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ATCC64974_95840-T1, ATCC64974_95840-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_95840-T1
Unique NameATCC64974_95840-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000016.1:2803430..2805234-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_95840-T1 ID=ATCC64974_95840-T1|Name=ATCC64974_95840-T1|organism=Aspergillus niger N402|type=mRNA|length=1805bp|location=Sequence derived from alignment at OGUI01000016.1:2803430..2805234- (Aspergillus niger N402)
ATGGGCCAATTTCAGTCTTCGACAAGCGAAGAGAACGCCAGCTCTTCCGC
TAGATCATCCGATAAGAAACTTGATTATTACGAACTTTTACAGGTGAATT
GGGACGCATCTGCAGAGGAGTAAGCTTGCCTTGCCTTTCGGTTTTCCTAA
ATCTTGCGCATGAATTTTTTCTTGGGAATAGGGCACGCAGAATGGGGAAG
GGAATATGAAAGCGGGCCTCGAAGGGGAGACTTGGTGGGATGAGCAGCAA
AGGTATCCTGAAGCCACTAACACCCCATACTCCCTTTAGAATTAAAAAGG
CGTACAGAAGAAAAGCCCTTGAGTTGCACCCGGACCGAAACTATGGAAAT
GTGGAATCTGCTACAAAGCTTTTTGCAGAGATTCAGTCTGCTTACGAAGT
GCTTTCAGACCCTCAGGAGCGTTCGTGGTACGATACCCATCGAGATGTCT
TGTTAGGAAGCCAGGGCAGTTCTGGCAACTCGGGAACTCCATATAGTTCG
CGCACGACTACTGCAGACGATGTCTATAGGATCTTTTCTAGGTTCAGTCC
ACAAATGGAATTTTCAGATGCCTCGGATGGCTTCTACGGTGGTCTTCGTG
AGGCCTTCTCACGACTTGCCATGGAGGAAGAGATCGCTTGCCGTGGGGAA
AATATGGAATTTATTGCCTATCCTACGTTCGGGTGCCGGGGAGACGATTT
TGAAAAGGTTGTACGCCCATTTTACGTTGCATGGGGCGGCTTCTCAACAA
AGAAGTCTTTTGCATGGAAAGATGTCTATCGTTACTCAGAAGCTCCAGAC
CGTCGTGTTCGTAGACTGATGGAGAAGGAAAATAAGCGTCTGAGGGACGA
AGGCATCCGTGAATTCAACGATGCAGTTCGATCACTCGTAGCTTTCGTCA
AAAAGCGCGACCCGCGATACAAGACAAGCACTCAAAGTGAATCACAGCGC
CAGGAATTCCTCCGACAATCTGCTGCCTCCCAAGCTGCCAAATCACGGGC
TGCGAACCAAGCTAGGCTGCGAGACCATGTTACGCAAGACTGGGCAAAGT
CAGAGGAATTTGAAGATGACGAGACAGTGAGTACCGAGACAGAACTGGAA
TTTTTCGAATGTGTTGTGTGCCGCAAAAGTTTCAAGAGTTTGAATCAGTT
TGAGGCACACGAACGAAGCAAAAAGCATGTCAAAGCTATTAGGCAGCTTC
AAAAGGAAATGAGGAATGAAAACAAGCAACTAGGACTAGCGGGAGATTCA
TCAGAGTATGAAGCCCAGACTGCCATGACATTCATCCCCGATTATCAGGC
TATGCCTGTATCGGACGCCGAAAGCACACCATGCAGATCCACGTCGGGAA
ACACTCTCCCCGGCAATAATGATAATGAGGGTCGCATACCGGCACCGGAA
ATTGCCGGTGAGATCCACAGTGAACGCGTATCTCACGAAAGCCTACGGGG
CTATGTCGATCAAACCTCAGAAAGTGAAATTGACTATGCTTCAAGAGAAG
TTGTCGAAGGTCGACTCCAACTGACCGGTGATTCAACACAGGATACGACA
AATGCGGCGGCTAGTCTGTCTTCGGATTTTACGCATCTAGAGCTTGATCC
CTCCAAGCCAGCCGTTCAGAAGTTGGGCAAGGCTAAACAAAAGCGCATAA
AAAAAGCTGAACAGGCAAAAGGACAGTCCTTAGGCCCGCGGTGTACAACA
TGCAACGCTTCCTTTCCTTCACGGACCCAGCTTTTTTCACATCTTAAAGA
GTCCGATCACGCACAGGTTCAGGAGGTCACTCGGCATAGAAAGAGAAGAG
CTTAA
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Coding sequence (CDS) from alignment at OGUI01000016.1:2803430..2805234-

>ATCC64974_95840-T1 ID=ATCC64974_95840-T1|Name=ATCC64974_95840-T1|organism=Aspergillus niger N402|type=CDS|length=3270bp|location=Sequence derived from alignment at OGUI01000016.1:2803430..2805234- (Aspergillus niger N402)
AATTAAAAAGGCGTACAGAAGAAAAGCCCTTGAGTTGCACCCGGACCGAA
ACTATGGAAATGTGGAATCTGCTACAAAGCTTTTTGCAGAGATTCAGTCT
GCTTACGAAGTGCTTTCAGACCCTCAGGAGCGTTCGTGGTACGATACCCA
TCGAGATGTCTTGTTAGGAAGCCAGGGCAGTTCTGGCAACTCGGGAACTC
CATATAGTTCGCGCACGACTACTGCAGACGATGTCTATAGGATCTTTTCT
AGGTTCAGTCCACAAATGGAATTTTCAGATGCCTCGGATGGCTTCTACGG
TGGTCTTCGTGAGGCCTTCTCACGACTTGCCATGGAGGAAGAGATCGCTT
GCCGTGGGGAAAATATGGAATTTATTGCCTATCCTACGTTCGGGTGCCGG
GGAGACGATTTTGAAAAGGTTGTACGCCCATTTTACGTTGCATGGGGCGG
CTTCTCAACAAAGAAGTCTTTTGCATGGAAAGATGTCTATCGTTACTCAG
AAGCTCCAGACCGTCGTGTTCGTAGACTGATGGAGAAGGAAAATAAGCGT
CTGAGGGACGAAGGCATCCGTGAATTCAACGATGCAGTTCGATCACTCGT
AGCTTTCGTCAAAAAGCGCGACCCGCGATACAAGACAAGCACTCAAAGTG
AATCACAGCGCCAGGAATTCCTCCGACAATCTGCTGCCTCCCAAGCTGCC
AAATCACGGGCTGCGAACCAAGCTAGGCTGCGAGACCATGTTACGCAAGA
CTGGGCAAAGTCAGAGGAATTTGAAGATGACGAGACAGTGAGTACCGAGA
CAGAACTGGAATTTTTCGAATGTGTTGTGTGCCGCAAAAGTTTCAAGAGT
TTGAATCAGTTTGAGGCACACGAACGAAGCAAAAAGCATGTCAAAGCTAT
TAGGCAGCTTCAAAAGGAAATGAGGAATGAAAACAAGCAACTAGGACTAG
CGGGAGATTCATCAGAGTATGAAGCCCAGACTGCCATGACATTCATCCCC
GATTATCAGGCTATGCCTGTATCGGACGCCGAAAGCACACCATGCAGATC
CACGTCGGGAAACACTCTCCCCGGCAATAATGATAATGAGGGTCGCATAC
CGGCACCGGAAATTGCCGGTGAGATCCACAGTGAACGCGTATCTCACGAA
AGCCTACGGGGCTATGTCGATCAAACCTCAGAAAGTGAAATTGACTATGC
TTCAAGAGAAGTTGTCGAAGGTCGACTCCAACTGACCGGTGATTCAACAC
AGGATACGACAAATGCGGCGGCTAGTCTGTCTTCGGATTTTACGCATCTA
GAGCTTGATCCCTCCAAGCCAGCCGTTCAGAAGTTGGGCAAGGCTAAACA
AAAGCGCATAAAAAAAGCTGAACAGGCAAAAGGACAGTCCTTAGGCCCGC
GGTGTACAACATGCAACGCTTCCTTTCCTTCACGGACCCAGCTTTTTTCA
CATCTTAAAGAGTCCGATCACGCACAGGTTCAGGAGGTCACTCGGCATAG
AAAGAGAAGAGCTTAAATGGGCCAATTTCAGTCTTCGACAAGCGAAGAGA
ACGCCAGCTCTTCCGCTAGATCATCCGATAAGAAACTTGATTATTACGAA
CTTTTACAGGTGAATTGGGACGCATCTGCAGAGGAAATTAAAAAGGCGTA
CAGAAGAAAAGCCCTTGAGTTGCACCCGGACCGAAACTATGGAAATGTGG
AATCTGCTACAAAGCTTTTTGCAGAGATTCAGTCTGCTTACGAAGTGCTT
TCAGACCCTCAGGAGCGTTCGTGGTACGATACCCATCGAGATGTCTTGTT
AGGAAGCCAGGGCAGTTCTGGCAACTCGGGAACTCCATATAGTTCGCGCA
CGACTACTGCAGACGATGTCTATAGGATCTTTTCTAGGTTCAGTCCACAA
ATGGAATTTTCAGATGCCTCGGATGGCTTCTACGGTGGTCTTCGTGAGGC
CTTCTCACGACTTGCCATGGAGGAAGAGATCGCTTGCCGTGGGGAAAATA
TGGAATTTATTGCCTATCCTACGTTCGGGTGCCGGGGAGACGATTTTGAA
AAGGTTGTACGCCCATTTTACGTTGCATGGGGCGGCTTCTCAACAAAGAA
GTCTTTTGCATGGAAAGATGTCTATCGTTACTCAGAAGCTCCAGACCGTC
GTGTTCGTAGACTGATGGAGAAGGAAAATAAGCGTCTGAGGGACGAAGGC
ATCCGTGAATTCAACGATGCAGTTCGATCACTCGTAGCTTTCGTCAAAAA
GCGCGACCCGCGATACAAGACAAGCACTCAAAGTGAATCACAGCGCCAGG
AATTCCTCCGACAATCTGCTGCCTCCCAAGCTGCCAAATCACGGGCTGCG
AACCAAGCTAGGCTGCGAGACCATGTTACGCAAGACTGGGCAAAGTCAGA
GGAATTTGAAGATGACGAGACAGTGAGTACCGAGACAGAACTGGAATTTT
TCGAATGTGTTGTGTGCCGCAAAAGTTTCAAGAGTTTGAATCAGTTTGAG
GCACACGAACGAAGCAAAAAGCATGTCAAAGCTATTAGGCAGCTTCAAAA
GGAAATGAGGAATGAAAACAAGCAACTAGGACTAGCGGGAGATTCATCAG
AGTATGAAGCCCAGACTGCCATGACATTCATCCCCGATTATCAGGCTATG
CCTGTATCGGACGCCGAAAGCACACCATGCAGATCCACGTCGGGAAACAC
TCTCCCCGGCAATAATGATAATGAGGGTCGCATACCGGCACCGGAAATTG
CCGGTGAGATCCACAGTGAACGCGTATCTCACGAAAGCCTACGGGGCTAT
GTCGATCAAACCTCAGAAAGTGAAATTGACTATGCTTCAAGAGAAGTTGT
CGAAGGTCGACTCCAACTGACCGGTGATTCAACACAGGATACGACAAATG
CGGCGGCTAGTCTGTCTTCGGATTTTACGCATCTAGAGCTTGATCCCTCC
AAGCCAGCCGTTCAGAAGTTGGGCAAGGCTAAACAAAAGCGCATAAAAAA
AGCTGAACAGGCAAAAGGACAGTCCTTAGGCCCGCGGTGTACAACATGCA
ACGCTTCCTTTCCTTCACGGACCCAGCTTTTTTCACATCTTAAAGAGTCC
GATCACGCACAGGTTCAGGAGGTCACTCGGCATAGAAAGAGAAGAGCTTA
AATGGGCCAATTTCAGTCTTCGACAAGCGAAGAGAACGCCAGCTCTTCCG
CTAGATCATCCGATAAGAAACTTGATTATTACGAACTTTTACAGGTGAAT
TGGGACGCATCTGCAGAGGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_95840ATCC64974_95840Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_95840-T1ATCC64974_95840-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_95840-T1.cdsATCC64974_95840-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_95840-T1.exon2ATCC64974_95840-T1.exon2Aspergillus niger N402exon
ATCC64974_95840-T1.exon1ATCC64974_95840-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR018253
DBxrefInterPro:IPR022755
DBxrefInterPro:IPR036869
DBxrefInterPro:IPR013087
DBxrefInterPro:IPR003604
DBxrefInterPro:IPR001623
DBxrefPFAM:PF12874
DBxrefPFAM:PF12171
DBxrefPFAM:PF00226
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000016.1supercontigOGUI01000016.1:2803430..2805234 -
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