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ATCC64974_94880-T1, ATCC64974_94880-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_94880-T1
Unique NameATCC64974_94880-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:2495089..2495843-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_94880-T1 ID=ATCC64974_94880-T1|Name=ATCC64974_94880-T1|organism=Aspergillus niger N402|type=mRNA|length=755bp|location=Sequence derived from alignment at OGUI01000016.1:2495089..2495843- (Aspergillus niger N402)
ATGTCCATCGAAAACCTCAAGACCTTCGGTGAGTCGCTTCGCCACCTCCC
CTCCCCCCCTTCTGTGGACATCGTCACCCGGCCCGCAGTACTGCCTGCAG
CAGATGTTGGTCTTCCTAGCGATGGTCTTCCAAAAGATCATTGCGAAGTT
GGCTCTTCTTGCTAAGGCTTGGCTGTGTAGCCAGGGTTGTCCCTTTTGAT
CCAACTGCGTCACAAGTTGGCGGGGTAATACTTGTTCATGAGAGCCTGAG
GCTGACACGTGCTCTTCCACAGACCCCTTCGCCGAAGCTGACGAAGACAC
CGGCGAGACTAAACAGTCTCAAAATTACATCCATATACGGATTCAACGTA
CGTTCTATTGTCGTCCCCTCCACGTGGTGCCTTGACCCCTGTCATCGTCA
CTGGTGGCGCCACGCTGTCTTGTCATGCACCCATGACTAACATGTATCTG
TCCACAGAGCGCAATGGTCGTAAGACCTTGACTACCGTCCAGGGTCTTCC
TAAGAAGTTCGATCAGAAGAAGATCTTGAAGGTCATCAAGAAGAAGTTCG
GTATGTTGTCGCCTACTACCTACGTGCCTCGCCATGTCACTAACTTCCCT
TGTCAGCCTGCAATGGCACCATTGTCAACGACACTGAGATGGGCGAGGTG
ATTCAGCTGCAGGGAGACCAGCGTAAAGATGTTCAGGAGTTCTTGACCGA
CAAGAAGGAGGGTCTCGAGCTGGACGCCAAGACCATCAAGGTCCACGGTT
TCTAA
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Coding sequence (CDS) from alignment at OGUI01000016.1:2495089..2495843-

>ATCC64974_94880-T1 ID=ATCC64974_94880-T1|Name=ATCC64974_94880-T1|organism=Aspergillus niger N402|type=CDS|length=1380bp|location=Sequence derived from alignment at OGUI01000016.1:2495089..2495843- (Aspergillus niger N402)
CCTGCAATGGCACCATTGTCAACGACACTGAGATGGGCGAGGTGATTCAG
CTGCAGGGAGACCAGCGTAAAGATGTTCAGGAGTTCTTGACCGACAAGAA
GGAGGGTCTCGAGCTGGACGCCAAGACCATCAAGGTCCACGGTTTCTAAA
GCGCAATGGTCGTAAGACCTTGACTACCGTCCAGGGTCTTCCTAAGAAGT
TCGATCAGAAGAAGATCTTGAAGGTCATCAAGAAGAAGTTCGACCCCTTC
GCCGAAGCTGACGAAGACACCGGCGAGACTAAACAGTCTCAAAATTACAT
CCATATACGGATTCAACATGTCCATCGAAAACCTCAAGACCTTCGCCTGC
AATGGCACCATTGTCAACGACACTGAGATGGGCGAGGTGATTCAGCTGCA
GGGAGACCAGCGTAAAGATGTTCAGGAGTTCTTGACCGACAAGAAGGAGG
GTCTCGAGCTGGACGCCAAGACCATCAAGGTCCACGGTTTCTAAAGCGCA
ATGGTCGTAAGACCTTGACTACCGTCCAGGGTCTTCCTAAGAAGTTCGAT
CAGAAGAAGATCTTGAAGGTCATCAAGAAGAAGTTCGACCCCTTCGCCGA
AGCTGACGAAGACACCGGCGAGACTAAACAGTCTCAAAATTACATCCATA
TACGGATTCAACATGTCCATCGAAAACCTCAAGACCTTCGCCTGCAATGG
CACCATTGTCAACGACACTGAGATGGGCGAGGTGATTCAGCTGCAGGGAG
ACCAGCGTAAAGATGTTCAGGAGTTCTTGACCGACAAGAAGGAGGGTCTC
GAGCTGGACGCCAAGACCATCAAGGTCCACGGTTTCTAAAGCGCAATGGT
CGTAAGACCTTGACTACCGTCCAGGGTCTTCCTAAGAAGTTCGATCAGAA
GAAGATCTTGAAGGTCATCAAGAAGAAGTTCGACCCCTTCGCCGAAGCTG
ACGAAGACACCGGCGAGACTAAACAGTCTCAAAATTACATCCATATACGG
ATTCAACATGTCCATCGAAAACCTCAAGACCTTCGCCTGCAATGGCACCA
TTGTCAACGACACTGAGATGGGCGAGGTGATTCAGCTGCAGGGAGACCAG
CGTAAAGATGTTCAGGAGTTCTTGACCGACAAGAAGGAGGGTCTCGAGCT
GGACGCCAAGACCATCAAGGTCCACGGTTTCTAAAGCGCAATGGTCGTAA
GACCTTGACTACCGTCCAGGGTCTTCCTAAGAAGTTCGATCAGAAGAAGA
TCTTGAAGGTCATCAAGAAGAAGTTCGACCCCTTCGCCGAAGCTGACGAA
GACACCGGCGAGACTAAACAGTCTCAAAATTACATCCATATACGGATTCA
ACATGTCCATCGAAAACCTCAAGACCTTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SUI1ATCC64974_94880Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_94880-T1ATCC64974_94880-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_94880-T1.cdsATCC64974_94880-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_94880-T1.exon4ATCC64974_94880-T1.exon4Aspergillus niger N402exon
ATCC64974_94880-T1.exon3ATCC64974_94880-T1.exon3Aspergillus niger N402exon
ATCC64974_94880-T1.exon2ATCC64974_94880-T1.exon2Aspergillus niger N402exon
ATCC64974_94880-T1.exon1ATCC64974_94880-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036877
DBxrefInterPro:IPR005874
DBxrefInterPro:IPR001950
DBxrefPFAM:PF01253
ProductEukaryotic translation initiation factor eIF-1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:2495089..2495843 -
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