You are here

Home

ATCC64974_95860-T1, ATCC64974_95860-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_95860-T1
Unique NameATCC64974_95860-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:946..2117-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_95860-T1 ID=ATCC64974_95860-T1|Name=ATCC64974_95860-T1|organism=Aspergillus niger N402|type=mRNA|length=1172bp|location=Sequence derived from alignment at OGUI01000017.1:946..2117- (Aspergillus niger N402)
ATGCATTTCGGAGAGGAGCGTGATCCGATCAACTTGCCCTTTCAATTGCC
TTTGATCGCACCTGGTGTAACTGATGCTAATGGTAACAACCCTCTCAATC
TTTGCTCCCTTTTGCAGTCGCCCATGCGACTAAGTGATCTACATAAAGAC
TTACTTGGTATCCGGGAAACTCTTGGCTAGGAATCGATTTCAACACATAC
ACCCACAACGTCGTTCTGCATCCTCTTGAACAGTGTCTAATTCTGAGGTA
TCTGCGTTCCAAGTGCCATTCGGAGAGCCGCCTTCGGAGAGAAGGATACA
TCCTAGGGCCAGTCACAGTAAGGAATAAAGACCTCCCACGGAAGGGATCC
ATTCCCACTTATCAATTTCGCGAAACGCCGTCTGCGGAACAGCATGGACT
CAAGAGACATGCCATCGCACTCGATTGTGAGATGATCGGTGTCAAAGACA
ATCGGCAAACTCTCGCGTTCATAAGTGCCATTGACTTTTTGACAGGCGAA
GTTCTCATTAGCCGCTACGTAGCACCATCCGAGGAGGTCATTGACTGGAG
ATCAAAAATTACCGGAATAACCCAAGATGTTATGACAAGCGCCACGATAT
CTGGCGCTGCATTCAGAGATTGGCGAGAAGCGCGCGAGAATTTATGGCAA
TTTGCCGATTCATCCACTGTTTTCGTCGGCCAATCTCTTAATTATGACCT
TGAGGTTCTGGGAATCTGTCACAACAAAATTGTTGACTCCGCCATTTTGA
CTGCGGAGGCGGTATTCCCAGCCACTGGCCCCACGGAGAGTTTACCTCGC
GCTTGGAGCTTGAAGGCCGTGGCCAAATCTCTTTTGGATTTGGAGATTCA
GAGCGGAGATCGTGCGCACAGTGCTTTGGAAGACACATATGCGGTACGCG
ACGTGATCATATTCTGCATCAGAAATCCGGAACAGTTAAAGTCATGGGCA
GAGCTTCGACAGACAGAAGAGGGACAAAAGGGCAAAAAAAGCCGGCGCAA
GAGCAAGGCCAAACGACATCCGACCACGTCGTCTACTCAAGATATCCAGC
ATAAAACTCGGGTGTTAAAAAATGAGTTTGAATACGATATTGATGACGAT
GACGAATTTTGCTTGTCTGAGTATGCTAGGAATGCTGGCTGGCCAGACGG
GTGGGATCCCTGGTCTGATTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:946..2117-

>ATCC64974_95860-T1 ID=ATCC64974_95860-T1|Name=ATCC64974_95860-T1|organism=Aspergillus niger N402|type=CDS|length=2148bp|location=Sequence derived from alignment at OGUI01000017.1:946..2117- (Aspergillus niger N402)
GAATCGATTTCAACACATACACCCACAACGTCGTTCTGCATCCTCTTGAA
CAGTGTCTAATTCTGAGGTATCTGCGTTCCAAGTGCCATTCGGAGAGCCG
CCTTCGGAGAGAAGGATACATCCTAGGGCCAGTCACAGTAAGGAATAAAG
ACCTCCCACGGAAGGGATCCATTCCCACTTATCAATTTCGCGAAACGCCG
TCTGCGGAACAGCATGGACTCAAGAGACATGCCATCGCACTCGATTGTGA
GATGATCGGTGTCAAAGACAATCGGCAAACTCTCGCGTTCATAAGTGCCA
TTGACTTTTTGACAGGCGAAGTTCTCATTAGCCGCTACGTAGCACCATCC
GAGGAGGTCATTGACTGGAGATCAAAAATTACCGGAATAACCCAAGATGT
TATGACAAGCGCCACGATATCTGGCGCTGCATTCAGAGATTGGCGAGAAG
CGCGCGAGAATTTATGGCAATTTGCCGATTCATCCACTGTTTTCGTCGGC
CAATCTCTTAATTATGACCTTGAGGTTCTGGGAATCTGTCACAACAAAAT
TGTTGACTCCGCCATTTTGACTGCGGAGGCGGTATTCCCAGCCACTGGCC
CCACGGAGAGTTTACCTCGCGCTTGGAGCTTGAAGGCCGTGGCCAAATCT
CTTTTGGATTTGGAGATTCAGAGCGGAGATCGTGCGCACAGTGCTTTGGA
AGACACATATGCGGTACGCGACGTGATCATATTCTGCATCAGAAATCCGG
AACAGTTAAAGTCATGGGCAGAGCTTCGACAGACAGAAGAGGGACAAAAG
GGCAAAAAAAGCCGGCGCAAGAGCAAGGCCAAACGACATCCGACCACGTC
GTCTACTCAAGATATCCAGCATAAAACTCGGGTGTTAAAAAATGAGTTTG
AATACGATATTGATGACGATGACGAATTTTGCTTGTCTGAGTATGCTAGG
AATGCTGGCTGGCCAGACGGGTGGGATCCCTGGTCTGATTGAATGCATTT
CGGAGAGGAGCGTGATCCGATCAACTTGCCCTTTCAATTGCCTTTGATCG
CACCTGGTGTAACTGATGCTAATGGAATCGATTTCAACACATACACCCAC
AACGTCGTTCTGCATCCTCTTGAACAGTGTCTAATTCTGAGGTATCTGCG
TTCCAAGTGCCATTCGGAGAGCCGCCTTCGGAGAGAAGGATACATCCTAG
GGCCAGTCACAGTAAGGAATAAAGACCTCCCACGGAAGGGATCCATTCCC
ACTTATCAATTTCGCGAAACGCCGTCTGCGGAACAGCATGGACTCAAGAG
ACATGCCATCGCACTCGATTGTGAGATGATCGGTGTCAAAGACAATCGGC
AAACTCTCGCGTTCATAAGTGCCATTGACTTTTTGACAGGCGAAGTTCTC
ATTAGCCGCTACGTAGCACCATCCGAGGAGGTCATTGACTGGAGATCAAA
AATTACCGGAATAACCCAAGATGTTATGACAAGCGCCACGATATCTGGCG
CTGCATTCAGAGATTGGCGAGAAGCGCGCGAGAATTTATGGCAATTTGCC
GATTCATCCACTGTTTTCGTCGGCCAATCTCTTAATTATGACCTTGAGGT
TCTGGGAATCTGTCACAACAAAATTGTTGACTCCGCCATTTTGACTGCGG
AGGCGGTATTCCCAGCCACTGGCCCCACGGAGAGTTTACCTCGCGCTTGG
AGCTTGAAGGCCGTGGCCAAATCTCTTTTGGATTTGGAGATTCAGAGCGG
AGATCGTGCGCACAGTGCTTTGGAAGACACATATGCGGTACGCGACGTGA
TCATATTCTGCATCAGAAATCCGGAACAGTTAAAGTCATGGGCAGAGCTT
CGACAGACAGAAGAGGGACAAAAGGGCAAAAAAAGCCGGCGCAAGAGCAA
GGCCAAACGACATCCGACCACGTCGTCTACTCAAGATATCCAGCATAAAA
CTCGGGTGTTAAAAAATGAGTTTGAATACGATATTGATGACGATGACGAA
TTTTGCTTGTCTGAGTATGCTAGGAATGCTGGCTGGCCAGACGGGTGGGA
TCCCTGGTCTGATTGAATGCATTTCGGAGAGGAGCGTGATCCGATCAACT
TGCCCTTTCAATTGCCTTTGATCGCACCTGGTGTAACTGATGCTAATG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_95860ATCC64974_95860Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_95860-T1ATCC64974_95860-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_95860-T1.cdsATCC64974_95860-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_95860-T1.exon2ATCC64974_95860-T1.exon2Aspergillus niger N402exon
ATCC64974_95860-T1.exon1ATCC64974_95860-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR036397
DBxrefInterPro:IPR013520
DBxrefPFAM:PF00929
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:946..2117 -
Powered by Drupal