You are here

Home

ATCC64974_96670-T1, ATCC64974_96670-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_96670-T1
Unique NameATCC64974_96670-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:263113..265054-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_96670-T1 ID=ATCC64974_96670-T1|Name=ATCC64974_96670-T1|organism=Aspergillus niger N402|type=mRNA|length=1942bp|location=Sequence derived from alignment at OGUI01000017.1:263113..265054- (Aspergillus niger N402)
ATGAAGCTTCAAACGGCTTCCGTACTGCTCGGCAGTGCTGCTGCTGCCTC
GCCTTCCATGCAGACGCGGGCCTCCGTTGTCATCGACTACAATGTCGCAC
CTCCAAACCTATCCACTCTGCCCAATGGCTCCCTCTTCGAAACATGGCGT
CCCCGCGCCCACGTCCTGCCCCCCAACGGCCAGATCGGTGACCCCTGCCT
GCATTACACCGATCCCTCCACGGGCCTCTTCCACGTCGGCTTCCTTCACG
ATGGCAGCGGCATCTCCAGCGCCACCACTGATGATCTAGCCACCTACAAG
GACCTCAACCAAGGCAACCAAGTCATTGTTCCCGGGGGTATCAACGACCC
CGTCGCCGTCTTCGATGGCTCCGTCATCCCCAGCGGCATCAACGGCCTCC
CCACTCTCCTCTACACCTCCGTCTCCTACCTTCCCATCCACTGGTCCATC
CCCTACACCCGCGGCAGTGAGACCCAATCCCTCGCGGTCTCCTCGGACGG
TGGCAGCAACTTCACCAAGCTCGACCAGGGCCCCGTCATCCCTGGCCCTC
CCTTCGCCTACAACGTCACCGCATTCCGGGACCCATACGTCTTCCAAAAC
CCCACCCTCGACTCCCTCCTACACAGCAAGAACAACACCTGGTATACCGT
CATCTCCGGTGGTCTGCACGGCAAGGGCCCCGCCCAGTTCCTCTACCGCC
AGTACGACCCGGACTTCCAGTACTGGGAGTTCCTCGGCCAATGGTGGCAC
GAACCCACCAACTCCACCTGGGGTAACGGCACCTGGGCCGGCCGATGGGC
CTTCAACTTCGAGACCGGCAACGTCTTCAGTCTCGACGAGTACGGATACA
ACCCCCACGGCCAGATCTTCTCCACGATCGGCACCGAGGGCTCTGACCAG
CCCGTCGTGCCCCAGCTCACCAGCATCCACGACATGCTCTGGGTGTCCGG
CAACGTCTCTCGCAATGGCTCTGTCTCGTTCACCCCGAACATGGCGGGCT
TCCTCGACTGGGGCTTCTCCTCTTACGCAGCTGCCGGAAAGGTCCTCCCC
TCGACTTCTCTGCCCTCGACGAAGAGCGGCGCCCCGGACCGCTTCATCTC
GTACGTCTGGCTGTCCGGTGACCTGTTCGAACAGGCCGAAGGGTTCCCCA
CGAACCAGCAGAATTGGACCGGTACGCTGTTGCTTCCGCGAGAGTTGCGC
GTGCTGTATATCCCCAACGTGGTGGACAATGCTCTGGCTCGGGAATCTGG
TGCCTCGTGGCAGGTCGTGAGCAGCGATAGCAGTGCGGGCACCGTCGAGC
TGCAGACCCTGGGTATCTCCATTGCCCGGGAAACCAAGGCCGCCCTGCTG
TCGGGAACGTCGTTCACCGAGTCCGACCGTACTCTGAACAGCAGTGGTGT
CGTGCCGTTCAAGCGCTCCCCGTCCGAGAAGTTCTTTGTTTTGTCCGCGC
AGCTGTCCTTCCCTGCTTCGGCTAGGGGATCGGGACTCAAGAGTGGATTC
CAGATTCTCTCGTCGGAGCTGGAGAGTACTACCGTGTACTACCAGTTCTC
GAATGAGTCGATTATCGTCGACCGCAGTAACACCAGTGCTGCGGCGCGCA
CGACGGATGGTATCGATAGCAGCGCGGAGGCTGGCAAGTTGCGCCTGTTT
GACGTGTTGAATGGCGGAGAGCAGGCGATTGAGACGTTGGATTTGACTCT
CGTGGTGGATAACTCGGTCTTGGAGATCTATGCCAATGGTCGCTTTGCGT
TGAGTACTTGGGTTCGGTGAGTATCTTCCAATTTTATCAATGAAGTGTTT
ATGATGCTAACGTGGGGATAGTTCTTGGTACGCCAATTCCACGAACATCA
GTTTCTTCCAGAATGGCGTGGGTGGTGTTGCGTTCTCCAACGTGACTGTT
TCCGAGGGCTTGTATGATGCTTGGCCGGATCGTCAGTCTTGA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:263113..265054-

>ATCC64974_96670-T1 ID=ATCC64974_96670-T1|Name=ATCC64974_96670-T1|organism=Aspergillus niger N402|type=CDS|length=3774bp|location=Sequence derived from alignment at OGUI01000017.1:263113..265054- (Aspergillus niger N402)
TTCTTGGTACGCCAATTCCACGAACATCAGTTTCTTCCAGAATGGCGTGG
GTGGTGTTGCGTTCTCCAACGTGACTGTTTCCGAGGGCTTGTATGATGCT
TGGCCGGATCGTCAGTCTTGAATGAAGCTTCAAACGGCTTCCGTACTGCT
CGGCAGTGCTGCTGCTGCCTCGCCTTCCATGCAGACGCGGGCCTCCGTTG
TCATCGACTACAATGTCGCACCTCCAAACCTATCCACTCTGCCCAATGGC
TCCCTCTTCGAAACATGGCGTCCCCGCGCCCACGTCCTGCCCCCCAACGG
CCAGATCGGTGACCCCTGCCTGCATTACACCGATCCCTCCACGGGCCTCT
TCCACGTCGGCTTCCTTCACGATGGCAGCGGCATCTCCAGCGCCACCACT
GATGATCTAGCCACCTACAAGGACCTCAACCAAGGCAACCAAGTCATTGT
TCCCGGGGGTATCAACGACCCCGTCGCCGTCTTCGATGGCTCCGTCATCC
CCAGCGGCATCAACGGCCTCCCCACTCTCCTCTACACCTCCGTCTCCTAC
CTTCCCATCCACTGGTCCATCCCCTACACCCGCGGCAGTGAGACCCAATC
CCTCGCGGTCTCCTCGGACGGTGGCAGCAACTTCACCAAGCTCGACCAGG
GCCCCGTCATCCCTGGCCCTCCCTTCGCCTACAACGTCACCGCATTCCGG
GACCCATACGTCTTCCAAAACCCCACCCTCGACTCCCTCCTACACAGCAA
GAACAACACCTGGTATACCGTCATCTCCGGTGGTCTGCACGGCAAGGGCC
CCGCCCAGTTCCTCTACCGCCAGTACGACCCGGACTTCCAGTACTGGGAG
TTCCTCGGCCAATGGTGGCACGAACCCACCAACTCCACCTGGGGTAACGG
CACCTGGGCCGGCCGATGGGCCTTCAACTTCGAGACCGGCAACGTCTTCA
GTCTCGACGAGTACGGATACAACCCCCACGGCCAGATCTTCTCCACGATC
GGCACCGAGGGCTCTGACCAGCCCGTCGTGCCCCAGCTCACCAGCATCCA
CGACATGCTCTGGGTGTCCGGCAACGTCTCTCGCAATGGCTCTGTCTCGT
TCACCCCGAACATGGCGGGCTTCCTCGACTGGGGCTTCTCCTCTTACGCA
GCTGCCGGAAAGGTCCTCCCCTCGACTTCTCTGCCCTCGACGAAGAGCGG
CGCCCCGGACCGCTTCATCTCGTACGTCTGGCTGTCCGGTGACCTGTTCG
AACAGGCCGAAGGGTTCCCCACGAACCAGCAGAATTGGACCGGTACGCTG
TTGCTTCCGCGAGAGTTGCGCGTGCTGTATATCCCCAACGTGGTGGACAA
TGCTCTGGCTCGGGAATCTGGTGCCTCGTGGCAGGTCGTGAGCAGCGATA
GCAGTGCGGGCACCGTCGAGCTGCAGACCCTGGGTATCTCCATTGCCCGG
GAAACCAAGGCCGCCCTGCTGTCGGGAACGTCGTTCACCGAGTCCGACCG
TACTCTGAACAGCAGTGGTGTCGTGCCGTTCAAGCGCTCCCCGTCCGAGA
AGTTCTTTGTTTTGTCCGCGCAGCTGTCCTTCCCTGCTTCGGCTAGGGGA
TCGGGACTCAAGAGTGGATTCCAGATTCTCTCGTCGGAGCTGGAGAGTAC
TACCGTGTACTACCAGTTCTCGAATGAGTCGATTATCGTCGACCGCAGTA
ACACCAGTGCTGCGGCGCGCACGACGGATGGTATCGATAGCAGCGCGGAG
GCTGGCAAGTTGCGCCTGTTTGACGTGTTGAATGGCGGAGAGCAGGCGAT
TGAGACGTTGGATTTGACTCTCGTGGTGGATAACTCGGTCTTGGAGATCT
ATGCCAATGGTCGCTTTGCGTTGAGTACTTGGGTTCGTTCTTGGTACGCC
AATTCCACGAACATCAGTTTCTTCCAGAATGGCGTGGGTGGTGTTGCGTT
CTCCAACGTGACTGTTTCCGAGGGCTTGTATGATGCTTGGCCGGATCGTC
AGTCTTGAATGAAGCTTCAAACGGCTTCCGTACTGCTCGGCAGTGCTGCT
GCTGCCTCGCCTTCCATGCAGACGCGGGCCTCCGTTGTCATCGACTACAA
TGTCGCACCTCCAAACCTATCCACTCTGCCCAATGGCTCCCTCTTCGAAA
CATGGCGTCCCCGCGCCCACGTCCTGCCCCCCAACGGCCAGATCGGTGAC
CCCTGCCTGCATTACACCGATCCCTCCACGGGCCTCTTCCACGTCGGCTT
CCTTCACGATGGCAGCGGCATCTCCAGCGCCACCACTGATGATCTAGCCA
CCTACAAGGACCTCAACCAAGGCAACCAAGTCATTGTTCCCGGGGGTATC
AACGACCCCGTCGCCGTCTTCGATGGCTCCGTCATCCCCAGCGGCATCAA
CGGCCTCCCCACTCTCCTCTACACCTCCGTCTCCTACCTTCCCATCCACT
GGTCCATCCCCTACACCCGCGGCAGTGAGACCCAATCCCTCGCGGTCTCC
TCGGACGGTGGCAGCAACTTCACCAAGCTCGACCAGGGCCCCGTCATCCC
TGGCCCTCCCTTCGCCTACAACGTCACCGCATTCCGGGACCCATACGTCT
TCCAAAACCCCACCCTCGACTCCCTCCTACACAGCAAGAACAACACCTGG
TATACCGTCATCTCCGGTGGTCTGCACGGCAAGGGCCCCGCCCAGTTCCT
CTACCGCCAGTACGACCCGGACTTCCAGTACTGGGAGTTCCTCGGCCAAT
GGTGGCACGAACCCACCAACTCCACCTGGGGTAACGGCACCTGGGCCGGC
CGATGGGCCTTCAACTTCGAGACCGGCAACGTCTTCAGTCTCGACGAGTA
CGGATACAACCCCCACGGCCAGATCTTCTCCACGATCGGCACCGAGGGCT
CTGACCAGCCCGTCGTGCCCCAGCTCACCAGCATCCACGACATGCTCTGG
GTGTCCGGCAACGTCTCTCGCAATGGCTCTGTCTCGTTCACCCCGAACAT
GGCGGGCTTCCTCGACTGGGGCTTCTCCTCTTACGCAGCTGCCGGAAAGG
TCCTCCCCTCGACTTCTCTGCCCTCGACGAAGAGCGGCGCCCCGGACCGC
TTCATCTCGTACGTCTGGCTGTCCGGTGACCTGTTCGAACAGGCCGAAGG
GTTCCCCACGAACCAGCAGAATTGGACCGGTACGCTGTTGCTTCCGCGAG
AGTTGCGCGTGCTGTATATCCCCAACGTGGTGGACAATGCTCTGGCTCGG
GAATCTGGTGCCTCGTGGCAGGTCGTGAGCAGCGATAGCAGTGCGGGCAC
CGTCGAGCTGCAGACCCTGGGTATCTCCATTGCCCGGGAAACCAAGGCCG
CCCTGCTGTCGGGAACGTCGTTCACCGAGTCCGACCGTACTCTGAACAGC
AGTGGTGTCGTGCCGTTCAAGCGCTCCCCGTCCGAGAAGTTCTTTGTTTT
GTCCGCGCAGCTGTCCTTCCCTGCTTCGGCTAGGGGATCGGGACTCAAGA
GTGGATTCCAGATTCTCTCGTCGGAGCTGGAGAGTACTACCGTGTACTAC
CAGTTCTCGAATGAGTCGATTATCGTCGACCGCAGTAACACCAGTGCTGC
GGCGCGCACGACGGATGGTATCGATAGCAGCGCGGAGGCTGGCAAGTTGC
GCCTGTTTGACGTGTTGAATGGCGGAGAGCAGGCGATTGAGACGTTGGAT
TTGACTCTCGTGGTGGATAACTCGGTCTTGGAGATCTATGCCAATGGTCG
CTTTGCGTTGAGTACTTGGGTTCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_96670ATCC64974_96670Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96670-T1ATCC64974_96670-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96670-T1.cdsATCC64974_96670-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_96670-T1.exon2ATCC64974_96670-T1.exon2Aspergillus niger N402exon
ATCC64974_96670-T1.exon1ATCC64974_96670-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteCAZy:GH32
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR023296
DBxrefInterPro:IPR013189
DBxrefInterPro:IPR013148
DBxrefInterPro:IPR001362
DBxrefPFAM:PF00251
DBxrefPFAM:PF08244
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:263113..265054 -
Powered by Drupal