGAAACAGGCAGCGGCTAAGGCAGCGGCTGAAG
GAAGAGCCCTACAGGCAGAGGTATCACTCTACTGGGCAATGGTTGGGGGT
TCAATATTGATGCCAATCTCCTTGTTCTGGATGGGATGGACCTGCTATCC
CGGAGTCAGCATCTGGTCACCAATCCTCAGCACTTTCGTTTTCGGCTACT
CTCTCGTCACCATCTTCACGGCGACCTACCTTTACATCTGTTTCGTGTAC
ACGATCTATGCTGGCTCAGCTCTCGCATTCGTTTCGTTCAGCCGCTACGT
TATCTCGGGCGCATTACTGCCAGCTTCCGTGCCAATGTACCAACACATGA
CTCCCCACTGGGTTCTCACCCTGGTGGGTATCTTAACCACCATCATGGCC
CCGGTGCCATTTTTGCTCTATCGCTATGGCCACCGCATTCGGGCCATGAG
CAAGCACGTTCAGAACAAGGCTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005887integral component of plasma membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_93880ATCC64974_93880Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_93880-T1.exon1ATCC64974_93880-T1.exon1Aspergillus niger N402exon
ATCC64974_93880-T1.exon2ATCC64974_93880-T1.exon2Aspergillus niger N402exon
ATCC64974_93880-T1.exon3ATCC64974_93880-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_93880-T1.cdsATCC64974_93880-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_93880-T1ATCC64974_93880-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:2195627..2197314 +
Powered by Drupal