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ATCC64974_9540-T1, ATCC64974_9540-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_9540-T1
Unique NameATCC64974_9540-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:683937..685276-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_9540-T1 ID=ATCC64974_9540-T1|Name=ATCC64974_9540-T1|organism=Aspergillus niger N402|type=mRNA|length=1340bp|location=Sequence derived from alignment at OGUI01000002.1:683937..685276- (Aspergillus niger N402)
ATGAGTTTGAAGGGCTTTCAGAAGAGCATTGTCCGCGCTCCACAACAGTT
CAAGGCCAAGTTCAATATTGGCGAGCATACCAAGGACCCTGTCTACCTGG
ACGCTGAGCGACGATTTCAAGAACTCGAAAAGGAGACCAAGAAGCTGCAC
GATGAGTCCAAGAAGTACTTCGATGCCATCAACGGTACACACGGATCCCC
CGTCTCGCAGCTACCCCTCCTTTTGCTGACTGGCGTATTTTTCCAGGCAT
GTTGAACCACCAGATTGGATTCTCCAAAGCGATGACGGAACTCTACAAAC
CCATCTCCGGTCGTGCTTCCGACCCTAGCTCCTATACAATCGAGGGTAAT
CCGGAGGGTATCCGGGCATGTGAGGAATACGAGGCGATTGTGCGGGACCT
CCAAGAATCGCTGGTGCCCGAGTTAGAGATGATCGACACCCGCGTCATCA
GCCCTGCACAGCAGCTATTGGAGGTAATCAAGGTGATCCGCAAAGTCGCG
GTGAAGCGAGACCACAAGAAACTGGACTACGACCGCCACAAGAACTCGCT
CAAGAAGCTTCAGGATAAAAAGGACAAGTCACTGAAGGATGAGAAGGCGC
TTTACAAGGCAGAAAATGATGTGGAACAAGCGACTCAGGACTACAACTAC
TACAACGACCTGCTCAAGGACGAGTTGCCCAAGCTGTTCGCTCTGGAGGC
TGAATTCATCCGTCCTCTGTTCCAGTCCTTCTACTACATGCAACTGAACG
TCTTCTACACACTACACGAGCGAATGCAGGGCATCAATATCGGTTACTTC
GACCTGAATCTGGACATCGAGGAAGCGTTCGAGAACAAGCGCGGAGACGT
CAAGGAGCGCGCCGAGGAGCTCAGCATCGTCCACTTTAAAGCCACGGGCG
GGCGCAAACCCGGCTCGAAGCTTGGCCCCAAGGACAAACTGGCGCAAGAG
GGCAAGAGTGGTTACGCCTCACGTCAGCGAGATCCCGATGTTGTCGAAAA
CCCCCCGCCGCCTTACTCTGCCACTGCAGGCAGCAGCTTTACCGCCGCAG
CGAAGAGCAAGCCCGCCCCTCCGCCGCCGAAACCGAAGCCCGCTCGTTTC
AGCGCTCCCGTCGAAACCGTCACGGCACTATATGACTATGAGGCCCAGGC
GCACGGCGACCTCAGCTTCTCCGCCGGGGATGTCATCGAGATCACACAGC
GAACGGATAACCAGAATGAGTGGTGGAGCGGCCGTGTTGACGGACGAGAG
GGACAATTTCCTGGTGAGCATGACCGGCTGTCATTATCAAAACATACCTC
GCTAACTTGTATTCCAGCAAACTACGTCCAGCTGAACTAG
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Coding sequence (CDS) from alignment at OGUI01000002.1:683937..685276-

>ATCC64974_9540-T1 ID=ATCC64974_9540-T1|Name=ATCC64974_9540-T1|organism=Aspergillus niger N402|type=CDS|length=3672bp|location=Sequence derived from alignment at OGUI01000002.1:683937..685276- (Aspergillus niger N402)
CAAACTACGTCCAGCTGAACTAGGCATGTTGAACCACCAGATTGGATTCT
CCAAAGCGATGACGGAACTCTACAAACCCATCTCCGGTCGTGCTTCCGAC
CCTAGCTCCTATACAATCGAGGGTAATCCGGAGGGTATCCGGGCATGTGA
GGAATACGAGGCGATTGTGCGGGACCTCCAAGAATCGCTGGTGCCCGAGT
TAGAGATGATCGACACCCGCGTCATCAGCCCTGCACAGCAGCTATTGGAG
GTAATCAAGGTGATCCGCAAAGTCGCGGTGAAGCGAGACCACAAGAAACT
GGACTACGACCGCCACAAGAACTCGCTCAAGAAGCTTCAGGATAAAAAGG
ACAAGTCACTGAAGGATGAGAAGGCGCTTTACAAGGCAGAAAATGATGTG
GAACAAGCGACTCAGGACTACAACTACTACAACGACCTGCTCAAGGACGA
GTTGCCCAAGCTGTTCGCTCTGGAGGCTGAATTCATCCGTCCTCTGTTCC
AGTCCTTCTACTACATGCAACTGAACGTCTTCTACACACTACACGAGCGA
ATGCAGGGCATCAATATCGGTTACTTCGACCTGAATCTGGACATCGAGGA
AGCGTTCGAGAACAAGCGCGGAGACGTCAAGGAGCGCGCCGAGGAGCTCA
GCATCGTCCACTTTAAAGCCACGGGCGGGCGCAAACCCGGCTCGAAGCTT
GGCCCCAAGGACAAACTGGCGCAAGAGGGCAAGAGTGGTTACGCCTCACG
TCAGCGAGATCCCGATGTTGTCGAAAACCCCCCGCCGCCTTACTCTGCCA
CTGCAGGCAGCAGCTTTACCGCCGCAGCGAAGAGCAAGCCCGCCCCTCCG
CCGCCGAAACCGAAGCCCGCTCGTTTCAGCGCTCCCGTCGAAACCGTCAC
GGCACTATATGACTATGAGGCCCAGGCGCACGGCGACCTCAGCTTCTCCG
CCGGGGATGTCATCGAGATCACACAGCGAACGGATAACCAGAATGAGTGG
TGGAGCGGCCGTGTTGACGGACGAGAGGGACAATTTCCTGATGAGTTTGA
AGGGCTTTCAGAAGAGCATTGTCCGCGCTCCACAACAGTTCAAGGCCAAG
TTCAATATTGGCGAGCATACCAAGGACCCTGTCTACCTGGACGCTGAGCG
ACGATTTCAAGAACTCGAAAAGGAGACCAAGAAGCTGCACGATGAGTCCA
AGAAGTACTTCGATGCCATCAACGCAAACTACGTCCAGCTGAACTAGGCA
TGTTGAACCACCAGATTGGATTCTCCAAAGCGATGACGGAACTCTACAAA
CCCATCTCCGGTCGTGCTTCCGACCCTAGCTCCTATACAATCGAGGGTAA
TCCGGAGGGTATCCGGGCATGTGAGGAATACGAGGCGATTGTGCGGGACC
TCCAAGAATCGCTGGTGCCCGAGTTAGAGATGATCGACACCCGCGTCATC
AGCCCTGCACAGCAGCTATTGGAGGTAATCAAGGTGATCCGCAAAGTCGC
GGTGAAGCGAGACCACAAGAAACTGGACTACGACCGCCACAAGAACTCGC
TCAAGAAGCTTCAGGATAAAAAGGACAAGTCACTGAAGGATGAGAAGGCG
CTTTACAAGGCAGAAAATGATGTGGAACAAGCGACTCAGGACTACAACTA
CTACAACGACCTGCTCAAGGACGAGTTGCCCAAGCTGTTCGCTCTGGAGG
CTGAATTCATCCGTCCTCTGTTCCAGTCCTTCTACTACATGCAACTGAAC
GTCTTCTACACACTACACGAGCGAATGCAGGGCATCAATATCGGTTACTT
CGACCTGAATCTGGACATCGAGGAAGCGTTCGAGAACAAGCGCGGAGACG
TCAAGGAGCGCGCCGAGGAGCTCAGCATCGTCCACTTTAAAGCCACGGGC
GGGCGCAAACCCGGCTCGAAGCTTGGCCCCAAGGACAAACTGGCGCAAGA
GGGCAAGAGTGGTTACGCCTCACGTCAGCGAGATCCCGATGTTGTCGAAA
ACCCCCCGCCGCCTTACTCTGCCACTGCAGGCAGCAGCTTTACCGCCGCA
GCGAAGAGCAAGCCCGCCCCTCCGCCGCCGAAACCGAAGCCCGCTCGTTT
CAGCGCTCCCGTCGAAACCGTCACGGCACTATATGACTATGAGGCCCAGG
CGCACGGCGACCTCAGCTTCTCCGCCGGGGATGTCATCGAGATCACACAG
CGAACGGATAACCAGAATGAGTGGTGGAGCGGCCGTGTTGACGGACGAGA
GGGACAATTTCCTGATGAGTTTGAAGGGCTTTCAGAAGAGCATTGTCCGC
GCTCCACAACAGTTCAAGGCCAAGTTCAATATTGGCGAGCATACCAAGGA
CCCTGTCTACCTGGACGCTGAGCGACGATTTCAAGAACTCGAAAAGGAGA
CCAAGAAGCTGCACGATGAGTCCAAGAAGTACTTCGATGCCATCAACGCA
AACTACGTCCAGCTGAACTAGGCATGTTGAACCACCAGATTGGATTCTCC
AAAGCGATGACGGAACTCTACAAACCCATCTCCGGTCGTGCTTCCGACCC
TAGCTCCTATACAATCGAGGGTAATCCGGAGGGTATCCGGGCATGTGAGG
AATACGAGGCGATTGTGCGGGACCTCCAAGAATCGCTGGTGCCCGAGTTA
GAGATGATCGACACCCGCGTCATCAGCCCTGCACAGCAGCTATTGGAGGT
AATCAAGGTGATCCGCAAAGTCGCGGTGAAGCGAGACCACAAGAAACTGG
ACTACGACCGCCACAAGAACTCGCTCAAGAAGCTTCAGGATAAAAAGGAC
AAGTCACTGAAGGATGAGAAGGCGCTTTACAAGGCAGAAAATGATGTGGA
ACAAGCGACTCAGGACTACAACTACTACAACGACCTGCTCAAGGACGAGT
TGCCCAAGCTGTTCGCTCTGGAGGCTGAATTCATCCGTCCTCTGTTCCAG
TCCTTCTACTACATGCAACTGAACGTCTTCTACACACTACACGAGCGAAT
GCAGGGCATCAATATCGGTTACTTCGACCTGAATCTGGACATCGAGGAAG
CGTTCGAGAACAAGCGCGGAGACGTCAAGGAGCGCGCCGAGGAGCTCAGC
ATCGTCCACTTTAAAGCCACGGGCGGGCGCAAACCCGGCTCGAAGCTTGG
CCCCAAGGACAAACTGGCGCAAGAGGGCAAGAGTGGTTACGCCTCACGTC
AGCGAGATCCCGATGTTGTCGAAAACCCCCCGCCGCCTTACTCTGCCACT
GCAGGCAGCAGCTTTACCGCCGCAGCGAAGAGCAAGCCCGCCCCTCCGCC
GCCGAAACCGAAGCCCGCTCGTTTCAGCGCTCCCGTCGAAACCGTCACGG
CACTATATGACTATGAGGCCCAGGCGCACGGCGACCTCAGCTTCTCCGCC
GGGGATGTCATCGAGATCACACAGCGAACGGATAACCAGAATGAGTGGTG
GAGCGGCCGTGTTGACGGACGAGAGGGACAATTTCCTGATGAGTTTGAAG
GGCTTTCAGAAGAGCATTGTCCGCGCTCCACAACAGTTCAAGGCCAAGTT
CAATATTGGCGAGCATACCAAGGACCCTGTCTACCTGGACGCTGAGCGAC
GATTTCAAGAACTCGAAAAGGAGACCAAGAAGCTGCACGATGAGTCCAAG
AAGTACTTCGATGCCATCAACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_9540ATCC64974_9540Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9540-T1ATCC64974_9540-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9540-T1.cdsATCC64974_9540-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9540-T1.exon3ATCC64974_9540-T1.exon3Aspergillus niger N402exon
ATCC64974_9540-T1.exon2ATCC64974_9540-T1.exon2Aspergillus niger N402exon
ATCC64974_9540-T1.exon1ATCC64974_9540-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09262PPU
DBxrefInterPro:IPR036028
DBxrefInterPro:IPR027267
DBxrefInterPro:IPR004148
DBxrefInterPro:IPR001452
DBxrefPFAM:PF14604
DBxrefPFAM:PF07653
DBxrefPFAM:PF00018
DBxrefPFAM:PF03114
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:683937..685276 -
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