You are here

Home

ATCC64974_95640-T1, ATCC64974_95640-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_95640-T1
Unique NameATCC64974_95640-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:2754385..2756013-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_95640-T1 ID=ATCC64974_95640-T1|Name=ATCC64974_95640-T1|organism=Aspergillus niger N402|type=mRNA|length=1629bp|location=Sequence derived from alignment at OGUI01000016.1:2754385..2756013- (Aspergillus niger N402)
ATGTCTTCCACTTCAGCCCAAGAAATCCCTGAGAAGGCACCTGATGATTC
TTCCAAGCTGAAGACTTTCTTGTCCATCCTCCGCAAGTACGTGGGACTTT
GACATGGGCTACACCGTTGCTCACTGCCCGGTACCTCTCACCGGTAGTTT
GTGCTGATAGGTCTGGGTGGTCTTGCCAGGTTCGTCGGAGTGGCCGACAT
CGCGTCTGTTCGTTTCTCGTTGCCAGCGCATCTTCTAGAACCCACGCCAA
ATCTGGGTAAGCTGTCTCCTGTGCTATCTATCGCACATGAATCATCTCCC
ATCAGCGGACTGCTAATATAGATTTGCTTGCCCAATCAGAATATTGGAAT
TACCTAGACAGACCGGAGGCCTTCGCAAGGTCAGCAAGATAGCCTATTCA
TAATTAGGGCTTGGTGTTCTCTGACATGGTTGTCACAGCATTGGTCAATC
GGAAGATCCGCTGGGACGCACGCTGGAGGTTCTGAGATTCTGGTTTACCA
AGGACTTGGTATAATGCCCCCAATCAGTCTGCATTGTCAATCAGTGGCAG
TTCATTGACCAGATCGCAGAAATACATCAAAGGCAAACCATGCAAGCCGT
ACAATTCTACATTGGGGGAATTTTTCAGAGTAGGTTTGAGGCGGAGACCT
TGTGGCGTAAGTTGATGGTATATTCTGACTTGCCTGGAACTAGTGCACCT
GGGAAGTAGATCAGACGCTCCCAGAAGTCTCGCCGACTCCAAAAGCTTTC
TCCAACGCAAAGGACAGCAGCACAGATCCCGTCAAGATTTGCTACTTAAC
TGAACAAACATCTCACCACCCTCCGGTTTCTGCCTTTTTTATAGACTGCC
CGGATACAGGGGTCTCTGCGCGTGGTTTTGACCAGATCAGTGCCAAGTTC
ACAGGCACCAGCATCCGGGTCGCTCCTGGCCAGCACAACCTGGGAATCTT
CGTCAACTTGAAAAACAGAGATAATGAGGAATACCACTTGACCCATCCTG
CAGCACACCTTGGTGGTCTCCTCAGAGGCGCTTTGGCGATCTCTGTCTCA
GACACTTGTTACATTACTTGCGCCAAGACGCGCATCAAAGTCATTTTACA
GTACTTGGAGGAGGGCTGGATTGGTCGAGCGCAGAATAAGGTTGAGGGTG
TGATCTTTCGATACGATCCGGATAAGGACGTCACCACGAGAATCAAAGAT
GTACCCGAAGGCGATGTTCTTGCCCGGATCAGCGGTTCTTGGCATGGGCA
AGTTTTCTACACGTTGGCCGGTACAAACGAACCTCGGCTTTTGATCGATG
TCACACCCCTCTTCCCAGTCGCGAAGACGCTGCCTCCGGAAGAGAGTCAA
CTATCCAACGAATCCCGCAAATTTTGGTCTTCGGTTACCGAAGCTATCGT
CGACAAAAAGTACGGCCAGGCTACCAAGCTCAAACAAGACATCGAAGAGC
GACAACGGCAAAAGGCCGCAGAGCGTCAGAACAAGAACGAAACGTGGCAG
CCTCGTTTCTTCACCGGCGCTGTCACGCCTTTGGGAAGACCTGAGCTAAC
AGATGAAGGGCTGAAGGTACTCGATGGGCTACGCAGCGGTGATTATAGGT
TGGACGAGAGTCTTACAAAGGGTGCATAG
back to top

Coding sequence (CDS) from alignment at OGUI01000016.1:2754385..2756013-

>ATCC64974_95640-T1 ID=ATCC64974_95640-T1|Name=ATCC64974_95640-T1|organism=Aspergillus niger N402|type=CDS|length=7614bp|location=Sequence derived from alignment at OGUI01000016.1:2754385..2756013- (Aspergillus niger N402)
TGCACCTGGGAAGTAGATCAGACGCTCCCAGAAGTCTCGCCGACTCCAAA
AGCTTTCTCCAACGCAAAGGACAGCAGCACAGATCCCGTCAAGATTTGCT
ACTTAACTGAACAAACATCTCACCACCCTCCGGTTTCTGCCTTTTTTATA
GACTGCCCGGATACAGGGGTCTCTGCGCGTGGTTTTGACCAGATCAGTGC
CAAGTTCACAGGCACCAGCATCCGGGTCGCTCCTGGCCAGCACAACCTGG
GAATCTTCGTCAACTTGAAAAACAGAGATAATGAGGAATACCACTTGACC
CATCCTGCAGCACACCTTGGTGGTCTCCTCAGAGGCGCTTTGGCGATCTC
TGTCTCAGACACTTGTTACATTACTTGCGCCAAGACGCGCATCAAAGTCA
TTTTACAGTACTTGGAGGAGGGCTGGATTGGTCGAGCGCAGAATAAGGTT
GAGGGTGTGATCTTTCGATACGATCCGGATAAGGACGTCACCACGAGAAT
CAAAGATGTACCCGAAGGCGATGTTCTTGCCCGGATCAGCGGTTCTTGGC
ATGGGCAAGTTTTCTACACGTTGGCCGGTACAAACGAACCTCGGCTTTTG
ATCGATGTCACACCCCTCTTCCCAGTCGCGAAGACGCTGCCTCCGGAAGA
GAGTCAACTATCCAACGAATCCCGCAAATTTTGGTCTTCGGTTACCGAAG
CTATCGTCGACAAAAAGTACGGCCAGGCTACCAAGCTCAAACAAGACATC
GAAGAGCGACAACGGCAAAAGGCCGCAGAGCGTCAGAACAAGAACGAAAC
GTGGCAGCCTCGTTTCTTCACCGGCGCTGTCACGCCTTTGGGAAGACCTG
AGCTAACAGATGAAGGGCTGAAGGTACTCGATGGGCTACGCAGCGGTGAT
TATAGGTTGGACGAGAGTCTTACAAAGGGTGCATAGAAATACATCAAAGG
CAAACCATGCAAGCCGTACAATTCTACATTGGGGGAATTTTTCAGACATT
GGTCAATCGGAAGATCCGCTGGGACGCACGCTGGAGGTTCTGAGATTCTG
GTTTACCAAGGACTTGAATATTGGAATTACCTAGACAGACCGGAGGCCTT
CGCAAGGTTCGTCGGAGTGGCCGACATCGCGTCTGTTCGTTTCTCGTTGC
CAGCGCATCTTCTAGAACCCACGCCAAATCTGGATGTCTTCCACTTCAGC
CCAAGAAATCCCTGAGAAGGCACCTGATGATTCTTCCAAGCTGAAGACTT
TCTTGTCCATCCTCCGCAATGCACCTGGGAAGTAGATCAGACGCTCCCAG
AAGTCTCGCCGACTCCAAAAGCTTTCTCCAACGCAAAGGACAGCAGCACA
GATCCCGTCAAGATTTGCTACTTAACTGAACAAACATCTCACCACCCTCC
GGTTTCTGCCTTTTTTATAGACTGCCCGGATACAGGGGTCTCTGCGCGTG
GTTTTGACCAGATCAGTGCCAAGTTCACAGGCACCAGCATCCGGGTCGCT
CCTGGCCAGCACAACCTGGGAATCTTCGTCAACTTGAAAAACAGAGATAA
TGAGGAATACCACTTGACCCATCCTGCAGCACACCTTGGTGGTCTCCTCA
GAGGCGCTTTGGCGATCTCTGTCTCAGACACTTGTTACATTACTTGCGCC
AAGACGCGCATCAAAGTCATTTTACAGTACTTGGAGGAGGGCTGGATTGG
TCGAGCGCAGAATAAGGTTGAGGGTGTGATCTTTCGATACGATCCGGATA
AGGACGTCACCACGAGAATCAAAGATGTACCCGAAGGCGATGTTCTTGCC
CGGATCAGCGGTTCTTGGCATGGGCAAGTTTTCTACACGTTGGCCGGTAC
AAACGAACCTCGGCTTTTGATCGATGTCACACCCCTCTTCCCAGTCGCGA
AGACGCTGCCTCCGGAAGAGAGTCAACTATCCAACGAATCCCGCAAATTT
TGGTCTTCGGTTACCGAAGCTATCGTCGACAAAAAGTACGGCCAGGCTAC
CAAGCTCAAACAAGACATCGAAGAGCGACAACGGCAAAAGGCCGCAGAGC
GTCAGAACAAGAACGAAACGTGGCAGCCTCGTTTCTTCACCGGCGCTGTC
ACGCCTTTGGGAAGACCTGAGCTAACAGATGAAGGGCTGAAGGTACTCGA
TGGGCTACGCAGCGGTGATTATAGGTTGGACGAGAGTCTTACAAAGGGTG
CATAGAAATACATCAAAGGCAAACCATGCAAGCCGTACAATTCTACATTG
GGGGAATTTTTCAGACATTGGTCAATCGGAAGATCCGCTGGGACGCACGC
TGGAGGTTCTGAGATTCTGGTTTACCAAGGACTTGAATATTGGAATTACC
TAGACAGACCGGAGGCCTTCGCAAGGTTCGTCGGAGTGGCCGACATCGCG
TCTGTTCGTTTCTCGTTGCCAGCGCATCTTCTAGAACCCACGCCAAATCT
GGATGTCTTCCACTTCAGCCCAAGAAATCCCTGAGAAGGCACCTGATGAT
TCTTCCAAGCTGAAGACTTTCTTGTCCATCCTCCGCAATGCACCTGGGAA
GTAGATCAGACGCTCCCAGAAGTCTCGCCGACTCCAAAAGCTTTCTCCAA
CGCAAAGGACAGCAGCACAGATCCCGTCAAGATTTGCTACTTAACTGAAC
AAACATCTCACCACCCTCCGGTTTCTGCCTTTTTTATAGACTGCCCGGAT
ACAGGGGTCTCTGCGCGTGGTTTTGACCAGATCAGTGCCAAGTTCACAGG
CACCAGCATCCGGGTCGCTCCTGGCCAGCACAACCTGGGAATCTTCGTCA
ACTTGAAAAACAGAGATAATGAGGAATACCACTTGACCCATCCTGCAGCA
CACCTTGGTGGTCTCCTCAGAGGCGCTTTGGCGATCTCTGTCTCAGACAC
TTGTTACATTACTTGCGCCAAGACGCGCATCAAAGTCATTTTACAGTACT
TGGAGGAGGGCTGGATTGGTCGAGCGCAGAATAAGGTTGAGGGTGTGATC
TTTCGATACGATCCGGATAAGGACGTCACCACGAGAATCAAAGATGTACC
CGAAGGCGATGTTCTTGCCCGGATCAGCGGTTCTTGGCATGGGCAAGTTT
TCTACACGTTGGCCGGTACAAACGAACCTCGGCTTTTGATCGATGTCACA
CCCCTCTTCCCAGTCGCGAAGACGCTGCCTCCGGAAGAGAGTCAACTATC
CAACGAATCCCGCAAATTTTGGTCTTCGGTTACCGAAGCTATCGTCGACA
AAAAGTACGGCCAGGCTACCAAGCTCAAACAAGACATCGAAGAGCGACAA
CGGCAAAAGGCCGCAGAGCGTCAGAACAAGAACGAAACGTGGCAGCCTCG
TTTCTTCACCGGCGCTGTCACGCCTTTGGGAAGACCTGAGCTAACAGATG
AAGGGCTGAAGGTACTCGATGGGCTACGCAGCGGTGATTATAGGTTGGAC
GAGAGTCTTACAAAGGGTGCATAGAAATACATCAAAGGCAAACCATGCAA
GCCGTACAATTCTACATTGGGGGAATTTTTCAGACATTGGTCAATCGGAA
GATCCGCTGGGACGCACGCTGGAGGTTCTGAGATTCTGGTTTACCAAGGA
CTTGAATATTGGAATTACCTAGACAGACCGGAGGCCTTCGCAAGGTTCGT
CGGAGTGGCCGACATCGCGTCTGTTCGTTTCTCGTTGCCAGCGCATCTTC
TAGAACCCACGCCAAATCTGGATGTCTTCCACTTCAGCCCAAGAAATCCC
TGAGAAGGCACCTGATGATTCTTCCAAGCTGAAGACTTTCTTGTCCATCC
TCCGCAATGCACCTGGGAAGTAGATCAGACGCTCCCAGAAGTCTCGCCGA
CTCCAAAAGCTTTCTCCAACGCAAAGGACAGCAGCACAGATCCCGTCAAG
ATTTGCTACTTAACTGAACAAACATCTCACCACCCTCCGGTTTCTGCCTT
TTTTATAGACTGCCCGGATACAGGGGTCTCTGCGCGTGGTTTTGACCAGA
TCAGTGCCAAGTTCACAGGCACCAGCATCCGGGTCGCTCCTGGCCAGCAC
AACCTGGGAATCTTCGTCAACTTGAAAAACAGAGATAATGAGGAATACCA
CTTGACCCATCCTGCAGCACACCTTGGTGGTCTCCTCAGAGGCGCTTTGG
CGATCTCTGTCTCAGACACTTGTTACATTACTTGCGCCAAGACGCGCATC
AAAGTCATTTTACAGTACTTGGAGGAGGGCTGGATTGGTCGAGCGCAGAA
TAAGGTTGAGGGTGTGATCTTTCGATACGATCCGGATAAGGACGTCACCA
CGAGAATCAAAGATGTACCCGAAGGCGATGTTCTTGCCCGGATCAGCGGT
TCTTGGCATGGGCAAGTTTTCTACACGTTGGCCGGTACAAACGAACCTCG
GCTTTTGATCGATGTCACACCCCTCTTCCCAGTCGCGAAGACGCTGCCTC
CGGAAGAGAGTCAACTATCCAACGAATCCCGCAAATTTTGGTCTTCGGTT
ACCGAAGCTATCGTCGACAAAAAGTACGGCCAGGCTACCAAGCTCAAACA
AGACATCGAAGAGCGACAACGGCAAAAGGCCGCAGAGCGTCAGAACAAGA
ACGAAACGTGGCAGCCTCGTTTCTTCACCGGCGCTGTCACGCCTTTGGGA
AGACCTGAGCTAACAGATGAAGGGCTGAAGGTACTCGATGGGCTACGCAG
CGGTGATTATAGGTTGGACGAGAGTCTTACAAAGGGTGCATAGAAATACA
TCAAAGGCAAACCATGCAAGCCGTACAATTCTACATTGGGGGAATTTTTC
AGACATTGGTCAATCGGAAGATCCGCTGGGACGCACGCTGGAGGTTCTGA
GATTCTGGTTTACCAAGGACTTGAATATTGGAATTACCTAGACAGACCGG
AGGCCTTCGCAAGGTTCGTCGGAGTGGCCGACATCGCGTCTGTTCGTTTC
TCGTTGCCAGCGCATCTTCTAGAACCCACGCCAAATCTGGATGTCTTCCA
CTTCAGCCCAAGAAATCCCTGAGAAGGCACCTGATGATTCTTCCAAGCTG
AAGACTTTCTTGTCCATCCTCCGCAATGCACCTGGGAAGTAGATCAGACG
CTCCCAGAAGTCTCGCCGACTCCAAAAGCTTTCTCCAACGCAAAGGACAG
CAGCACAGATCCCGTCAAGATTTGCTACTTAACTGAACAAACATCTCACC
ACCCTCCGGTTTCTGCCTTTTTTATAGACTGCCCGGATACAGGGGTCTCT
GCGCGTGGTTTTGACCAGATCAGTGCCAAGTTCACAGGCACCAGCATCCG
GGTCGCTCCTGGCCAGCACAACCTGGGAATCTTCGTCAACTTGAAAAACA
GAGATAATGAGGAATACCACTTGACCCATCCTGCAGCACACCTTGGTGGT
CTCCTCAGAGGCGCTTTGGCGATCTCTGTCTCAGACACTTGTTACATTAC
TTGCGCCAAGACGCGCATCAAAGTCATTTTACAGTACTTGGAGGAGGGCT
GGATTGGTCGAGCGCAGAATAAGGTTGAGGGTGTGATCTTTCGATACGAT
CCGGATAAGGACGTCACCACGAGAATCAAAGATGTACCCGAAGGCGATGT
TCTTGCCCGGATCAGCGGTTCTTGGCATGGGCAAGTTTTCTACACGTTGG
CCGGTACAAACGAACCTCGGCTTTTGATCGATGTCACACCCCTCTTCCCA
GTCGCGAAGACGCTGCCTCCGGAAGAGAGTCAACTATCCAACGAATCCCG
CAAATTTTGGTCTTCGGTTACCGAAGCTATCGTCGACAAAAAGTACGGCC
AGGCTACCAAGCTCAAACAAGACATCGAAGAGCGACAACGGCAAAAGGCC
GCAGAGCGTCAGAACAAGAACGAAACGTGGCAGCCTCGTTTCTTCACCGG
CGCTGTCACGCCTTTGGGAAGACCTGAGCTAACAGATGAAGGGCTGAAGG
TACTCGATGGGCTACGCAGCGGTGATTATAGGTTGGACGAGAGTCTTACA
AAGGGTGCATAGAAATACATCAAAGGCAAACCATGCAAGCCGTACAATTC
TACATTGGGGGAATTTTTCAGACATTGGTCAATCGGAAGATCCGCTGGGA
CGCACGCTGGAGGTTCTGAGATTCTGGTTTACCAAGGACTTGAATATTGG
AATTACCTAGACAGACCGGAGGCCTTCGCAAGGTTCGTCGGAGTGGCCGA
CATCGCGTCTGTTCGTTTCTCGTTGCCAGCGCATCTTCTAGAACCCACGC
CAAATCTGGATGTCTTCCACTTCAGCCCAAGAAATCCCTGAGAAGGCACC
TGATGATTCTTCCAAGCTGAAGACTTTCTTGTCCATCCTCCGCAATGCAC
CTGGGAAGTAGATCAGACGCTCCCAGAAGTCTCGCCGACTCCAAAAGCTT
TCTCCAACGCAAAGGACAGCAGCACAGATCCCGTCAAGATTTGCTACTTA
ACTGAACAAACATCTCACCACCCTCCGGTTTCTGCCTTTTTTATAGACTG
CCCGGATACAGGGGTCTCTGCGCGTGGTTTTGACCAGATCAGTGCCAAGT
TCACAGGCACCAGCATCCGGGTCGCTCCTGGCCAGCACAACCTGGGAATC
TTCGTCAACTTGAAAAACAGAGATAATGAGGAATACCACTTGACCCATCC
TGCAGCACACCTTGGTGGTCTCCTCAGAGGCGCTTTGGCGATCTCTGTCT
CAGACACTTGTTACATTACTTGCGCCAAGACGCGCATCAAAGTCATTTTA
CAGTACTTGGAGGAGGGCTGGATTGGTCGAGCGCAGAATAAGGTTGAGGG
TGTGATCTTTCGATACGATCCGGATAAGGACGTCACCACGAGAATCAAAG
ATGTACCCGAAGGCGATGTTCTTGCCCGGATCAGCGGTTCTTGGCATGGG
CAAGTTTTCTACACGTTGGCCGGTACAAACGAACCTCGGCTTTTGATCGA
TGTCACACCCCTCTTCCCAGTCGCGAAGACGCTGCCTCCGGAAGAGAGTC
AACTATCCAACGAATCCCGCAAATTTTGGTCTTCGGTTACCGAAGCTATC
GTCGACAAAAAGTACGGCCAGGCTACCAAGCTCAAACAAGACATCGAAGA
GCGACAACGGCAAAAGGCCGCAGAGCGTCAGAACAAGAACGAAACGTGGC
AGCCTCGTTTCTTCACCGGCGCTGTCACGCCTTTGGGAAGACCTGAGCTA
ACAGATGAAGGGCTGAAGGTACTCGATGGGCTACGCAGCGGTGATTATAG
GTTGGACGAGAGTCTTACAAAGGGTGCATAGAAATACATCAAAGGCAAAC
CATGCAAGCCGTACAATTCTACATTGGGGGAATTTTTCAGACATTGGTCA
ATCGGAAGATCCGCTGGGACGCACGCTGGAGGTTCTGAGATTCTGGTTTA
CCAAGGACTTGAATATTGGAATTACCTAGACAGACCGGAGGCCTTCGCAA
GGTTCGTCGGAGTGGCCGACATCGCGTCTGTTCGTTTCTCGTTGCCAGCG
CATCTTCTAGAACCCACGCCAAATCTGGATGTCTTCCACTTCAGCCCAAG
AAATCCCTGAGAAGGCACCTGATGATTCTTCCAAGCTGAAGACTTTCTTG
TCCATCCTCCGCAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_95640ATCC64974_95640Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_95640-T1ATCC64974_95640-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_95640-T1.cdsATCC64974_95640-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_95640-T1.exon6ATCC64974_95640-T1.exon6Aspergillus niger N402exon
ATCC64974_95640-T1.exon5ATCC64974_95640-T1.exon5Aspergillus niger N402exon
ATCC64974_95640-T1.exon4ATCC64974_95640-T1.exon4Aspergillus niger N402exon
ATCC64974_95640-T1.exon3ATCC64974_95640-T1.exon3Aspergillus niger N402exon
ATCC64974_95640-T1.exon2ATCC64974_95640-T1.exon2Aspergillus niger N402exon
ATCC64974_95640-T1.exon1ATCC64974_95640-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR037239
DBxrefInterPro:IPR018494
DBxrefInterPro:IPR000648
DBxrefPFAM:PF01237
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:2754385..2756013 -
Powered by Drupal