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ATCC64974_94710-T1, ATCC64974_94710-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_94710-T1
Unique NameATCC64974_94710-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:2458600..2459299+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_94710-T1 ID=ATCC64974_94710-T1|Name=ATCC64974_94710-T1|organism=Aspergillus niger N402|type=mRNA|length=700bp|location=Sequence derived from alignment at OGUI01000016.1:2458600..2459299+ (Aspergillus niger N402)
ATGGCCGACGCAGAGCTTGAAGAGGTCAGTATGAACCTTCCCACCTACGT
TCAACTTTCCCAGTCTTCCATGGACATTCATGCTTGTTGAATCTCCTTCG
GGTCCACACCTTCGACACTTCTCGTATCAAATGCTTAAATGTGGTATAGA
TCAGACGGGCCCGTCTTGCCCAGCTTCAGCAACAGGGTGGTGGCGCACGT
GGTGGCCCTTCGGACGGCAACCAGGAGGAACAGAGAAGGTATGCTTCCCA
GATGTTGTTTTTGCTTCTGCGCTTGTAAATCCTTACTGACTTGTCGCTCC
ACTTTAGGCAAGCTGAAGGTATGCGCAATCTCATAACCCATTAGAATAGG
ACATGCTGGAGGAATCTCTCTGCCTACATCGCTCTCTCTCAAACAATTTG
CTTATTCTTTCACAAATAGCCGACCGCCGCGCCACTATCCTGAACCAGAT
CCTCGAGCCCGAAGCCGCCGATCGTTTGGGTCGCATCCGCCTTGTTAAGG
AATCCCGCGCTGCTGACGTCGAATCCCGTCTCATCATGCTCGCCCAGTCC
GGTCAATTGCGCCAGAAGGTCACCGAGGACCAGCTCAAGCAGCTGCTGAA
CGCCATGGCCGAGAACCAGCGCAAGGATGAGGAGGAGCACAAAATTGTAA
TCAACCGACGCGGCGGCTGGGATGATGATGACGACCTGTTGGATCTGTGA
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Coding sequence (CDS) from alignment at OGUI01000016.1:2458600..2459299+

>ATCC64974_94710-T1 ID=ATCC64974_94710-T1|Name=ATCC64974_94710-T1|organism=Aspergillus niger N402|type=CDS|length=1620bp|location=Sequence derived from alignment at OGUI01000016.1:2458600..2459299+ (Aspergillus niger N402)
ATGGCCGACGCAGAGCTTGAAGAGATCAGACGGGCCCGTCTTGCCCAGCT
TCAGCAACAGGGTGGTGGCGCACGTGGTGGCCCTTCGGACGGCAACCAGG
AGGAACAGAGAAGGCAAGCTGAAGCCGACCGCCGCGCCACTATCCTGAAC
CAGATCCTCGAGCCCGAAGCCGCCGATCGTTTGGGTCGCATCCGCCTTGT
TAAGGAATCCCGCGCTGCTGACGTCGAATCCCGTCTCATCATGCTCGCCC
AGTCCGGTCAATTGCGCCAGAAGGTCACCGAGGACCAGCTCAAGCAGCTG
CTGAACGCCATGGCCGAGAACCAGCGCAAGGATGAGGAGGAGCACAAAAT
TGTAATCAACCGACGCGGCGGCTGGGATGATGATGACGACCTGTTGGATC
TGTGAATGGCCGACGCAGAGCTTGAAGAGATCAGACGGGCCCGTCTTGCC
CAGCTTCAGCAACAGGGTGGTGGCGCACGTGGTGGCCCTTCGGACGGCAA
CCAGGAGGAACAGAGAAGGCAAGCTGAAGCCGACCGCCGCGCCACTATCC
TGAACCAGATCCTCGAGCCCGAAGCCGCCGATCGTTTGGGTCGCATCCGC
CTTGTTAAGGAATCCCGCGCTGCTGACGTCGAATCCCGTCTCATCATGCT
CGCCCAGTCCGGTCAATTGCGCCAGAAGGTCACCGAGGACCAGCTCAAGC
AGCTGCTGAACGCCATGGCCGAGAACCAGCGCAAGGATGAGGAGGAGCAC
AAAATTGTAATCAACCGACGCGGCGGCTGGGATGATGATGACGACCTGTT
GGATCTGTGAATGGCCGACGCAGAGCTTGAAGAGATCAGACGGGCCCGTC
TTGCCCAGCTTCAGCAACAGGGTGGTGGCGCACGTGGTGGCCCTTCGGAC
GGCAACCAGGAGGAACAGAGAAGGCAAGCTGAAGCCGACCGCCGCGCCAC
TATCCTGAACCAGATCCTCGAGCCCGAAGCCGCCGATCGTTTGGGTCGCA
TCCGCCTTGTTAAGGAATCCCGCGCTGCTGACGTCGAATCCCGTCTCATC
ATGCTCGCCCAGTCCGGTCAATTGCGCCAGAAGGTCACCGAGGACCAGCT
CAAGCAGCTGCTGAACGCCATGGCCGAGAACCAGCGCAAGGATGAGGAGG
AGCACAAAATTGTAATCAACCGACGCGGCGGCTGGGATGATGATGACGAC
CTGTTGGATCTGTGAATGGCCGACGCAGAGCTTGAAGAGATCAGACGGGC
CCGTCTTGCCCAGCTTCAGCAACAGGGTGGTGGCGCACGTGGTGGCCCTT
CGGACGGCAACCAGGAGGAACAGAGAAGGCAAGCTGAAGCCGACCGCCGC
GCCACTATCCTGAACCAGATCCTCGAGCCCGAAGCCGCCGATCGTTTGGG
TCGCATCCGCCTTGTTAAGGAATCCCGCGCTGCTGACGTCGAATCCCGTC
TCATCATGCTCGCCCAGTCCGGTCAATTGCGCCAGAAGGTCACCGAGGAC
CAGCTCAAGCAGCTGCTGAACGCCATGGCCGAGAACCAGCGCAAGGATGA
GGAGGAGCACAAAATTGTAATCAACCGACGCGGCGGCTGGGATGATGATG
ACGACCTGTTGGATCTGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_94710ATCC64974_94710Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_94710-T1.exon1ATCC64974_94710-T1.exon1Aspergillus niger N402exon
ATCC64974_94710-T1.exon2ATCC64974_94710-T1.exon2Aspergillus niger N402exon
ATCC64974_94710-T1.exon3ATCC64974_94710-T1.exon3Aspergillus niger N402exon
ATCC64974_94710-T1.exon4ATCC64974_94710-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_94710-T1.cdsATCC64974_94710-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_94710-T1ATCC64974_94710-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265HEP
DBxrefInterPro:IPR002836
DBxrefInterPro:IPR036883
DBxrefPFAM:PF01984
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:2458600..2459299 +
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