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ATCC64974_96540-T1, ATCC64974_96540-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_96540-T1
Unique NameATCC64974_96540-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:224812..226349+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_96540-T1 ID=ATCC64974_96540-T1|Name=ATCC64974_96540-T1|organism=Aspergillus niger N402|type=mRNA|length=1538bp|location=Sequence derived from alignment at OGUI01000017.1:224812..226349+ (Aspergillus niger N402)
ATGACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGC
TGTGATCCAGGCCATCGTCGACTATGTCTACGACTACCAGATCGCCACCG
ATAATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCT
GCCCTCGAGAGTATCCATACCAGTCCCCAATGCGCACAGCTCGTTGGACC
GGCGTTCCCCATCGCCCCAGCCACCTCGGGTTTGTTCCGGTTACCGGGAA
CAGCCTACCAGCTGGATATCCTCAAGGGAGCCTTTGATCTGGGGGCCATG
ATCCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCA
TCCCTCGGGTGAGCTACAGACCACTTTAGCGACTGTCAAGTCACATACAC
TAACAATATTAATTTAGATAACCTTGGTGCCATTCTGGCCGTCGCAGATG
TCCGCAGCCGTGTAGCCCTGGCAGAGGGCGACCCCGACAGCATCGTGACA
ATGCAGCAGGTTCTGGAGGCCTTGATCAAGGCGTATGAGATTCAGGGCTG
CTTCCAGATCAAGAATGCCTTCAACAAAGTCGGGTTAGACCACACCATCC
TGGTCAAGATTGGCGCGACCGCCGTGTCGGCCTGGCTGCTAGATCTTCCT
CGCGAGCAAGCCCTTAGTGCTGTATCCCACGCCTGGATGGACGGTCACCC
ACTGCGCGTGTACCGCCAGGCACCCAACACCGGTCCGCGCAAGGGATGGG
CAGCGGGTGATGCTTGCATGCGGGCTGTGCATCTCGCACTACTAGCCAAG
GCCGGACAACCAGGTGCCAACACGGTGCTGACCACGCCCCGCTGGGGTTT
CTACGATGTACTATTCAAGGGCCAGGAATTCGATCTCCCCCAGCCATTTG
GCACCTGGGTCATTGAAACCGTGCTGTTTAAGGTGAACACGGCCGAGGGC
CATGGAATGACGGCAGTGGAAGCCGCGCTGGAGATCGCCAATACCCTGCG
GGCGCGTGGACTTGACCCAGCCAAGGATATCCAGTCAATCCACGCCAAGA
CCCAGGCTGCTGGTATGACGATCATCAACAAGGGCGGAGCAACTTTGCAT
AACGCCGCAGATCGTGACCACTGTCTGCGGTACATGGTCGCTGTAGTGCT
GCTGAAGGGAGCGCAGGTCGAGACGGCCGACTACCAGGACGACAGCCCCT
GGGCGACGGACCCGCGCGTCGATGCCCTGCGCCAGAAGATCACCATGGCA
GAGGACCCCAAATACACAGCCGATTATCATGATATGGCGGTGCGCAGTGT
GGCGAATTCGCTCACTGTCACCCTGACGGACGGCACGACGCTGCCTGAAG
TGTTGGTAGAATATCCACTGGGACATGTCCGACGCCCGGAGACGCCGCAG
GAAGTTTACGCAAAAGCAGAGCGGAATCTGGGTCTTCGATTGTCGACAGA
TAGAGTCCAGCAGATCCTGAAGACGGTGGCATCGGAGGAGTTTATGTCGC
TACCAGCATGCCATTTTGTGAACCTGTTCAGTTTGTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:224812..226349+

>ATCC64974_96540-T1 ID=ATCC64974_96540-T1|Name=ATCC64974_96540-T1|organism=Aspergillus niger N402|type=CDS|length=2958bp|location=Sequence derived from alignment at OGUI01000017.1:224812..226349+ (Aspergillus niger N402)
ATGACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGC
TGTGATCCAGGCCATCGTCGACTATGTCTACGACTACCAGATCGCCACCG
ATAATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCT
GCCCTCGAGAGTATCCATACCAGTCCCCAATGCGCACAGCTCGTTGGACC
GGCGTTCCCCATCGCCCCAGCCACCTCGGGTTTGTTCCGGTTACCGGGAA
CAGCCTACCAGCTGGATATCCTCAAGGGAGCCTTTGATCTGGGGGCCATG
ATCCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCA
TCCCTCGGATAACCTTGGTGCCATTCTGGCCGTCGCAGATGTCCGCAGCC
GTGTAGCCCTGGCAGAGGGCGACCCCGACAGCATCGTGACAATGCAGCAG
GTTCTGGAGGCCTTGATCAAGGCGTATGAGATTCAGGGCTGCTTCCAGAT
CAAGAATGCCTTCAACAAAGTCGGGTTAGACCACACCATCCTGGTCAAGA
TTGGCGCGACCGCCGTGTCGGCCTGGCTGCTAGATCTTCCTCGCGAGCAA
GCCCTTAGTGCTGTATCCCACGCCTGGATGGACGGTCACCCACTGCGCGT
GTACCGCCAGGCACCCAACACCGGTCCGCGCAAGGGATGGGCAGCGGGTG
ATGCTTGCATGCGGGCTGTGCATCTCGCACTACTAGCCAAGGCCGGACAA
CCAGGTGCCAACACGGTGCTGACCACGCCCCGCTGGGGTTTCTACGATGT
ACTATTCAAGGGCCAGGAATTCGATCTCCCCCAGCCATTTGGCACCTGGG
TCATTGAAACCGTGCTGTTTAAGGTGAACACGGCCGAGGGCCATGGAATG
ACGGCAGTGGAAGCCGCGCTGGAGATCGCCAATACCCTGCGGGCGCGTGG
ACTTGACCCAGCCAAGGATATCCAGTCAATCCACGCCAAGACCCAGGCTG
CTGGTATGACGATCATCAACAAGGGCGGAGCAACTTTGCATAACGCCGCA
GATCGTGACCACTGTCTGCGGTACATGGTCGCTGTAGTGCTGCTGAAGGG
AGCGCAGGTCGAGACGGCCGACTACCAGGACGACAGCCCCTGGGCGACGG
ACCCGCGCGTCGATGCCCTGCGCCAGAAGATCACCATGGCAGAGGACCCC
AAATACACAGCCGATTATCATGATATGGCGGTGCGCAGTGTGGCGAATTC
GCTCACTGTCACCCTGACGGACGGCACGACGCTGCCTGAAGTGTTGGTAG
AATATCCACTGGGACATGTCCGACGCCCGGAGACGCCGCAGGAAGTTTAC
GCAAAAGCAGAGCGGAATCTGGGTCTTCGATTGTCGACAGATAGAGTCCA
GCAGATCCTGAAGACGGTGGCATCGGAGGAGTTTATGTCGCTACCAGCAT
GCCATTTTGTGAACCTGTTCAGTTTGTAAATGACTGTCATTCCTGCCGCC
GACGACAACTCGCGCAAGCCCTACGATGCTGTGATCCAGGCCATCGTCGA
CTATGTCTACGACTACCAGATCGCCACCGATAATGCCTGGGCGCGGGCCA
AGGTCGCCTTGATGGATGCTCTTGGAGCTGCCCTCGAGAGTATCCATACC
AGTCCCCAATGCGCACAGCTCGTTGGACCGGCGTTCCCCATCGCCCCAGC
CACCTCGGGTTTGTTCCGGTTACCGGGAACAGCCTACCAGCTGGATATCC
TCAAGGGAGCCTTTGATCTGGGGGCCATGATCCGCTACCTCGACCACAAT
GATGCCTTTCCCGGTGCAGAATGGGGGCATCCCTCGGATAACCTTGGTGC
CATTCTGGCCGTCGCAGATGTCCGCAGCCGTGTAGCCCTGGCAGAGGGCG
ACCCCGACAGCATCGTGACAATGCAGCAGGTTCTGGAGGCCTTGATCAAG
GCGTATGAGATTCAGGGCTGCTTCCAGATCAAGAATGCCTTCAACAAAGT
CGGGTTAGACCACACCATCCTGGTCAAGATTGGCGCGACCGCCGTGTCGG
CCTGGCTGCTAGATCTTCCTCGCGAGCAAGCCCTTAGTGCTGTATCCCAC
GCCTGGATGGACGGTCACCCACTGCGCGTGTACCGCCAGGCACCCAACAC
CGGTCCGCGCAAGGGATGGGCAGCGGGTGATGCTTGCATGCGGGCTGTGC
ATCTCGCACTACTAGCCAAGGCCGGACAACCAGGTGCCAACACGGTGCTG
ACCACGCCCCGCTGGGGTTTCTACGATGTACTATTCAAGGGCCAGGAATT
CGATCTCCCCCAGCCATTTGGCACCTGGGTCATTGAAACCGTGCTGTTTA
AGGTGAACACGGCCGAGGGCCATGGAATGACGGCAGTGGAAGCCGCGCTG
GAGATCGCCAATACCCTGCGGGCGCGTGGACTTGACCCAGCCAAGGATAT
CCAGTCAATCCACGCCAAGACCCAGGCTGCTGGTATGACGATCATCAACA
AGGGCGGAGCAACTTTGCATAACGCCGCAGATCGTGACCACTGTCTGCGG
TACATGGTCGCTGTAGTGCTGCTGAAGGGAGCGCAGGTCGAGACGGCCGA
CTACCAGGACGACAGCCCCTGGGCGACGGACCCGCGCGTCGATGCCCTGC
GCCAGAAGATCACCATGGCAGAGGACCCCAAATACACAGCCGATTATCAT
GATATGGCGGTGCGCAGTGTGGCGAATTCGCTCACTGTCACCCTGACGGA
CGGCACGACGCTGCCTGAAGTGTTGGTAGAATATCCACTGGGACATGTCC
GACGCCCGGAGACGCCGCAGGAAGTTTACGCAAAAGCAGAGCGGAATCTG
GGTCTTCGATTGTCGACAGATAGAGTCCAGCAGATCCTGAAGACGGTGGC
ATCGGAGGAGTTTATGTCGCTACCAGCATGCCATTTTGTGAACCTGTTCA
GTTTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019629propionate catabolic process, 2-methylcitrate cycle
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
GO:00475472-methylcitrate dehydratase activity
GO:00515372 iron, 2 sulfur cluster binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_96540ATCC64974_96540Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96540-T1.exon1ATCC64974_96540-T1.exon1Aspergillus niger N402exon
ATCC64974_96540-T1.exon2ATCC64974_96540-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96540-T1.cdsATCC64974_96540-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96540-T1ATCC64974_96540-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036148
DBxrefInterPro:IPR042188
DBxrefInterPro:IPR042183
DBxrefInterPro:IPR005656
DBxrefInterPro:IPR012705
DBxrefPFAM:PF03972
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:224812..226349 +
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