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ATCC64974_96620-T1, ATCC64974_96620-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_96620-T1
Unique NameATCC64974_96620-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:252917..253328+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_96620-T1 ID=ATCC64974_96620-T1|Name=ATCC64974_96620-T1|organism=Aspergillus niger N402|type=mRNA|length=412bp|location=Sequence derived from alignment at OGUI01000017.1:252917..253328+ (Aspergillus niger N402)
ATGGAGGTCGGTATCGGCACCCGTGGAAACAGCAAAAGACCGGCTGTGAG
TTGGACTCTCATCGTCTCATCCCTTAGCATGCCTTACCTCATTGACCATT
GCCGATTCATTTGATCGATTTGTTGATGATGGTGTTCTGTGTGACCAGTG
CCGGAGTCGCAAGGTGAGACACTCGTCTTAACCCCATGAACCTTAGGTGC
ATTTGCATTCTAACCGAATTTCACTCTCGTAGACTAAATGCAACCGTGTC
TCTTCCTGCTCCACCTGCATCGCTGCCAATCTAACATGTCGCATTACCCG
CCAGGCCCAAATCACGGCCGACAGCGACTCCAGTATGCCCAATGTTGATA
ATCCCAATCTAAGAGAGTTGGAGGAGGACACTACTATTCTTGGCTCATTT
TGCTGGATCTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:252917..253328+

>ATCC64974_96620-T1 ID=ATCC64974_96620-T1|Name=ATCC64974_96620-T1|organism=Aspergillus niger N402|type=CDS|length=720bp|location=Sequence derived from alignment at OGUI01000017.1:252917..253328+ (Aspergillus niger N402)
ATGGAGGTCGGTATCGGCACCCGTGGAAACAGCAAAAGACCGGCTTGCCG
GAGTCGCAAGACTAAATGCAACCGTGTCTCTTCCTGCTCCACCTGCATCG
CTGCCAATCTAACATGTCGCATTACCCGCCAGGCCCAAATCACGGCCGAC
AGCGACTCCAGTATGCCCAATGTTGATAATCCCAATCTAAGAGAGTTGGA
GGAGGACACTACTATTCTTGGCTCATTTTGCTGGATCTAAATGGAGGTCG
GTATCGGCACCCGTGGAAACAGCAAAAGACCGGCTTGCCGGAGTCGCAAG
ACTAAATGCAACCGTGTCTCTTCCTGCTCCACCTGCATCGCTGCCAATCT
AACATGTCGCATTACCCGCCAGGCCCAAATCACGGCCGACAGCGACTCCA
GTATGCCCAATGTTGATAATCCCAATCTAAGAGAGTTGGAGGAGGACACT
ACTATTCTTGGCTCATTTTGCTGGATCTAAATGGAGGTCGGTATCGGCAC
CCGTGGAAACAGCAAAAGACCGGCTTGCCGGAGTCGCAAGACTAAATGCA
ACCGTGTCTCTTCCTGCTCCACCTGCATCGCTGCCAATCTAACATGTCGC
ATTACCCGCCAGGCCCAAATCACGGCCGACAGCGACTCCAGTATGCCCAA
TGTTGATAATCCCAATCTAAGAGAGTTGGAGGAGGACACTACTATTCTTG
GCTCATTTTGCTGGATCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_96620ATCC64974_96620Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96620-T1.exon1ATCC64974_96620-T1.exon1Aspergillus niger N402exon
ATCC64974_96620-T1.exon2ATCC64974_96620-T1.exon2Aspergillus niger N402exon
ATCC64974_96620-T1.exon3ATCC64974_96620-T1.exon3Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96620-T1.cdsATCC64974_96620-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96620-T1ATCC64974_96620-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR036864
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:252917..253328 +
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