You are here

Home

ATCC64974_98460-T1, ATCC64974_98460-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_98460-T1
Unique NameATCC64974_98460-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:820928..821506+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_98460-T1 ID=ATCC64974_98460-T1|Name=ATCC64974_98460-T1|organism=Aspergillus niger N402|type=mRNA|length=579bp|location=Sequence derived from alignment at OGUI01000017.1:820928..821506+ (Aspergillus niger N402)
ATGGAACTGGCAATTTGTCGATTACTCAACTGCCTCAAAGACGAACGGTT
CAAGGTTATATACCAGGCACCTACCAAGTCTCTTTGTTCTGAGAAGTTCA
GAGACTGGAGTAGAAAATTCAATACATTAGGGCTGCAATGTGCAGAGTTG
ACGGGGGATACAGACCACACTCAACTGAGGAGTGTTCAGAACAGCCAAGT
TATTATCACGACACCCGAGAAGTGGGACAGCATGACGCGAAAGTGGAAGG
ATCATGCCCGGTTAATGCAGCTCGTCAGGTTATTCCTCATTGACGAGGTC
CATATCCTCAAGGAAGCTCGCGGTGCAACCCTAGAAGCTGTCGTATCCCG
CATGAAAGCAAACGGGTCGAACGTTCGCTTTGTCGCTCTGAGTGCTACTG
TTCCAAACTCAGAGGACATCGCAACTTGGATAGGTAGGGACCCAGTAAAT
CAGCATGTGCCTGCCCACAGAGAGCACTTTGGGGAAGACTTTCGCCCTGT
GAAGTTGCAGAAGTTCGTGTACGGCTACCAGTCGCACGCCAACGACTTTG
CATTCGATAGAATGTGCACCTCTAAGTAA
back to top

Coding sequence (CDS) from alignment at OGUI01000017.1:820928..821506+

>ATCC64974_98460-T1 ID=ATCC64974_98460-T1|Name=ATCC64974_98460-T1|organism=Aspergillus niger N402|type=CDS|length=579bp|location=Sequence derived from alignment at OGUI01000017.1:820928..821506+ (Aspergillus niger N402)
ATGGAACTGGCAATTTGTCGATTACTCAACTGCCTCAAAGACGAACGGTT
CAAGGTTATATACCAGGCACCTACCAAGTCTCTTTGTTCTGAGAAGTTCA
GAGACTGGAGTAGAAAATTCAATACATTAGGGCTGCAATGTGCAGAGTTG
ACGGGGGATACAGACCACACTCAACTGAGGAGTGTTCAGAACAGCCAAGT
TATTATCACGACACCCGAGAAGTGGGACAGCATGACGCGAAAGTGGAAGG
ATCATGCCCGGTTAATGCAGCTCGTCAGGTTATTCCTCATTGACGAGGTC
CATATCCTCAAGGAAGCTCGCGGTGCAACCCTAGAAGCTGTCGTATCCCG
CATGAAAGCAAACGGGTCGAACGTTCGCTTTGTCGCTCTGAGTGCTACTG
TTCCAAACTCAGAGGACATCGCAACTTGGATAGGTAGGGACCCAGTAAAT
CAGCATGTGCCTGCCCACAGAGAGCACTTTGGGGAAGACTTTCGCCCTGT
GAAGTTGCAGAAGTTCGTGTACGGCTACCAGTCGCACGCCAACGACTTTG
CATTCGATAGAATGTGCACCTCTAAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_98460ATCC64974_98460Aspergillus niger N402gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98460-T1.exon1ATCC64974_98460-T1.exon1Aspergillus niger N402exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98460-T1.cdsATCC64974_98460-T1.cdsAspergillus niger N402CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98460-T1ATCC64974_98460-T1-proteinAspergillus niger N402polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR014001
DBxrefPFAM:PF04851
DBxrefPFAM:PF00270
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:820928..821506 +
Powered by Drupal