You are here

Home

ATCC64974_94780-T1, ATCC64974_94780-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_94780-T1
Unique NameATCC64974_94780-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:2468799..2470041+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_94780-T1 ID=ATCC64974_94780-T1|Name=ATCC64974_94780-T1|organism=Aspergillus niger N402|type=mRNA|length=1243bp|location=Sequence derived from alignment at OGUI01000016.1:2468799..2470041+ (Aspergillus niger N402)
ATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAACCACTCC
CCTACGCCCCACATCCTCAATCCTGCGCACCGCTCTCAACAGAACAGGAA
CAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCCTCCGCCGCACCAAC
AACACCACCCAACTTCGCTTCTACAACAACAACCAATTTACCGACGACCA
GCGCTGGCTCTCCGTCGTCGATGCCCCCTCTCAAGTCGTCCGCACAGGCC
GGAAACATGGTCCGGGACTGATCATTCTCGGTGCGCTATAACCCCGTCCA
TTCCAACCTCATAACCATAGACTAACATACAATGATGAAATACAGCACTA
ATCCCCATAATCTCCTTCGCCCTCGGAACATGGCAAATTCAACGCCTAGA
GTGGAAAACGAACCTAATTGCCAAATTCGAAGACCGGCTAATCAAGCCCC
CGCTGCCTCTACCCCCGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGAT
TACCGCCGTGTCGTCGCGACGGGGACGCTGCGACATGATCAGGAGATGCT
GGTGGGTCCGCGCATGCGGGAGGGCCAGGATGGGTTCTTTGTGGTGACGC
CGCTGGAGCGCGAGGGTGGGAGTACGGTGTTGGTGAATCGGGGGTGGATT
AGTCGGAAGATGAAGGAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAG
GGCGCTGCCGGAGGGAGAGGTCGTGGTGGAGGGATTGTTGAGGGAACCGT
GGAAGAAGAATATGTTTACGCCGGATAATGTGCCGGCTGAGGGAAAGTTT
TATTTCCCTGATATTGAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGT
TTGGATTGAGGAGACTATGGGTATGTTATTCTTCCTGCTTCACTTTGTCC
TTTCGACTTGGTTTGGCTTCGGCTATGTATTGGGATGAAGAAGCTAATCT
AGGATGCTGGATCAGTCCCCGATATGGTTGAGGCGATGGATCGCGAGGCC
AAGGGTATTCCTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCA
CAGTCAGTATATCTTTACTTGGTAGGTTTCCCTTCCTCCGTTCCTCCCCG
GATGCTGCATGGCTGCCTGGGATCCTGGCTAACGGCTGCGCAGGTACGGC
TTGTCGTTGGCAACCTCCATCATGCTGTGGATGATCATCCGCAAGCGTCC
CAACGAGGCTACTCGGCGTGTGCGCCAGAACCGGAACTGGTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:2468799..2470041+

>ATCC64974_94780-T1 ID=ATCC64974_94780-T1|Name=ATCC64974_94780-T1|organism=Aspergillus niger N402|type=CDS|length=4044bp|location=Sequence derived from alignment at OGUI01000016.1:2468799..2470041+ (Aspergillus niger N402)
ATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGCTCAAGAACCACTCC
CCTACGCCCCACATCCTCAATCCTGCGCACCGCTCTCAACAGAACAGGAA
CAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCCTCCGCCGCACCAAC
AACACCACCCAACTTCGCTTCTACAACAACAACCAATTTACCGACGACCA
GCGCTGGCTCTCCGTCGTCGATGCCCCCTCTCAAGTCGTCCGCACAGGCC
GGAAACATGGTCCGGGACTGATCATTCTCGCACTAATCCCCATAATCTCC
TTCGCCCTCGGAACATGGCAAATTCAACGCCTAGAGTGGAAAACGAACCT
AATTGCCAAATTCGAAGACCGGCTAATCAAGCCCCCGCTGCCTCTACCCC
CGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACCGCCGTGTCGTC
GCGACGGGGACGCTGCGACATGATCAGGAGATGCTGGTGGGTCCGCGCAT
GCGGGAGGGCCAGGATGGGTTCTTTGTGGTGACGCCGCTGGAGCGCGAGG
GTGGGAGTACGGTGTTGGTGAATCGGGGGTGGATTAGTCGGAAGATGAAG
GAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAGGGCGCTGCCGGAGGG
AGAGGTCGTGGTGGAGGGATTGTTGAGGGAACCGTGGAAGAAGAATATGT
TTACGCCGGATAATGTGCCGGCTGAGGGAAAGTTTTATTTCCCTGATATT
GAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGTTTGGATTGAGGAGAC
TATGGTCCCCGATATGGTTGAGGCGATGGATCGCGAGGCCAAGGGTATTC
CTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACCACAGTCAGTAT
ATCTTTACTTGGTACGGCTTGTCGTTGGCAACCTCCATCATGCTGTGGAT
GATCATCCGCAAGCGTCCCAACGAGGCTACTCGGCGTGTGCGCCAGAACC
GGAACTGGTAGATGCGCTCCCTCCTCTCCGTCCTCTCCCGGACGGGCTCA
AGAACCACTCCCCTACGCCCCACATCCTCAATCCTGCGCACCGCTCTCAA
CAGAACAGGAACAGCAGCAGGACCGGACTCCCTCTGCACGCGCTGCCTCC
GCCGCACCAACAACACCACCCAACTTCGCTTCTACAACAACAACCAATTT
ACCGACGACCAGCGCTGGCTCTCCGTCGTCGATGCCCCCTCTCAAGTCGT
CCGCACAGGCCGGAAACATGGTCCGGGACTGATCATTCTCGCACTAATCC
CCATAATCTCCTTCGCCCTCGGAACATGGCAAATTCAACGCCTAGAGTGG
AAAACGAACCTAATTGCCAAATTCGAAGACCGGCTAATCAAGCCCCCGCT
GCCTCTACCCCCGCGGGTCGACCCGTCCGCGATCTCCGAGTTCGATTACC
GCCGTGTCGTCGCGACGGGGACGCTGCGACATGATCAGGAGATGCTGGTG
GGTCCGCGCATGCGGGAGGGCCAGGATGGGTTCTTTGTGGTGACGCCGCT
GGAGCGCGAGGGTGGGAGTACGGTGTTGGTGAATCGGGGGTGGATTAGTC
GGAAGATGAAGGAGAAGAGGGATAGATTGAGGCAGGGGGAAGGGAGGGCG
CTGCCGGAGGGAGAGGTCGTGGTGGAGGGATTGTTGAGGGAACCGTGGAA
GAAGAATATGTTTACGCCGGATAATGTGCCGGCTGAGGGAAAGTTTTATT
TCCCTGATATTGAGCAGATGGCGGAGTTGACGGGGAGTCAGCCCGTTTGG
ATTGAGGAGACTATGGTCCCCGATATGGTTGAGGCGATGGATCGCGAGGC
CAAGGGTATTCCTATTGGCCGTGCTGCTGAAGTCAACCTCAAGAACAACC
ACAGTCAGTATATCTTTACTTGGTACGGCTTGTCGTTGGCAACCTCCATC
ATGCTGTGGATGATCATCCGCAAGCGTCCCAACGAGGCTACTCGGCGTGT
GCGCCAGAACCGGAACTGGTAGATGCGCTCCCTCCTCTCCGTCCTCTCCC
GGACGGGCTCAAGAACCACTCCCCTACGCCCCACATCCTCAATCCTGCGC
ACCGCTCTCAACAGAACAGGAACAGCAGCAGGACCGGACTCCCTCTGCAC
GCGCTGCCTCCGCCGCACCAACAACACCACCCAACTTCGCTTCTACAACA
ACAACCAATTTACCGACGACCAGCGCTGGCTCTCCGTCGTCGATGCCCCC
TCTCAAGTCGTCCGCACAGGCCGGAAACATGGTCCGGGACTGATCATTCT
CGCACTAATCCCCATAATCTCCTTCGCCCTCGGAACATGGCAAATTCAAC
GCCTAGAGTGGAAAACGAACCTAATTGCCAAATTCGAAGACCGGCTAATC
AAGCCCCCGCTGCCTCTACCCCCGCGGGTCGACCCGTCCGCGATCTCCGA
GTTCGATTACCGCCGTGTCGTCGCGACGGGGACGCTGCGACATGATCAGG
AGATGCTGGTGGGTCCGCGCATGCGGGAGGGCCAGGATGGGTTCTTTGTG
GTGACGCCGCTGGAGCGCGAGGGTGGGAGTACGGTGTTGGTGAATCGGGG
GTGGATTAGTCGGAAGATGAAGGAGAAGAGGGATAGATTGAGGCAGGGGG
AAGGGAGGGCGCTGCCGGAGGGAGAGGTCGTGGTGGAGGGATTGTTGAGG
GAACCGTGGAAGAAGAATATGTTTACGCCGGATAATGTGCCGGCTGAGGG
AAAGTTTTATTTCCCTGATATTGAGCAGATGGCGGAGTTGACGGGGAGTC
AGCCCGTTTGGATTGAGGAGACTATGGTCCCCGATATGGTTGAGGCGATG
GATCGCGAGGCCAAGGGTATTCCTATTGGCCGTGCTGCTGAAGTCAACCT
CAAGAACAACCACAGTCAGTATATCTTTACTTGGTACGGCTTGTCGTTGG
CAACCTCCATCATGCTGTGGATGATCATCCGCAAGCGTCCCAACGAGGCT
ACTCGGCGTGTGCGCCAGAACCGGAACTGGTAGATGCGCTCCCTCCTCTC
CGTCCTCTCCCGGACGGGCTCAAGAACCACTCCCCTACGCCCCACATCCT
CAATCCTGCGCACCGCTCTCAACAGAACAGGAACAGCAGCAGGACCGGAC
TCCCTCTGCACGCGCTGCCTCCGCCGCACCAACAACACCACCCAACTTCG
CTTCTACAACAACAACCAATTTACCGACGACCAGCGCTGGCTCTCCGTCG
TCGATGCCCCCTCTCAAGTCGTCCGCACAGGCCGGAAACATGGTCCGGGA
CTGATCATTCTCGCACTAATCCCCATAATCTCCTTCGCCCTCGGAACATG
GCAAATTCAACGCCTAGAGTGGAAAACGAACCTAATTGCCAAATTCGAAG
ACCGGCTAATCAAGCCCCCGCTGCCTCTACCCCCGCGGGTCGACCCGTCC
GCGATCTCCGAGTTCGATTACCGCCGTGTCGTCGCGACGGGGACGCTGCG
ACATGATCAGGAGATGCTGGTGGGTCCGCGCATGCGGGAGGGCCAGGATG
GGTTCTTTGTGGTGACGCCGCTGGAGCGCGAGGGTGGGAGTACGGTGTTG
GTGAATCGGGGGTGGATTAGTCGGAAGATGAAGGAGAAGAGGGATAGATT
GAGGCAGGGGGAAGGGAGGGCGCTGCCGGAGGGAGAGGTCGTGGTGGAGG
GATTGTTGAGGGAACCGTGGAAGAAGAATATGTTTACGCCGGATAATGTG
CCGGCTGAGGGAAAGTTTTATTTCCCTGATATTGAGCAGATGGCGGAGTT
GACGGGGAGTCAGCCCGTTTGGATTGAGGAGACTATGGTCCCCGATATGG
TTGAGGCGATGGATCGCGAGGCCAAGGGTATTCCTATTGGCCGTGCTGCT
GAAGTCAACCTCAAGAACAACCACAGTCAGTATATCTTTACTTGGTACGG
CTTGTCGTTGGCAACCTCCATCATGCTGTGGATGATCATCCGCAAGCGTC
CCAACGAGGCTACTCGGCGTGTGCGCCAGAACCGGAACTGGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_94780ATCC64974_94780Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_94780-T1.exon1ATCC64974_94780-T1.exon1Aspergillus niger N402exon
ATCC64974_94780-T1.exon2ATCC64974_94780-T1.exon2Aspergillus niger N402exon
ATCC64974_94780-T1.exon3ATCC64974_94780-T1.exon3Aspergillus niger N402exon
ATCC64974_94780-T1.exon4ATCC64974_94780-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_94780-T1.cdsATCC64974_94780-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_94780-T1ATCC64974_94780-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263V60
DBxrefInterPro:IPR002994
DBxrefPFAM:PF02104
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:2468799..2470041 +
Powered by Drupal