You are here

Home

ATCC64974_96120-T1, ATCC64974_96120-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_96120-T1
Unique NameATCC64974_96120-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:88871..89873-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_96120-T1 ID=ATCC64974_96120-T1|Name=ATCC64974_96120-T1|organism=Aspergillus niger N402|type=mRNA|length=1003bp|location=Sequence derived from alignment at OGUI01000017.1:88871..89873- (Aspergillus niger N402)
ATGCCGCTCCGTTTTGTAGATGTAAGCTCCTTATCCGCTCCAGGACCTCA
GTCCACACAGACAACTTAATTTGAAGGCACTGCAGGCTAATATGTTATAG
GTTGCAGTCACCTACACCGCCGATCAATTTCACGGCATCTATCGCGGCAA
AAAGTACCACGAGAGTGACTTTTCAGATGTTATCAAACGCGCGCAGCAAT
ATGGTTGCGAGAAGATGATTCTCACCACAATGACCATGGCCGGCGCACAT
ATTAACTTGCAACTGGCGAGGCAATATCCTCGTATCTGCACAATGACGTT
AGGCGTACATCCCTACCACGTCGAGGAGATCTACGCTACCGAAGATGGTG
GTGTATCGTATCTCCAAAGCCTTCGAGAACTCGGAACTCGGCTACTTGCC
GAATCTCCTTCGTCAGTGGTGGCATTCGGCGAAATCGGACTGGACTATGA
GCATCTTGACCGCGCCGACAAAGAAACACAACAACGAGCATTCCGCGATC
AACTGAATTTAGCCGTGGACATGCAACTGCCACTCTTCCTTCATGTCCGC
GACTCCTGGGCCGATTTTATAGACATCATTTCACCGTATATGTCCCGCTT
TCCTCGTGGTGGGCTGGTCCATTCCTTCTCAGGATCCAGAGCCGAAATGG
AACAGTTGGTCGGTTTAGGGTTGGATATTAGTGTGAATGGAATCAGCTTC
CGGACAGACGATCAACTGGATATGGTGCGCCATATACCGTTAGACAAGCT
ACAGTTGGAAACGGATGCGCCATGGTGCGAGGTGCTGAGCCAGGATGAGA
AGATCGTGTCGTACTTGGAGAGAGCACGCCCACTACCTCCCTCCCGGAAA
TATCAGAAGTTTATTGCCGGGCAGATGATCAAATCGCGCAACGAACCTTG
TACCATTGAGCGCGTTGCGATGGTCGTCGCTGGCCTTAAGGGGATTCCGG
TCGAAACTGTGGCGGAAGCAGCGTGGAATAACAGTGTGCGTATGTTTGGT
TAG
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:88871..89873-

>ATCC64974_96120-T1 ID=ATCC64974_96120-T1|Name=ATCC64974_96120-T1|organism=Aspergillus niger N402|type=CDS|length=1848bp|location=Sequence derived from alignment at OGUI01000017.1:88871..89873- (Aspergillus niger N402)
GTTGCAGTCACCTACACCGCCGATCAATTTCACGGCATCTATCGCGGCAA
AAAGTACCACGAGAGTGACTTTTCAGATGTTATCAAACGCGCGCAGCAAT
ATGGTTGCGAGAAGATGATTCTCACCACAATGACCATGGCCGGCGCACAT
ATTAACTTGCAACTGGCGAGGCAATATCCTCGTATCTGCACAATGACGTT
AGGCGTACATCCCTACCACGTCGAGGAGATCTACGCTACCGAAGATGGTG
GTGTATCGTATCTCCAAAGCCTTCGAGAACTCGGAACTCGGCTACTTGCC
GAATCTCCTTCGTCAGTGGTGGCATTCGGCGAAATCGGACTGGACTATGA
GCATCTTGACCGCGCCGACAAAGAAACACAACAACGAGCATTCCGCGATC
AACTGAATTTAGCCGTGGACATGCAACTGCCACTCTTCCTTCATGTCCGC
GACTCCTGGGCCGATTTTATAGACATCATTTCACCGTATATGTCCCGCTT
TCCTCGTGGTGGGCTGGTCCATTCCTTCTCAGGATCCAGAGCCGAAATGG
AACAGTTGGTCGGTTTAGGGTTGGATATTAGTGTGAATGGAATCAGCTTC
CGGACAGACGATCAACTGGATATGGTGCGCCATATACCGTTAGACAAGCT
ACAGTTGGAAACGGATGCGCCATGGTGCGAGGTGCTGAGCCAGGATGAGA
AGATCGTGTCGTACTTGGAGAGAGCACGCCCACTACCTCCCTCCCGGAAA
TATCAGAAGTTTATTGCCGGGCAGATGATCAAATCGCGCAACGAACCTTG
TACCATTGAGCGCGTTGCGATGGTCGTCGCTGGCCTTAAGGGGATTCCGG
TCGAAACTGTGGCGGAAGCAGCGTGGAATAACAGTGTGCGTATGTTTGGT
TAGATGCCGCTCCGTTTTGTAGATGTTGCAGTCACCTACACCGCCGATCA
ATTTCACGGCATCTATCGCGGCAAAAAGTACCACGAGAGTGACTTTTCAG
ATGTTATCAAACGCGCGCAGCAATATGGTTGCGAGAAGATGATTCTCACC
ACAATGACCATGGCCGGCGCACATATTAACTTGCAACTGGCGAGGCAATA
TCCTCGTATCTGCACAATGACGTTAGGCGTACATCCCTACCACGTCGAGG
AGATCTACGCTACCGAAGATGGTGGTGTATCGTATCTCCAAAGCCTTCGA
GAACTCGGAACTCGGCTACTTGCCGAATCTCCTTCGTCAGTGGTGGCATT
CGGCGAAATCGGACTGGACTATGAGCATCTTGACCGCGCCGACAAAGAAA
CACAACAACGAGCATTCCGCGATCAACTGAATTTAGCCGTGGACATGCAA
CTGCCACTCTTCCTTCATGTCCGCGACTCCTGGGCCGATTTTATAGACAT
CATTTCACCGTATATGTCCCGCTTTCCTCGTGGTGGGCTGGTCCATTCCT
TCTCAGGATCCAGAGCCGAAATGGAACAGTTGGTCGGTTTAGGGTTGGAT
ATTAGTGTGAATGGAATCAGCTTCCGGACAGACGATCAACTGGATATGGT
GCGCCATATACCGTTAGACAAGCTACAGTTGGAAACGGATGCGCCATGGT
GCGAGGTGCTGAGCCAGGATGAGAAGATCGTGTCGTACTTGGAGAGAGCA
CGCCCACTACCTCCCTCCCGGAAATATCAGAAGTTTATTGCCGGGCAGAT
GATCAAATCGCGCAACGAACCTTGTACCATTGAGCGCGTTGCGATGGTCG
TCGCTGGCCTTAAGGGGATTCCGGTCGAAACTGTGGCGGAAGCAGCGTGG
AATAACAGTGTGCGTATGTTTGGTTAGATGCCGCTCCGTTTTGTAGAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016788hydrolase activity, acting on ester bonds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_96120ATCC64974_96120Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96120-T1ATCC64974_96120-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96120-T1.cdsATCC64974_96120-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96120-T1.exon2ATCC64974_96120-T1.exon2Aspergillus niger N402exon
ATCC64974_96120-T1.exon1ATCC64974_96120-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR032466
DBxrefInterPro:IPR001130
DBxrefPFAM:PF01026
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:88871..89873 -
Powered by Drupal