You are here

Home

ATCC64974_9770-T1, ATCC64974_9770-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_9770-T1
Unique NameATCC64974_9770-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000002.1:748380..749499+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_9770-T1 ID=ATCC64974_9770-T1|Name=ATCC64974_9770-T1|organism=Aspergillus niger N402|type=mRNA|length=1120bp|location=Sequence derived from alignment at OGUI01000002.1:748380..749499+ (Aspergillus niger N402)
ATGGTCTCCTCGGAACCCACTGTCAAACGATCCTCTTCCTCCTTACCAGA
AGGTGCAGACGCTCCTGATGTAAAACCAACGAAACGCCCATATCACCATC
ATCATCGCCTACAAAGTCCGGTCGCCCCAGCGTTGCCGGAACCCGCTATT
GTCGACGAGGCCTGCATCGACCATGTCCTCAACCGGTCTATCGGGCAGTA
TCTACAAGAATGCGGATTTGATATCGCCGACCCTGCAGCGCTGGACGCCT
TTCGCAGGATAACGGAGGAATGTATGTTGGAAAATTAGGTCTCAGAAGGA
AACGTTCATGATATTGATGGATTTGGTTCTAGATCTGCTGAGATTCGCCT
CATATGTGCGCCAAGCGATGCTATCCAGCCGGCGCATACAACCTATCCCA
CAAGATTTCGAATATGCCTTGAAAAGACAGTCCGTGCCTGTCGGCGACCT
CCTTCCGCACGTGAAACGCCATCCAAACATCGACCCTATCCCCACCCTCC
TACCAAGCCCTCCGCCGGAAGAGGACTCATTCAAGACTTTGCCGTCTTTA
GGCCCGCAGCTCAGCGGCGAAGATGATCGCGTTCACAACGCTCATATTCC
GAAACATTTCCCCGATTTCCCTAGTAAACACACGTATCGTCACACGCCGG
TTTTCACAGAACGAGAGCAAGATCCGCGCGTCATTCGAGAGCGAGCCACG
GAGGATGGTCGACATGGCGAGGAGGCGTTGCGCAAGTTGGCTCGTGCAGC
GTTCAAAGACAACAATTCTGGCTCATCGGTCCGGGATAAGAAGCAATGGG
GACGACGAGCAGAGAGTATGGACGGAATGTTTGAGAAGACGATCAGGGCT
CTCGCAAAGAAGATGCAGAAGCCTGCGACGGCCCCAGGTTCTGCTGGTCC
TATGGAGATCGACTCGGGAGCTGGTGCAGATACAGAGGCCAAACCATCCC
GCTCGAAGCTGGCGTTGAACATAGAGCTGCCTCCCATCATCAACTGCGAG
AGAGACTTGTGGCGACGGGCGCCTACATCTGGGAGTCGACGAACAGAAGA
AAACAAGCTATCAAGTGCGAAAGATACGCCCGACATGTCGAGGGTGGATA
GCTGGGTGAATGCATCATGA
back to top

Coding sequence (CDS) from alignment at OGUI01000002.1:748380..749499+

>ATCC64974_9770-T1 ID=ATCC64974_9770-T1|Name=ATCC64974_9770-T1|organism=Aspergillus niger N402|type=CDS|length=2118bp|location=Sequence derived from alignment at OGUI01000002.1:748380..749499+ (Aspergillus niger N402)
ATGGTCTCCTCGGAACCCACTGTCAAACGATCCTCTTCCTCCTTACCAGA
AGGTGCAGACGCTCCTGATGTAAAACCAACGAAACGCCCATATCACCATC
ATCATCGCCTACAAAGTCCGGTCGCCCCAGCGTTGCCGGAACCCGCTATT
GTCGACGAGGCCTGCATCGACCATGTCCTCAACCGGTCTATCGGGCAGTA
TCTACAAGAATGCGGATTTGATATCGCCGACCCTGCAGCGCTGGACGCCT
TTCGCAGGATAACGGAGGAATATCTGCTGAGATTCGCCTCATATGTGCGC
CAAGCGATGCTATCCAGCCGGCGCATACAACCTATCCCACAAGATTTCGA
ATATGCCTTGAAAAGACAGTCCGTGCCTGTCGGCGACCTCCTTCCGCACG
TGAAACGCCATCCAAACATCGACCCTATCCCCACCCTCCTACCAAGCCCT
CCGCCGGAAGAGGACTCATTCAAGACTTTGCCGTCTTTAGGCCCGCAGCT
CAGCGGCGAAGATGATCGCGTTCACAACGCTCATATTCCGAAACATTTCC
CCGATTTCCCTAGTAAACACACGTATCGTCACACGCCGGTTTTCACAGAA
CGAGAGCAAGATCCGCGCGTCATTCGAGAGCGAGCCACGGAGGATGGTCG
ACATGGCGAGGAGGCGTTGCGCAAGTTGGCTCGTGCAGCGTTCAAAGACA
ACAATTCTGGCTCATCGGTCCGGGATAAGAAGCAATGGGGACGACGAGCA
GAGAGTATGGACGGAATGTTTGAGAAGACGATCAGGGCTCTCGCAAAGAA
GATGCAGAAGCCTGCGACGGCCCCAGGTTCTGCTGGTCCTATGGAGATCG
ACTCGGGAGCTGGTGCAGATACAGAGGCCAAACCATCCCGCTCGAAGCTG
GCGTTGAACATAGAGCTGCCTCCCATCATCAACTGCGAGAGAGACTTGTG
GCGACGGGCGCCTACATCTGGGAGTCGACGAACAGAAGAAAACAAGCTAT
CAAGTGCGAAAGATACGCCCGACATGTCGAGGGTGGATAGCTGGGTGAAT
GCATCATGAATGGTCTCCTCGGAACCCACTGTCAAACGATCCTCTTCCTC
CTTACCAGAAGGTGCAGACGCTCCTGATGTAAAACCAACGAAACGCCCAT
ATCACCATCATCATCGCCTACAAAGTCCGGTCGCCCCAGCGTTGCCGGAA
CCCGCTATTGTCGACGAGGCCTGCATCGACCATGTCCTCAACCGGTCTAT
CGGGCAGTATCTACAAGAATGCGGATTTGATATCGCCGACCCTGCAGCGC
TGGACGCCTTTCGCAGGATAACGGAGGAATATCTGCTGAGATTCGCCTCA
TATGTGCGCCAAGCGATGCTATCCAGCCGGCGCATACAACCTATCCCACA
AGATTTCGAATATGCCTTGAAAAGACAGTCCGTGCCTGTCGGCGACCTCC
TTCCGCACGTGAAACGCCATCCAAACATCGACCCTATCCCCACCCTCCTA
CCAAGCCCTCCGCCGGAAGAGGACTCATTCAAGACTTTGCCGTCTTTAGG
CCCGCAGCTCAGCGGCGAAGATGATCGCGTTCACAACGCTCATATTCCGA
AACATTTCCCCGATTTCCCTAGTAAACACACGTATCGTCACACGCCGGTT
TTCACAGAACGAGAGCAAGATCCGCGCGTCATTCGAGAGCGAGCCACGGA
GGATGGTCGACATGGCGAGGAGGCGTTGCGCAAGTTGGCTCGTGCAGCGT
TCAAAGACAACAATTCTGGCTCATCGGTCCGGGATAAGAAGCAATGGGGA
CGACGAGCAGAGAGTATGGACGGAATGTTTGAGAAGACGATCAGGGCTCT
CGCAAAGAAGATGCAGAAGCCTGCGACGGCCCCAGGTTCTGCTGGTCCTA
TGGAGATCGACTCGGGAGCTGGTGCAGATACAGAGGCCAAACCATCCCGC
TCGAAGCTGGCGTTGAACATAGAGCTGCCTCCCATCATCAACTGCGAGAG
AGACTTGTGGCGACGGGCGCCTACATCTGGGAGTCGACGAACAGAAGAAA
ACAAGCTATCAAGTGCGAAAGATACGCCCGACATGTCGAGGGTGGATAGC
TGGGTGAATGCATCATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_9770ATCC64974_9770Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9770-T1.exon1ATCC64974_9770-T1.exon1Aspergillus niger N402exon
ATCC64974_9770-T1.exon2ATCC64974_9770-T1.exon2Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9770-T1.cdsATCC64974_9770-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_9770-T1ATCC64974_9770-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR019473
DBxrefInterPro:IPR006565
DBxrefPFAM:PF10406
DBxrefPFAM:PF07524
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000002.1supercontigOGUI01000002.1:748380..749499 +
Powered by Drupal