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ATCC64974_95810-T1, ATCC64974_95810-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_95810-T1
Unique NameATCC64974_95810-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:2797805..2798389+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_95810-T1 ID=ATCC64974_95810-T1|Name=ATCC64974_95810-T1|organism=Aspergillus niger N402|type=mRNA|length=585bp|location=Sequence derived from alignment at OGUI01000016.1:2797805..2798389+ (Aspergillus niger N402)
ATGCCTCCCAAAGCCGCTGAGAAGAAGCCCAGCACCGGTGGCAAGGCCCC
GGCAGGCGGCAAGGCTCCCGCTGAGAAGAAGGAAGCCGGCAAGAAGACTG
CTGCCGCTGCCTCCGGCGACAAGAAGAAGCGTGGAAAGACCAGGAAGGAG
ACCTACTCGTCTTACATCTACAAGGGTGAGTAATCTTAAGACTTGTATTC
CTAGTCAATAGTTGTTGACTGTGTTATAGTCTTGAAGCAGGTCCACCCTG
ATACCGGTATCTCGACTCGTGCTATGTCCATCCTGAACTCCTTTGTCAAT
GGTATGTCGTGAATGAAGCAGGGTTATACCTTCAGCAAGCACCTAACGCG
GTCTAGATATCTTCGAGCGTGTCGCGACCGAGGCCTCGAAACTTGCCGCT
TACAACAAGAAGTCCACCATCTCTTCACGGGAGATCCAGACCTCGTAAGT
CCTCTGTCGATCAAGATAGTAGCAATTCGCTAACACCTCTCTAGTGTGAG
GCTCATCCTTCCCGGTGAATTGGCGAAGCACGCGGTGTCGGAAGGCACCA
AGGCTGTCACGAAGTACTCGTCGTCTGCCAAATAA
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Coding sequence (CDS) from alignment at OGUI01000016.1:2797805..2798389+

>ATCC64974_95810-T1 ID=ATCC64974_95810-T1|Name=ATCC64974_95810-T1|organism=Aspergillus niger N402|type=CDS|length=1704bp|location=Sequence derived from alignment at OGUI01000016.1:2797805..2798389+ (Aspergillus niger N402)
ATGCCTCCCAAAGCCGCTGAGAAGAAGCCCAGCACCGGTGGCAAGGCCCC
GGCAGGCGGCAAGGCTCCCGCTGAGAAGAAGGAAGCCGGCAAGAAGACTG
CTGCCGCTGCCTCCGGCGACAAGAAGAAGCGTGGAAAGACCAGGAAGGAG
ACCTACTCGTCTTACATCTACAAGGTCTTGAAGCAGGTCCACCCTGATAC
CGGTATCTCGACTCGTGCTATGTCCATCCTGAACTCCTTTGTCAATGATA
TCTTCGAGCGTGTCGCGACCGAGGCCTCGAAACTTGCCGCTTACAACAAG
AAGTCCACCATCTCTTCACGGGAGATCCAGACCTCTGTGAGGCTCATCCT
TCCCGGTGAATTGGCGAAGCACGCGGTGTCGGAAGGCACCAAGGCTGTCA
CGAAGTACTCGTCGTCTGCCAAATAAATGCCTCCCAAAGCCGCTGAGAAG
AAGCCCAGCACCGGTGGCAAGGCCCCGGCAGGCGGCAAGGCTCCCGCTGA
GAAGAAGGAAGCCGGCAAGAAGACTGCTGCCGCTGCCTCCGGCGACAAGA
AGAAGCGTGGAAAGACCAGGAAGGAGACCTACTCGTCTTACATCTACAAG
GTCTTGAAGCAGGTCCACCCTGATACCGGTATCTCGACTCGTGCTATGTC
CATCCTGAACTCCTTTGTCAATGATATCTTCGAGCGTGTCGCGACCGAGG
CCTCGAAACTTGCCGCTTACAACAAGAAGTCCACCATCTCTTCACGGGAG
ATCCAGACCTCTGTGAGGCTCATCCTTCCCGGTGAATTGGCGAAGCACGC
GGTGTCGGAAGGCACCAAGGCTGTCACGAAGTACTCGTCGTCTGCCAAAT
AAATGCCTCCCAAAGCCGCTGAGAAGAAGCCCAGCACCGGTGGCAAGGCC
CCGGCAGGCGGCAAGGCTCCCGCTGAGAAGAAGGAAGCCGGCAAGAAGAC
TGCTGCCGCTGCCTCCGGCGACAAGAAGAAGCGTGGAAAGACCAGGAAGG
AGACCTACTCGTCTTACATCTACAAGGTCTTGAAGCAGGTCCACCCTGAT
ACCGGTATCTCGACTCGTGCTATGTCCATCCTGAACTCCTTTGTCAATGA
TATCTTCGAGCGTGTCGCGACCGAGGCCTCGAAACTTGCCGCTTACAACA
AGAAGTCCACCATCTCTTCACGGGAGATCCAGACCTCTGTGAGGCTCATC
CTTCCCGGTGAATTGGCGAAGCACGCGGTGTCGGAAGGCACCAAGGCTGT
CACGAAGTACTCGTCGTCTGCCAAATAAATGCCTCCCAAAGCCGCTGAGA
AGAAGCCCAGCACCGGTGGCAAGGCCCCGGCAGGCGGCAAGGCTCCCGCT
GAGAAGAAGGAAGCCGGCAAGAAGACTGCTGCCGCTGCCTCCGGCGACAA
GAAGAAGCGTGGAAAGACCAGGAAGGAGACCTACTCGTCTTACATCTACA
AGGTCTTGAAGCAGGTCCACCCTGATACCGGTATCTCGACTCGTGCTATG
TCCATCCTGAACTCCTTTGTCAATGATATCTTCGAGCGTGTCGCGACCGA
GGCCTCGAAACTTGCCGCTTACAACAAGAAGTCCACCATCTCTTCACGGG
AGATCCAGACCTCTGTGAGGCTCATCCTTCCCGGTGAATTGGCGAAGCAC
GCGGTGTCGGAAGGCACCAAGGCTGTCACGAAGTACTCGTCGTCTGCCAA
ATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HTB1ATCC64974_95810Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_95810-T1.exon1ATCC64974_95810-T1.exon1Aspergillus niger N402exon
ATCC64974_95810-T1.exon2ATCC64974_95810-T1.exon2Aspergillus niger N402exon
ATCC64974_95810-T1.exon3ATCC64974_95810-T1.exon3Aspergillus niger N402exon
ATCC64974_95810-T1.exon4ATCC64974_95810-T1.exon4Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_95810-T1.cdsATCC64974_95810-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_95810-T1ATCC64974_95810-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR007125
DBxrefInterPro:IPR000558
DBxrefPFAM:PF00125
Producthistone H2B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:2797805..2798389 +
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