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ATCC64974_96330-T1, ATCC64974_96330-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_96330-T1
Unique NameATCC64974_96330-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:171108..172667-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_96330-T1 ID=ATCC64974_96330-T1|Name=ATCC64974_96330-T1|organism=Aspergillus niger N402|type=mRNA|length=1560bp|location=Sequence derived from alignment at OGUI01000017.1:171108..172667- (Aspergillus niger N402)
ATGGATCTTACCACCCCCGTGGCCTGTCTAGGCTGCCGAGAAAAACATCT
CAAATGCGACGGCAATCTGGCTGGCTGTGCTCGCTGCCAGTCCTTGGGGC
TCACCTGCCGCTTCGTCCCCTCCCGTCGTGGTCGTAAGTGTCGCCCAGCA
GCAGCAGCAGTTCCCCACGACACCGCCAGCCTGCCCACCCTTAACTCTAA
TTCACTACCGCTGGATCCCATCTCTTTCTCGACAGGTCCTTTCGGGCAGT
CCCACAGCCTGGAATACCCACAGCATGCGGGCTCCATGGATTGCGATCAA
GGGCTGCAGCTGATCTCTCTGTATTATCTCCACTTTCACCAAGCCCATCC
GTTCCTGGCCCCCATGCAACTTCTGCTCGAGTCGGAGCCGCCCGCGTTCC
TGCTAGACATTATAGAGTTTATCAGCCTTCATTACTTGTCCCCGCAGCTG
TTTCAGGATAGCAGCGAGTCTCTCGGTCTGGCCGTGCAGGCTGCGGAACT
GACCATCGAAAAGGTGCAGGCCTTCCTGCTCCTCACCATTGTACATCACG
GGCGACAGCAGGCCCATGAGGCCCGCTCATGTCTGGGACAGGCCCTGCAG
GGTGCACTGGACCTGGGCTTGCACCGTCGGGAGACCTCGGACGCCATCCG
TGTGGATGCTCCCTTTCAGGCTGAGAGTCTGCGGCGCACCTGGTGGGAGA
TCGTCGTGATCGATGTGCTGCTGGCGGCTGTCCAGGTCGATGGGGTTTTG
CAGTTCCACATGGAAGAAACACCCACCACGCCTCTTCCCGGTGATCCCAG
TCAGTATCAGGCGAGCGACGTCATCTCCGACCCCAACCCTTTCCCGTCCA
CTTTGGCGGATTTGGAACAAAACGGTCTGTTCTGCGGTGATGTGGAATTC
TCCCCGGGCGCTTACCGCGTCGAGGCTGCTTTGCTGCTTCGCAATTGCCT
CCGAGCCGGTCAGACGCACGTCAGTGAGGAGGCACTAAACATATTGAACG
CGGCCAACATCGCCTGGTTCCATCGACTGCCACCACGCCGACGGTGCATG
CTTCACCTCAACGGCGTGCAGGATGAGCTGATGACACAGGCGATGATGTT
AATGCACTGCGCCACCATCTATTTGCACTTCCCACGCTCCTGTCTGCTCG
CATTCCTGCCCGTCACAGGCCAGATCATGTGCTCATCCCCGGCCTTGTTT
GTCACCACGACCCTGGACCCGCAAGTGCACACCCACAGGGTTATTGAGGG
GTCTGTCAGACTATCTCAGCTAGCTGCCTTGTCCACCTCTGTCGTTAATC
ATACTCCTTTCTTTGCCTGCACCCTGGTCCTCAGTTCCGTCATCCAAGTT
GCCGCTATGTTCAGCGAGAGCCTGCATTCCTCTGGGACGAGCCAGCGACA
ATACCTGGCTCTCAACCTTGGTGTTCTCAAGTCCATGGGACAAACCTGGC
CCATTGCTGCTGCTGCTACGCAACGAGTGCGTCAAGCCATGATCGAGGTC
CACAACGCGATCCCACGAGATGTTAATGCGTTGCTTGAGGAAGTTAGCCC
TCCTGCTTGA
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Coding sequence (CDS) from alignment at OGUI01000017.1:171108..172667-

>ATCC64974_96330-T1 ID=ATCC64974_96330-T1|Name=ATCC64974_96330-T1|organism=Aspergillus niger N402|type=CDS|length=1560bp|location=Sequence derived from alignment at OGUI01000017.1:171108..172667- (Aspergillus niger N402)
ATGGATCTTACCACCCCCGTGGCCTGTCTAGGCTGCCGAGAAAAACATCT
CAAATGCGACGGCAATCTGGCTGGCTGTGCTCGCTGCCAGTCCTTGGGGC
TCACCTGCCGCTTCGTCCCCTCCCGTCGTGGTCGTAAGTGTCGCCCAGCA
GCAGCAGCAGTTCCCCACGACACCGCCAGCCTGCCCACCCTTAACTCTAA
TTCACTACCGCTGGATCCCATCTCTTTCTCGACAGGTCCTTTCGGGCAGT
CCCACAGCCTGGAATACCCACAGCATGCGGGCTCCATGGATTGCGATCAA
GGGCTGCAGCTGATCTCTCTGTATTATCTCCACTTTCACCAAGCCCATCC
GTTCCTGGCCCCCATGCAACTTCTGCTCGAGTCGGAGCCGCCCGCGTTCC
TGCTAGACATTATAGAGTTTATCAGCCTTCATTACTTGTCCCCGCAGCTG
TTTCAGGATAGCAGCGAGTCTCTCGGTCTGGCCGTGCAGGCTGCGGAACT
GACCATCGAAAAGGTGCAGGCCTTCCTGCTCCTCACCATTGTACATCACG
GGCGACAGCAGGCCCATGAGGCCCGCTCATGTCTGGGACAGGCCCTGCAG
GGTGCACTGGACCTGGGCTTGCACCGTCGGGAGACCTCGGACGCCATCCG
TGTGGATGCTCCCTTTCAGGCTGAGAGTCTGCGGCGCACCTGGTGGGAGA
TCGTCGTGATCGATGTGCTGCTGGCGGCTGTCCAGGTCGATGGGGTTTTG
CAGTTCCACATGGAAGAAACACCCACCACGCCTCTTCCCGGTGATCCCAG
TCAGTATCAGGCGAGCGACGTCATCTCCGACCCCAACCCTTTCCCGTCCA
CTTTGGCGGATTTGGAACAAAACGGTCTGTTCTGCGGTGATGTGGAATTC
TCCCCGGGCGCTTACCGCGTCGAGGCTGCTTTGCTGCTTCGCAATTGCCT
CCGAGCCGGTCAGACGCACGTCAGTGAGGAGGCACTAAACATATTGAACG
CGGCCAACATCGCCTGGTTCCATCGACTGCCACCACGCCGACGGTGCATG
CTTCACCTCAACGGCGTGCAGGATGAGCTGATGACACAGGCGATGATGTT
AATGCACTGCGCCACCATCTATTTGCACTTCCCACGCTCCTGTCTGCTCG
CATTCCTGCCCGTCACAGGCCAGATCATGTGCTCATCCCCGGCCTTGTTT
GTCACCACGACCCTGGACCCGCAAGTGCACACCCACAGGGTTATTGAGGG
GTCTGTCAGACTATCTCAGCTAGCTGCCTTGTCCACCTCTGTCGTTAATC
ATACTCCTTTCTTTGCCTGCACCCTGGTCCTCAGTTCCGTCATCCAAGTT
GCCGCTATGTTCAGCGAGAGCCTGCATTCCTCTGGGACGAGCCAGCGACA
ATACCTGGCTCTCAACCTTGGTGTTCTCAAGTCCATGGGACAAACCTGGC
CCATTGCTGCTGCTGCTACGCAACGAGTGCGTCAAGCCATGATCGAGGTC
CACAACGCGATCCCACGAGATGTTAATGCGTTGCTTGAGGAAGTTAGCCC
TCCTGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_96330ATCC64974_96330Aspergillus niger N402gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96330-T1.cdsATCC64974_96330-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96330-T1.exon1ATCC64974_96330-T1.exon1Aspergillus niger N402exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96330-T1ATCC64974_96330-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:171108..172667 -
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