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ATCC64974_95140-T1, ATCC64974_95140-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_95140-T1
Unique NameATCC64974_95140-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:2580725..2581856-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_95140-T1 ID=ATCC64974_95140-T1|Name=ATCC64974_95140-T1|organism=Aspergillus niger N402|type=mRNA|length=1132bp|location=Sequence derived from alignment at OGUI01000016.1:2580725..2581856- (Aspergillus niger N402)
ATGAGTATTTACAGTTTCCTCATTGCAGTCCGTTCCGAAGGTCAGCAGCT
TATGAGCGACACCGGAGAGACAACGTCGCATTTGATGGGCATGTTCTACC
GCACTCTGCGCATGGTCGACAATGGGATCAAGCCTCTGTACGTATTTGAC
GGAGCTCCCCCAAAGCTCAAGTCCGGCGAACTGGCCAAGCGATTTGCTCG
GAAGAGCGAAGCCACCGAGGCTCACGAGGAGGCCAAGGAAACCGGTACGG
CAGAAGACGTTGAGAAATTCTCGCGACGCACAGTACGAGTCACCAGGGAG
CACAACGCAGAATGTAAGAAACTTTTGAAGTTGATGGGCATTCCGTACAT
CGATGCCCCCACGGAAGCCGAGGCGCAGTGCGCGGTTCTCGCGCGCGCTG
GAAAGGTCTATGCAGCTGCTTCGGAGGATATGGACACGCTATGCTTTGAG
ACACCAATTCTTCTGCGCCACCTTACGTTCAGTGAACAAAGAAAGGAACC
CATTCAGGAGATCCATTTGAATCGTGCGCTGGAGGGGCTGGGTATGGACC
GCAAGCAGGTATGTTCTTTGGGGTACCTACGTTTCAAGGAAGCTTACTGA
TGCAACATAGTTCATTGATCTTTGTATTTTGCTGGGTTGTGATTATCTGG
AGCCGATCCCCAAGGTCGGGCCTAACACGGCGCTGAAGCTAATCCGTGAT
CACGGAAGTCTGGAGAAGGTGCTTGAGTTTATGGAGAACGATCCGAAGAA
GAAGTTTGTCGTCCCTGAGGATTGGCCCTATGAGGATGCCAGAGAGCTTT
TCCTGAACCCAGATGTGAGGGACGCCAATGACCCCGAATGCGACTTCAAA
TGGGAAGCGCCCGACGTGCCCGGTCTGGTAGACTTCCTGGTCAAAGACAA
GGGCTTCAACGAGGACCGCGTCAAGAACGGTGCTGCCCGCTTGCAAAAGA
ACCTGAAATCTGCTCAGCAATCCCGCCTAGAGGGCTTTTTCAAGCCGGTC
GCCCGCACGGATGAAGAGAAGGCGAGCCTAAAGCGCAAGCACGACGAAAA
GATTCAGGAGCAGAAAAAGAAGAAGAAGGAAGAGGCCAAGGCCAAGAAAG
AGGCCAAGTCACGGCCTCGCGGTGCTGGTTGA
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Coding sequence (CDS) from alignment at OGUI01000016.1:2580725..2581856-

>ATCC64974_95140-T1 ID=ATCC64974_95140-T1|Name=ATCC64974_95140-T1|organism=Aspergillus niger N402|type=CDS|length=2160bp|location=Sequence derived from alignment at OGUI01000016.1:2580725..2581856- (Aspergillus niger N402)
TTCATTGATCTTTGTATTTTGCTGGGTTGTGATTATCTGGAGCCGATCCC
CAAGGTCGGGCCTAACACGGCGCTGAAGCTAATCCGTGATCACGGAAGTC
TGGAGAAGGTGCTTGAGTTTATGGAGAACGATCCGAAGAAGAAGTTTGTC
GTCCCTGAGGATTGGCCCTATGAGGATGCCAGAGAGCTTTTCCTGAACCC
AGATGTGAGGGACGCCAATGACCCCGAATGCGACTTCAAATGGGAAGCGC
CCGACGTGCCCGGTCTGGTAGACTTCCTGGTCAAAGACAAGGGCTTCAAC
GAGGACCGCGTCAAGAACGGTGCTGCCCGCTTGCAAAAGAACCTGAAATC
TGCTCAGCAATCCCGCCTAGAGGGCTTTTTCAAGCCGGTCGCCCGCACGG
ATGAAGAGAAGGCGAGCCTAAAGCGCAAGCACGACGAAAAGATTCAGGAG
CAGAAAAAGAAGAAGAAGGAAGAGGCCAAGGCCAAGAAAGAGGCCAAGTC
ACGGCCTCGCGGTGCTGGTTGAATGAGTATTTACAGTTTCCTCATTGCAG
TCCGTTCCGAAGGTCAGCAGCTTATGAGCGACACCGGAGAGACAACGTCG
CATTTGATGGGCATGTTCTACCGCACTCTGCGCATGGTCGACAATGGGAT
CAAGCCTCTGTACGTATTTGACGGAGCTCCCCCAAAGCTCAAGTCCGGCG
AACTGGCCAAGCGATTTGCTCGGAAGAGCGAAGCCACCGAGGCTCACGAG
GAGGCCAAGGAAACCGGTACGGCAGAAGACGTTGAGAAATTCTCGCGACG
CACAGTACGAGTCACCAGGGAGCACAACGCAGAATGTAAGAAACTTTTGA
AGTTGATGGGCATTCCGTACATCGATGCCCCCACGGAAGCCGAGGCGCAG
TGCGCGGTTCTCGCGCGCGCTGGAAAGGTCTATGCAGCTGCTTCGGAGGA
TATGGACACGCTATGCTTTGAGACACCAATTCTTCTGCGCCACCTTACGT
TCAGTGAACAAAGAAAGGAACCCATTCAGGAGATCCATTTGAATCGTGCG
CTGGAGGGGCTGGGTATGGACCGCAAGCAGTTCATTGATCTTTGTATTTT
GCTGGGTTGTGATTATCTGGAGCCGATCCCCAAGGTCGGGCCTAACACGG
CGCTGAAGCTAATCCGTGATCACGGAAGTCTGGAGAAGGTGCTTGAGTTT
ATGGAGAACGATCCGAAGAAGAAGTTTGTCGTCCCTGAGGATTGGCCCTA
TGAGGATGCCAGAGAGCTTTTCCTGAACCCAGATGTGAGGGACGCCAATG
ACCCCGAATGCGACTTCAAATGGGAAGCGCCCGACGTGCCCGGTCTGGTA
GACTTCCTGGTCAAAGACAAGGGCTTCAACGAGGACCGCGTCAAGAACGG
TGCTGCCCGCTTGCAAAAGAACCTGAAATCTGCTCAGCAATCCCGCCTAG
AGGGCTTTTTCAAGCCGGTCGCCCGCACGGATGAAGAGAAGGCGAGCCTA
AAGCGCAAGCACGACGAAAAGATTCAGGAGCAGAAAAAGAAGAAGAAGGA
AGAGGCCAAGGCCAAGAAAGAGGCCAAGTCACGGCCTCGCGGTGCTGGTT
GAATGAGTATTTACAGTTTCCTCATTGCAGTCCGTTCCGAAGGTCAGCAG
CTTATGAGCGACACCGGAGAGACAACGTCGCATTTGATGGGCATGTTCTA
CCGCACTCTGCGCATGGTCGACAATGGGATCAAGCCTCTGTACGTATTTG
ACGGAGCTCCCCCAAAGCTCAAGTCCGGCGAACTGGCCAAGCGATTTGCT
CGGAAGAGCGAAGCCACCGAGGCTCACGAGGAGGCCAAGGAAACCGGTAC
GGCAGAAGACGTTGAGAAATTCTCGCGACGCACAGTACGAGTCACCAGGG
AGCACAACGCAGAATGTAAGAAACTTTTGAAGTTGATGGGCATTCCGTAC
ATCGATGCCCCCACGGAAGCCGAGGCGCAGTGCGCGGTTCTCGCGCGCGC
TGGAAAGGTCTATGCAGCTGCTTCGGAGGATATGGACACGCTATGCTTTG
AGACACCAATTCTTCTGCGCCACCTTACGTTCAGTGAACAAAGAAAGGAA
CCCATTCAGGAGATCCATTTGAATCGTGCGCTGGAGGGGCTGGGTATGGA
CCGCAAGCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016788hydrolase activity, acting on ester bonds
GO:0003677DNA binding
GO:0003824catalytic activity
GO:0004518nuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
FEN1ATCC64974_95140Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_95140-T1ATCC64974_95140-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_95140-T1.cdsATCC64974_95140-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_95140-T1.exon2ATCC64974_95140-T1.exon2Aspergillus niger N402exon
ATCC64974_95140-T1.exon1ATCC64974_95140-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG092634B1
DBxrefInterPro:IPR036279
DBxrefInterPro:IPR029060
DBxrefInterPro:IPR023426
DBxrefInterPro:IPR019974
DBxrefInterPro:IPR006086
DBxrefInterPro:IPR008918
DBxrefInterPro:IPR006085
DBxrefInterPro:IPR006084
DBxrefPFAM:PF00752
DBxrefPFAM:PF00867
ProductElongation of fatty acids protein 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:2580725..2581856 -
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