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ATCC64974_98390-T1, ATCC64974_98390-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_98390-T1
Unique NameATCC64974_98390-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:793741..794997-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_98390-T1 ID=ATCC64974_98390-T1|Name=ATCC64974_98390-T1|organism=Aspergillus niger N402|type=mRNA|length=1257bp|location=Sequence derived from alignment at OGUI01000017.1:793741..794997- (Aspergillus niger N402)
ATGGTAAGCACATAGAATCGTCCATTTCACGCCTCTTCTATTCAATTAGA
ATTGAGCTATCGACTACGCTGCGAATATGTCGTGTGACGATTTCCACGTC
CCGCTTCATCTCGCAACAGTCGAGAAGCGACAATAAAAAAAATTTCCGTT
GATTCGCTCTCTTCACAGTCCGTAAAACGATTGTGAAGGGGTGGATCAGC
GATGATTTTTGGCTGGAAGACACAAAGCTGTTCTTAAGGAAACTTGGGAC
AGTTTTGTGTCTCTCCCTAGAGTTCAAGGAAGATGCAGCAAGATGGTGGA
CAAGATTGCTGATCTTCTTTTCTCAATGATAGCCTGCCCAGAAGTCCGGA
AAGAAAACTGCCCCCCTCCCTTACCCCCAGGGTAAGGCTGGCGCTAAGAA
GGCTCCCAAGGTATGTGCTGACACCCTACATCAACTACTGAAACCACCAT
GAGAGAGATATATACTAACATGGTATGGATAGAACCCTCTCATCGAGAAG
CGCCCCCGCAACTTCGGCATTGGCCAGGACATCCAGCCCAAGCGCAACCT
CGGTCGCTTCGTCAAGTGGCCCGAGTATGTCCGTCTGCAGCGCCAGAAGA
AGATCTTGAACCTCCGTCTCAAGGTCCCTCCTTCCATTGCTCAGTTCCAG
AACACCCTGGACCGCAACACCGCTGCCCAGACCTTCAAGTTCCTCAACAA
GTACCGCCCCGAGACCAAGGTCGAGAAGAAGGAGCGTCTCCACGCCGAGG
CCACCGCCGTCGCTGAGGGCAAGAAGAAGGAGGATGTCTCCAAGAAGCCC
TACAACGTCAAGTACGGTCTCAACCACGTTGTCGGCCTCGTCGAGAACAA
GAAGGCTTCCCTCGTCCTGATTGCTCACGACGTTGACCCCATTGAGCTGG
TTGTCTTCCTTCCCGCTCTTTGCCGCAAGATGGGTGTCCCTTACGCTATT
GTTAAGGGCAAGGCTCGTCTCGGTACCGTTGTCCACAAGAAGGTATTTAT
CCCCTTATATATATCTCTCTACCCTCCAATAGCATTAAACTAATGAGTTG
GAATAGACCTCCGCTGTCCTCGCTCTCACCGAGGTCCGCTCCGAGGACAA
GGCTGAGTTCGCCAAGCTCCTCTCCGCCGTCAAGGAGGGCTACTCCGACA
AGTACGAGGAGTCCCGCCGCCACTGGGGTGGTGGTATCATGGGCGCCAAG
GCTGTTGCCCGCCAGGAGAAGAAGCGCAAGGCCGTTGAGGGTGCCATCCG
TGTCTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:793741..794997-

>ATCC64974_98390-T1 ID=ATCC64974_98390-T1|Name=ATCC64974_98390-T1|organism=Aspergillus niger N402|type=CDS|length=3168bp|location=Sequence derived from alignment at OGUI01000017.1:793741..794997- (Aspergillus niger N402)
ACCTCCGCTGTCCTCGCTCTCACCGAGGTCCGCTCCGAGGACAAGGCTGA
GTTCGCCAAGCTCCTCTCCGCCGTCAAGGAGGGCTACTCCGACAAGTACG
AGGAGTCCCGCCGCCACTGGGGTGGTGGTATCATGGGCGCCAAGGCTGTT
GCCCGCCAGGAGAAGAAGCGCAAGGCCGTTGAGGGTGCCATCCGTGTCTA
AAACCCTCTCATCGAGAAGCGCCCCCGCAACTTCGGCATTGGCCAGGACA
TCCAGCCCAAGCGCAACCTCGGTCGCTTCGTCAAGTGGCCCGAGTATGTC
CGTCTGCAGCGCCAGAAGAAGATCTTGAACCTCCGTCTCAAGGTCCCTCC
TTCCATTGCTCAGTTCCAGAACACCCTGGACCGCAACACCGCTGCCCAGA
CCTTCAAGTTCCTCAACAAGTACCGCCCCGAGACCAAGGTCGAGAAGAAG
GAGCGTCTCCACGCCGAGGCCACCGCCGTCGCTGAGGGCAAGAAGAAGGA
GGATGTCTCCAAGAAGCCCTACAACGTCAAGTACGGTCTCAACCACGTTG
TCGGCCTCGTCGAGAACAAGAAGGCTTCCCTCGTCCTGATTGCTCACGAC
GTTGACCCCATTGAGCTGGTTGTCTTCCTTCCCGCTCTTTGCCGCAAGAT
GGGTGTCCCTTACGCTATTGTTAAGGGCAAGGCTCGTCTCGGTACCGTTG
TCCACAAGAAGCCTGCCCAGAAGTCCGGAAAGAAAACTGCCCCCCTCCCT
TACCCCCAGGGTAAGGCTGGCGCTAAGAAGGCTCCCAAGATGACCTCCGC
TGTCCTCGCTCTCACCGAGGTCCGCTCCGAGGACAAGGCTGAGTTCGCCA
AGCTCCTCTCCGCCGTCAAGGAGGGCTACTCCGACAAGTACGAGGAGTCC
CGCCGCCACTGGGGTGGTGGTATCATGGGCGCCAAGGCTGTTGCCCGCCA
GGAGAAGAAGCGCAAGGCCGTTGAGGGTGCCATCCGTGTCTAAAACCCTC
TCATCGAGAAGCGCCCCCGCAACTTCGGCATTGGCCAGGACATCCAGCCC
AAGCGCAACCTCGGTCGCTTCGTCAAGTGGCCCGAGTATGTCCGTCTGCA
GCGCCAGAAGAAGATCTTGAACCTCCGTCTCAAGGTCCCTCCTTCCATTG
CTCAGTTCCAGAACACCCTGGACCGCAACACCGCTGCCCAGACCTTCAAG
TTCCTCAACAAGTACCGCCCCGAGACCAAGGTCGAGAAGAAGGAGCGTCT
CCACGCCGAGGCCACCGCCGTCGCTGAGGGCAAGAAGAAGGAGGATGTCT
CCAAGAAGCCCTACAACGTCAAGTACGGTCTCAACCACGTTGTCGGCCTC
GTCGAGAACAAGAAGGCTTCCCTCGTCCTGATTGCTCACGACGTTGACCC
CATTGAGCTGGTTGTCTTCCTTCCCGCTCTTTGCCGCAAGATGGGTGTCC
CTTACGCTATTGTTAAGGGCAAGGCTCGTCTCGGTACCGTTGTCCACAAG
AAGCCTGCCCAGAAGTCCGGAAAGAAAACTGCCCCCCTCCCTTACCCCCA
GGGTAAGGCTGGCGCTAAGAAGGCTCCCAAGATGACCTCCGCTGTCCTCG
CTCTCACCGAGGTCCGCTCCGAGGACAAGGCTGAGTTCGCCAAGCTCCTC
TCCGCCGTCAAGGAGGGCTACTCCGACAAGTACGAGGAGTCCCGCCGCCA
CTGGGGTGGTGGTATCATGGGCGCCAAGGCTGTTGCCCGCCAGGAGAAGA
AGCGCAAGGCCGTTGAGGGTGCCATCCGTGTCTAAAACCCTCTCATCGAG
AAGCGCCCCCGCAACTTCGGCATTGGCCAGGACATCCAGCCCAAGCGCAA
CCTCGGTCGCTTCGTCAAGTGGCCCGAGTATGTCCGTCTGCAGCGCCAGA
AGAAGATCTTGAACCTCCGTCTCAAGGTCCCTCCTTCCATTGCTCAGTTC
CAGAACACCCTGGACCGCAACACCGCTGCCCAGACCTTCAAGTTCCTCAA
CAAGTACCGCCCCGAGACCAAGGTCGAGAAGAAGGAGCGTCTCCACGCCG
AGGCCACCGCCGTCGCTGAGGGCAAGAAGAAGGAGGATGTCTCCAAGAAG
CCCTACAACGTCAAGTACGGTCTCAACCACGTTGTCGGCCTCGTCGAGAA
CAAGAAGGCTTCCCTCGTCCTGATTGCTCACGACGTTGACCCCATTGAGC
TGGTTGTCTTCCTTCCCGCTCTTTGCCGCAAGATGGGTGTCCCTTACGCT
ATTGTTAAGGGCAAGGCTCGTCTCGGTACCGTTGTCCACAAGAAGCCTGC
CCAGAAGTCCGGAAAGAAAACTGCCCCCCTCCCTTACCCCCAGGGTAAGG
CTGGCGCTAAGAAGGCTCCCAAGATGACCTCCGCTGTCCTCGCTCTCACC
GAGGTCCGCTCCGAGGACAAGGCTGAGTTCGCCAAGCTCCTCTCCGCCGT
CAAGGAGGGCTACTCCGACAAGTACGAGGAGTCCCGCCGCCACTGGGGTG
GTGGTATCATGGGCGCCAAGGCTGTTGCCCGCCAGGAGAAGAAGCGCAAG
GCCGTTGAGGGTGCCATCCGTGTCTAAAACCCTCTCATCGAGAAGCGCCC
CCGCAACTTCGGCATTGGCCAGGACATCCAGCCCAAGCGCAACCTCGGTC
GCTTCGTCAAGTGGCCCGAGTATGTCCGTCTGCAGCGCCAGAAGAAGATC
TTGAACCTCCGTCTCAAGGTCCCTCCTTCCATTGCTCAGTTCCAGAACAC
CCTGGACCGCAACACCGCTGCCCAGACCTTCAAGTTCCTCAACAAGTACC
GCCCCGAGACCAAGGTCGAGAAGAAGGAGCGTCTCCACGCCGAGGCCACC
GCCGTCGCTGAGGGCAAGAAGAAGGAGGATGTCTCCAAGAAGCCCTACAA
CGTCAAGTACGGTCTCAACCACGTTGTCGGCCTCGTCGAGAACAAGAAGG
CTTCCCTCGTCCTGATTGCTCACGACGTTGACCCCATTGAGCTGGTTGTC
TTCCTTCCCGCTCTTTGCCGCAAGATGGGTGTCCCTTACGCTATTGTTAA
GGGCAAGGCTCGTCTCGGTACCGTTGTCCACAAGAAGCCTGCCCAGAAGT
CCGGAAAGAAAACTGCCCCCCTCCCTTACCCCCAGGGTAAGGCTGGCGCT
AAGAAGGCTCCCAAGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:1990904ribonucleoprotein complex
Vocabulary: Biological Process
TermDefinition
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL8ATCC64974_98390Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98390-T1ATCC64974_98390-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98390-T1.cdsATCC64974_98390-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98390-T1.exon4ATCC64974_98390-T1.exon4Aspergillus niger N402exon
ATCC64974_98390-T1.exon3ATCC64974_98390-T1.exon3Aspergillus niger N402exon
ATCC64974_98390-T1.exon2ATCC64974_98390-T1.exon2Aspergillus niger N402exon
ATCC64974_98390-T1.exon1ATCC64974_98390-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
DBxrefInterPro:IPR029064
DBxrefInterPro:IPR004037
DBxrefInterPro:IPR004038
DBxrefInterPro:IPR038524
DBxrefInterPro:IPR018492
DBxrefInterPro:IPR001921
DBxrefPFAM:PF01248
Product60S ribosomal protein L8
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:793741..794997 -
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