You are here

Home

ATCC64974_96320-T1, ATCC64974_96320-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_96320-T1
Unique NameATCC64974_96320-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:167998..169155-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_96320-T1 ID=ATCC64974_96320-T1|Name=ATCC64974_96320-T1|organism=Aspergillus niger N402|type=mRNA|length=1158bp|location=Sequence derived from alignment at OGUI01000017.1:167998..169155- (Aspergillus niger N402)
ATGGTCAAGCTACTTCCTACCTTCGTTTTCCAAGCTGGATTTGCTCTCGC
GACAGCGGAGTATCTCAACTGGACCACGTACAGCGCCAACGGGGTAAATT
TGGGCGGGTGGCTCGAGCAAGAAAGCACCATCGATACTACTTGGTGGGCT
AAATATTCCAAGGGTGCGGACGATGAATGGGGCCTTTGTGTGAATCAAGG
CTCCCAGTGTGGTCCTATTCTTGAGCGAAGATATGCGACCTATATCACCA
CCTCAGATATCGATACGTTGGCGAACGCCGGAGTGAACACTTTGCGTATC
CCCACCACATATGCTGCTTGGGTCAAAGTGCCCGGGTCCCAGCTGTACTC
TGGGAACCAGGTATCCTTTCTGAACAACATTGCAACATATGCTATCACTA
GGTATTCCATGCATATCATCATCGATGTACACTCCTTACCAGGTGGAGTG
AACGGTAAGGCGTTCGGGGAGGCAACAGGACATTACGGATGGTTCAACAA
CCAAACGGCGTTGGATTACTCCCTTCAGGCTATCGATTCCGTCATTGCCT
ATATTCAGAACTCCAGCAATCCTGGATCCTATACTATTGAGCCTATCAAC
GAGCCCGTCGACAATAAAGATATGTCAGCATTCGGGAGTCCAGAAGCATT
ATCCGATGAAGGCGCAGCTTGGGTTTTGAAGTACATTCAGGCAGTACTGG
ACAAGGTTGAGGTGATCAGCCCGGATATACCGGTCATGTTCCAAGGCAGT
TTCCGAGGCGAGGAGTACTGGTCACCCAACTTCTCTACATCCGCTAACCT
GGTATTCGATGTGCACAACTATTATTTTGCCGGACGAGGAGCAACCGGTA
AGAATATTACGACCTACATCTGTGCCGATGCAAAGAATGGAGCCGGTGAT
GGCAAATTTCCCGTATTTGTCGGCGAATGGTCGATCCAGGCACAGTACAA
TAACTCCTTTGCTGACAGAGATGAAGCTCTCAACACCGGGCTCTATGCTT
CTGCGAAAGATTCCCAGGGGAGTGCCTATTGGAATGCCAAGTTTTCGGGG
AATGCAACCGTCGACGGCCAAGGTACACAGGCTGACTACTGGAATTACAT
GACCTGGATTGACAATGACATGATCCATCCGGACGAAGCTTCTGGGGTGT
GTGCATAG
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:167998..169155-

>ATCC64974_96320-T1 ID=ATCC64974_96320-T1|Name=ATCC64974_96320-T1|organism=Aspergillus niger N402|type=CDS|length=1158bp|location=Sequence derived from alignment at OGUI01000017.1:167998..169155- (Aspergillus niger N402)
ATGGTCAAGCTACTTCCTACCTTCGTTTTCCAAGCTGGATTTGCTCTCGC
GACAGCGGAGTATCTCAACTGGACCACGTACAGCGCCAACGGGGTAAATT
TGGGCGGGTGGCTCGAGCAAGAAAGCACCATCGATACTACTTGGTGGGCT
AAATATTCCAAGGGTGCGGACGATGAATGGGGCCTTTGTGTGAATCAAGG
CTCCCAGTGTGGTCCTATTCTTGAGCGAAGATATGCGACCTATATCACCA
CCTCAGATATCGATACGTTGGCGAACGCCGGAGTGAACACTTTGCGTATC
CCCACCACATATGCTGCTTGGGTCAAAGTGCCCGGGTCCCAGCTGTACTC
TGGGAACCAGGTATCCTTTCTGAACAACATTGCAACATATGCTATCACTA
GGTATTCCATGCATATCATCATCGATGTACACTCCTTACCAGGTGGAGTG
AACGGTAAGGCGTTCGGGGAGGCAACAGGACATTACGGATGGTTCAACAA
CCAAACGGCGTTGGATTACTCCCTTCAGGCTATCGATTCCGTCATTGCCT
ATATTCAGAACTCCAGCAATCCTGGATCCTATACTATTGAGCCTATCAAC
GAGCCCGTCGACAATAAAGATATGTCAGCATTCGGGAGTCCAGAAGCATT
ATCCGATGAAGGCGCAGCTTGGGTTTTGAAGTACATTCAGGCAGTACTGG
ACAAGGTTGAGGTGATCAGCCCGGATATACCGGTCATGTTCCAAGGCAGT
TTCCGAGGCGAGGAGTACTGGTCACCCAACTTCTCTACATCCGCTAACCT
GGTATTCGATGTGCACAACTATTATTTTGCCGGACGAGGAGCAACCGGTA
AGAATATTACGACCTACATCTGTGCCGATGCAAAGAATGGAGCCGGTGAT
GGCAAATTTCCCGTATTTGTCGGCGAATGGTCGATCCAGGCACAGTACAA
TAACTCCTTTGCTGACAGAGATGAAGCTCTCAACACCGGGCTCTATGCTT
CTGCGAAAGATTCCCAGGGGAGTGCCTATTGGAATGCCAAGTTTTCGGGG
AATGCAACCGTCGACGGCCAAGGTACACAGGCTGACTACTGGAATTACAT
GACCTGGATTGACAATGACATGATCCATCCGGACGAAGCTTCTGGGGTGT
GTGCATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_96320ATCC64974_96320Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96320-T1.cdsATCC64974_96320-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96320-T1.exon1ATCC64974_96320-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96320-T1ATCC64974_96320-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH5_14
NoteCAZy:GH5_15
NoteCAZy:GH5_44
NoteCAZy:GH5_9
NoteCAZy:GH5_23
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR001547
DBxrefPFAM:PF00150
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:167998..169155 -
Powered by Drupal