You are here

Home

ATCC64974_96410-T1, ATCC64974_96410-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_96410-T1
Unique NameATCC64974_96410-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:188129..189026+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_96410-T1 ID=ATCC64974_96410-T1|Name=ATCC64974_96410-T1|organism=Aspergillus niger N402|type=mRNA|length=898bp|location=Sequence derived from alignment at OGUI01000017.1:188129..189026+ (Aspergillus niger N402)
ATGTCCCAATCTGATTCCTTTCTCAGCCTTCAAGGCAAAGTAGCCCTCAT
TACCGGATCTGGTAAAACGAGAGGCATTGGTGCCGCAATTGCCACTCTCC
TGGCCCACCACGGTGCAGCGGTTATCCTCAACTATGTCTCACCGTCCACA
GGCCCTTCCGCTGCCACCGTGGCGCAGAGCATCACCGCGGCGGGCGGACA
GGCCCTGGCCGTACAGGCGGACATCTCCCGACCTGACGAAGCACAGAAGC
TTGTGCAAGCAGCAGTCAATGCCTTTGGAAGGCTTGATATCCTAGGTTTG
TCCACGAACACCTCCGCCTCCCTGGCTTGGACGCTTGCTGACGAGGACCA
GTCAACAACGCGGCCACTGGCACTCCAGGACCGGTACTCAGCGCTGCGCC
TGAAGCTCTTGCGACCACCTTTGCTGTCAATGTCTTTGGTCCAATCTACC
TCATGCAGGAAGCAGTGAAGCACATGCCGCCACGCAGTCGAGTCATCAAC
ATCGGATCGGTGGCGTCCAAGTTGGGAATTTCAGGATCCCCAGTCTATAG
CGCCTCAAAGGCGGCGATGGATGCGCTGACGTTTTCCATGGCAATGGAGG
TAAGCTGGGCTCTAATGTGGGAACCCGCACGGGACGTGTGCTAATTGGTG
TCTAGCTTGGTCGCAATCATGGCGGCATAACCATCAACACAGTTTCCCCC
GGTCCGGTAGATACAGATGGTCTACCGCCTCAGGTGGCGGAAAAGATCAA
CAAGACAATGGTTCCCATGAGCCGAGTCGAGGAGCGATTGGGAACCGTGC
AGGATATCGCGGACGCAGTGCTGTTGTTGTGCTCGGAGAAGAGTCGCTGG
ATCTCCGGACAGGTCATTTCCGTCAGTGGTGGAATTGTGGGTGGCTAG
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:188129..189026+

>ATCC64974_96410-T1 ID=ATCC64974_96410-T1|Name=ATCC64974_96410-T1|organism=Aspergillus niger N402|type=CDS|length=2358bp|location=Sequence derived from alignment at OGUI01000017.1:188129..189026+ (Aspergillus niger N402)
ATGTCCCAATCTGATTCCTTTCTCAGCCTTCAAGGCAAAGTAGCCCTCAT
TACCGGATCTGGTAAAACGAGAGGCATTGGTGCCGCAATTGCCACTCTCC
TGGCCCACCACGGTGCAGCGGTTATCCTCAACTATGTCTCACCGTCCACA
GGCCCTTCCGCTGCCACCGTGGCGCAGAGCATCACCGCGGCGGGCGGACA
GGCCCTGGCCGTACAGGCGGACATCTCCCGACCTGACGAAGCACAGAAGC
TTGTGCAAGCAGCAGTCAATGCCTTTGGAAGGCTTGATATCCTAGTCAAC
AACGCGGCCACTGGCACTCCAGGACCGGTACTCAGCGCTGCGCCTGAAGC
TCTTGCGACCACCTTTGCTGTCAATGTCTTTGGTCCAATCTACCTCATGC
AGGAAGCAGTGAAGCACATGCCGCCACGCAGTCGAGTCATCAACATCGGA
TCGGTGGCGTCCAAGTTGGGAATTTCAGGATCCCCAGTCTATAGCGCCTC
AAAGGCGGCGATGGATGCGCTGACGTTTTCCATGGCAATGGAGCTTGGTC
GCAATCATGGCGGCATAACCATCAACACAGTTTCCCCCGGTCCGGTAGAT
ACAGATGGTCTACCGCCTCAGGTGGCGGAAAAGATCAACAAGACAATGGT
TCCCATGAGCCGAGTCGAGGAGCGATTGGGAACCGTGCAGGATATCGCGG
ACGCAGTGCTGTTGTTGTGCTCGGAGAAGAGTCGCTGGATCTCCGGACAG
GTCATTTCCGTCAGTGGTGGAATTGTGGGTGGCTAGATGTCCCAATCTGA
TTCCTTTCTCAGCCTTCAAGGCAAAGTAGCCCTCATTACCGGATCTGGTA
AAACGAGAGGCATTGGTGCCGCAATTGCCACTCTCCTGGCCCACCACGGT
GCAGCGGTTATCCTCAACTATGTCTCACCGTCCACAGGCCCTTCCGCTGC
CACCGTGGCGCAGAGCATCACCGCGGCGGGCGGACAGGCCCTGGCCGTAC
AGGCGGACATCTCCCGACCTGACGAAGCACAGAAGCTTGTGCAAGCAGCA
GTCAATGCCTTTGGAAGGCTTGATATCCTAGTCAACAACGCGGCCACTGG
CACTCCAGGACCGGTACTCAGCGCTGCGCCTGAAGCTCTTGCGACCACCT
TTGCTGTCAATGTCTTTGGTCCAATCTACCTCATGCAGGAAGCAGTGAAG
CACATGCCGCCACGCAGTCGAGTCATCAACATCGGATCGGTGGCGTCCAA
GTTGGGAATTTCAGGATCCCCAGTCTATAGCGCCTCAAAGGCGGCGATGG
ATGCGCTGACGTTTTCCATGGCAATGGAGCTTGGTCGCAATCATGGCGGC
ATAACCATCAACACAGTTTCCCCCGGTCCGGTAGATACAGATGGTCTACC
GCCTCAGGTGGCGGAAAAGATCAACAAGACAATGGTTCCCATGAGCCGAG
TCGAGGAGCGATTGGGAACCGTGCAGGATATCGCGGACGCAGTGCTGTTG
TTGTGCTCGGAGAAGAGTCGCTGGATCTCCGGACAGGTCATTTCCGTCAG
TGGTGGAATTGTGGGTGGCTAGATGTCCCAATCTGATTCCTTTCTCAGCC
TTCAAGGCAAAGTAGCCCTCATTACCGGATCTGGTAAAACGAGAGGCATT
GGTGCCGCAATTGCCACTCTCCTGGCCCACCACGGTGCAGCGGTTATCCT
CAACTATGTCTCACCGTCCACAGGCCCTTCCGCTGCCACCGTGGCGCAGA
GCATCACCGCGGCGGGCGGACAGGCCCTGGCCGTACAGGCGGACATCTCC
CGACCTGACGAAGCACAGAAGCTTGTGCAAGCAGCAGTCAATGCCTTTGG
AAGGCTTGATATCCTAGTCAACAACGCGGCCACTGGCACTCCAGGACCGG
TACTCAGCGCTGCGCCTGAAGCTCTTGCGACCACCTTTGCTGTCAATGTC
TTTGGTCCAATCTACCTCATGCAGGAAGCAGTGAAGCACATGCCGCCACG
CAGTCGAGTCATCAACATCGGATCGGTGGCGTCCAAGTTGGGAATTTCAG
GATCCCCAGTCTATAGCGCCTCAAAGGCGGCGATGGATGCGCTGACGTTT
TCCATGGCAATGGAGCTTGGTCGCAATCATGGCGGCATAACCATCAACAC
AGTTTCCCCCGGTCCGGTAGATACAGATGGTCTACCGCCTCAGGTGGCGG
AAAAGATCAACAAGACAATGGTTCCCATGAGCCGAGTCGAGGAGCGATTG
GGAACCGTGCAGGATATCGCGGACGCAGTGCTGTTGTTGTGCTCGGAGAA
GAGTCGCTGGATCTCCGGACAGGTCATTTCCGTCAGTGGTGGAATTGTGG
GTGGCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_96410ATCC64974_96410Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96410-T1.exon1ATCC64974_96410-T1.exon1Aspergillus niger N402exon
ATCC64974_96410-T1.exon2ATCC64974_96410-T1.exon2Aspergillus niger N402exon
ATCC64974_96410-T1.exon3ATCC64974_96410-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96410-T1.cdsATCC64974_96410-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96410-T1ATCC64974_96410-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:188129..189026 +
Powered by Drupal