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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:489949..491272+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_97460-T1 ID=ATCC64974_97460-T1|Name=ATCC64974_97460-T1|organism=Aspergillus niger N402|type=mRNA|length=1324bp|location=Sequence derived from alignment at OGUI01000017.1:489949..491272+ (Aspergillus niger N402)
ATGCCGCCCAGAAGGACCCATACCAAGTCGCGCAATGGCTGTGACCAGTG
TAAGAAGAGACGCGTCAAGGTAAGCACCGTCCAGTTCCATATATTATCAT
ATCCCGTATCTCCTGGGCTACGCCTGTGTTGATTAGCCGAAAACTGTTTA
GTTCTGGAACTATTCAATACCCGTCTAATTCACTGTCATCCTCGCAGCAC
TCTTCTAACGGCTATAGTGCGATGAACGAGGCCCACCATGCTCCAATTGC
ATTAGCCGGGAGCTGGCATGTACTTATTTTAAGACCCCCGCGGCACGCAA
GGAGACTACATTATCGACAAGTCCTGCTCCTTTGCAGTCCGCCAGATTCG
TAGCACCCTCTGAAGCAACACTTTATGCCAACCAGCCCATCTCCCGCCAT
GGATCTTCACTGCCAAACCTTGCTTGCCTGCGGGAGCTTGAGCTGATGCA
CAAGTTTTCCACGGAGACCTATCAAAGCCTTTGCAATGAACCAACAGACC
ACCACGAGTGGCAGTATGTTATCCCTCGCAAAGCTTTGCAGCACGAATTC
CTCATGAGCGGGATACTTGCGGTTGCATCGCTCCATATCGCGTCGACACT
TGATCCACCAGAAGCACTCTCCTATATTGACACAGCTCTGGAGTACCATA
ATCTTGCATTTGCACCTTTTCGCCATGCCATTGATAATCTTACTCCAGCC
AATTGTGACGCAGTTCTTGCTCACTCGGTCATTATAACTGTTATCGGCAT
AACATTACCACAATCGGCTGTTGCACGAGAAGAGAGTCAGAGCATGACTG
AAAATATCATTGTCGTTTTCGAGTTGCTACATGGTGTCAGTAAGATCTTT
ACCATCAGTCGTTCTTGGCTTCAAGGAAAGTTGTTCACTTCCCGGAGAGG
CTTCTGGGAAAATGAGCTTTCCATACTAGACAGTGAAATCGAGGCTGCAC
TAGACCGATTAACGGCCCTGAACAATGACATGCTTGCTACTGACAATGCG
GAGCAGCATCACATTATCAAAGATGCAATAGCCCTTCTACGCCGTTGTTT
CTGCAGATACAACCATGCCCGAGACGCGGCTTCCATCCTCGCATGGGTTG
CAACAGTTGATAAAAAATTCGTCCATGCTCTGAGATGCCGTCAAACTCTC
GCGCTGCTAGTTCTCATGCACTGGGGTGCTCTCCTCCATGAGCTTGATGG
GAAAGTATGGTGGGCAAAGAATTCTGGAACAGCTCTGGTTTCGGAGCTGC
TGAATGCGCTTCGTCCCTGCGACGTGCGGTGGGAAGGGGCATTGCAGTGG
CCACAACGTAAAATAGGACTTTGA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:489949..491272+ >ATCC64974_97460-T1 ID=ATCC64974_97460-T1|Name=ATCC64974_97460-T1|organism=Aspergillus niger N402|type=CDS|length=2352bp|location=Sequence derived from alignment at OGUI01000017.1:489949..491272+ (Aspergillus niger N402)
ATGCCGCCCAGAAGGACCCATACCAAGTCGCGCAATGGCTGTGACCAGTG
TAAGAAGAGACGCGTCAAGTGCGATGAACGAGGCCCACCATGCTCCAATT
GCATTAGCCGGGAGCTGGCATGTACTTATTTTAAGACCCCCGCGGCACGC
AAGGAGACTACATTATCGACAAGTCCTGCTCCTTTGCAGTCCGCCAGATT
CGTAGCACCCTCTGAAGCAACACTTTATGCCAACCAGCCCATCTCCCGCC
ATGGATCTTCACTGCCAAACCTTGCTTGCCTGCGGGAGCTTGAGCTGATG
CACAAGTTTTCCACGGAGACCTATCAAAGCCTTTGCAATGAACCAACAGA
CCACCACGAGTGGCAGTATGTTATCCCTCGCAAAGCTTTGCAGCACGAAT
TCCTCATGAGCGGGATACTTGCGGTTGCATCGCTCCATATCGCGTCGACA
CTTGATCCACCAGAAGCACTCTCCTATATTGACACAGCTCTGGAGTACCA
TAATCTTGCATTTGCACCTTTTCGCCATGCCATTGATAATCTTACTCCAG
CCAATTGTGACGCAGTTCTTGCTCACTCGGTCATTATAACTGTTATCGGC
ATAACATTACCACAATCGGCTGTTGCACGAGAAGAGAGTCAGAGCATGAC
TGAAAATATCATTGTCGTTTTCGAGTTGCTACATGGTGTCAGTAAGATCT
TTACCATCAGTCGTTCTTGGCTTCAAGGAAAGTTGTTCACTTCCCGGAGA
GGCTTCTGGGAAAATGAGCTTTCCATACTAGACAGTGAAATCGAGGCTGC
ACTAGACCGATTAACGGCCCTGAACAATGACATGCTTGCTACTGACAATG
CGGAGCAGCATCACATTATCAAAGATGCAATAGCCCTTCTACGCCGTTGT
TTCTGCAGATACAACCATGCCCGAGACGCGGCTTCCATCCTCGCATGGGT
TGCAACAGTTGATAAAAAATTCGTCCATGCTCTGAGATGCCGTCAAACTC
TCGCGCTGCTAGTTCTCATGCACTGGGGTGCTCTCCTCCATGAGCTTGAT
GGGAAAGTATGGTGGGCAAAGAATTCTGGAACAGCTCTGGTTTCGGAGCT
GCTGAATGCGCTTCGTCCCTGCGACGTGCGGTGGGAAGGGGCATTGCAGT
GGCCACAACGTAAAATAGGACTTTGAATGCCGCCCAGAAGGACCCATACC
AAGTCGCGCAATGGCTGTGACCAGTGTAAGAAGAGACGCGTCAAGTGCGA
TGAACGAGGCCCACCATGCTCCAATTGCATTAGCCGGGAGCTGGCATGTA
CTTATTTTAAGACCCCCGCGGCACGCAAGGAGACTACATTATCGACAAGT
CCTGCTCCTTTGCAGTCCGCCAGATTCGTAGCACCCTCTGAAGCAACACT
TTATGCCAACCAGCCCATCTCCCGCCATGGATCTTCACTGCCAAACCTTG
CTTGCCTGCGGGAGCTTGAGCTGATGCACAAGTTTTCCACGGAGACCTAT
CAAAGCCTTTGCAATGAACCAACAGACCACCACGAGTGGCAGTATGTTAT
CCCTCGCAAAGCTTTGCAGCACGAATTCCTCATGAGCGGGATACTTGCGG
TTGCATCGCTCCATATCGCGTCGACACTTGATCCACCAGAAGCACTCTCC
TATATTGACACAGCTCTGGAGTACCATAATCTTGCATTTGCACCTTTTCG
CCATGCCATTGATAATCTTACTCCAGCCAATTGTGACGCAGTTCTTGCTC
ACTCGGTCATTATAACTGTTATCGGCATAACATTACCACAATCGGCTGTT
GCACGAGAAGAGAGTCAGAGCATGACTGAAAATATCATTGTCGTTTTCGA
GTTGCTACATGGTGTCAGTAAGATCTTTACCATCAGTCGTTCTTGGCTTC
AAGGAAAGTTGTTCACTTCCCGGAGAGGCTTCTGGGAAAATGAGCTTTCC
ATACTAGACAGTGAAATCGAGGCTGCACTAGACCGATTAACGGCCCTGAA
CAATGACATGCTTGCTACTGACAATGCGGAGCAGCATCACATTATCAAAG
ATGCAATAGCCCTTCTACGCCGTTGTTTCTGCAGATACAACCATGCCCGA
GACGCGGCTTCCATCCTCGCATGGGTTGCAACAGTTGATAAAAAATTCGT
CCATGCTCTGAGATGCCGTCAAACTCTCGCGCTGCTAGTTCTCATGCACT
GGGGTGCTCTCCTCCATGAGCTTGATGGGAAAGTATGGTGGGCAAAGAAT
TCTGGAACAGCTCTGGTTTCGGAGCTGCTGAATGCGCTTCGTCCCTGCGA
CGTGCGGTGGGAAGGGGCATTGCAGTGGCCACAACGTAAAATAGGACTTT
GA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_97460-T1 | ATCC64974_97460-T1-protein | Aspergillus niger N402 | polypeptide |
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:489949..491272 + |
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