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ATCC64974_98520-T1, ATCC64974_98520-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_98520-T1
Unique NameATCC64974_98520-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:838988..839895-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_98520-T1 ID=ATCC64974_98520-T1|Name=ATCC64974_98520-T1|organism=Aspergillus niger N402|type=mRNA|length=908bp|location=Sequence derived from alignment at OGUI01000017.1:838988..839895- (Aspergillus niger N402)
ATGCATTCCCCTTTGGATCCAACCCTTCAATTCGACTCTATTGAGGACAC
AATAGCGGCCTTTAGTGAGTCCCCCAGCTCCAGAACTTCCCACCCGCGCC
GGCGCGGGAGGCAAATCCATCCCACCACATTCATTACACATACAAACAAC
ATCCATGTAACTAACAAGCACACCAATGCACCAGAGAACGGCGAATTCAT
CATCGTGCTCGATTCCCAAGACCGCGAAAATGAAGGCGATCTCATCATTG
CCGCTGACTCCATCACTCCGGCGCAGATGGCTTTCCTTGTTCGCCACACA
AGGTAAATCCCCCATTTCCCCCACCTCCTTTCCCCACGAGCACATCAAAT
GTTACTTAACGGGATCACCAATGCTAATGATGGATGAATAGTGGCCTGAT
ATGCGCCCCCGTCACCCCCGAAATAGCCACCCGCCTCGCCCTCCCTCAAA
TGGTCACCGAGAACGCTGATCCTAAGGGAACCGCGTACACCGTCTCCGTC
GACGCAGCTGACCCCTCTATAACAACTGGTATCTCGGCACAAGACCGCGC
TCTTGCCTGTAGGATCCTGGGATCGCCGACATCCACGGCAGCGGATCTGC
GCCGACCCGGTCATGTAATTCCGCTACAGGCCAGACCCGGAGGTGTCAGG
GAACGCACGGGACATACAGAGGCGGCAGTGGAGTTCTGTCGGTTGGCGGG
CAAGACGCAGGCGGGTGTCATCGCGGAACTTGTGGAGGATGGAGAGGTCG
TACCGGGAGTTCCAGAAATTGGGGGTAACAATGGGATGATGAGACGGGAT
GGATGCTTGAGGTTTGGAAAGAAGTGGGGGATCAAGGTATGTACGATTGA
GGATTTGGTGGAGTATGTTGAGAGGGTGGAGGGTGCTGGCGCTGTGAATG
GGAACTGA
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Coding sequence (CDS) from alignment at OGUI01000017.1:838988..839895-

>ATCC64974_98520-T1 ID=ATCC64974_98520-T1|Name=ATCC64974_98520-T1|organism=Aspergillus niger N402|type=CDS|length=1638bp|location=Sequence derived from alignment at OGUI01000017.1:838988..839895- (Aspergillus niger N402)
TGGCCTGATATGCGCCCCCGTCACCCCCGAAATAGCCACCCGCCTCGCCC
TCCCTCAAATGGTCACCGAGAACGCTGATCCTAAGGGAACCGCGTACACC
GTCTCCGTCGACGCAGCTGACCCCTCTATAACAACTGGTATCTCGGCACA
AGACCGCGCTCTTGCCTGTAGGATCCTGGGATCGCCGACATCCACGGCAG
CGGATCTGCGCCGACCCGGTCATGTAATTCCGCTACAGGCCAGACCCGGA
GGTGTCAGGGAACGCACGGGACATACAGAGGCGGCAGTGGAGTTCTGTCG
GTTGGCGGGCAAGACGCAGGCGGGTGTCATCGCGGAACTTGTGGAGGATG
GAGAGGTCGTACCGGGAGTTCCAGAAATTGGGGGTAACAATGGGATGATG
AGACGGGATGGATGCTTGAGGTTTGGAAAGAAGTGGGGGATCAAGGTATG
TACGATTGAGGATTTGGTGGAGTATGTTGAGAGGGTGGAGGGTGCTGGCG
CTGTGAATGGGAACTGAATGCATTCCCCTTTGGATCCAACCCTTCAATTC
GACTCTATTGAGGACACAATAGCGGCCTTTAGTGAGTCCCCCAGCTCCAG
AACTTCCCACCCGCGCCGGCGCGGGAGGCAAATCCATCCCACCACATTCA
TTACACATACAAACAACATCCATGTAACTAACAAGCACACCAATGCACCA
GAGAACGGCGAATTCATCATCGTGCTCGATTCCCAAGACCGCGAAAATGA
AGGCGATCTCATCATTGCCGCTGACTCCATCACTCCGGCGCAGATGGCTT
TCCTTGTTCGCCACACAAGTGGCCTGATATGCGCCCCCGTCACCCCCGAA
ATAGCCACCCGCCTCGCCCTCCCTCAAATGGTCACCGAGAACGCTGATCC
TAAGGGAACCGCGTACACCGTCTCCGTCGACGCAGCTGACCCCTCTATAA
CAACTGGTATCTCGGCACAAGACCGCGCTCTTGCCTGTAGGATCCTGGGA
TCGCCGACATCCACGGCAGCGGATCTGCGCCGACCCGGTCATGTAATTCC
GCTACAGGCCAGACCCGGAGGTGTCAGGGAACGCACGGGACATACAGAGG
CGGCAGTGGAGTTCTGTCGGTTGGCGGGCAAGACGCAGGCGGGTGTCATC
GCGGAACTTGTGGAGGATGGAGAGGTCGTACCGGGAGTTCCAGAAATTGG
GGGTAACAATGGGATGATGAGACGGGATGGATGCTTGAGGTTTGGAAAGA
AGTGGGGGATCAAGGTATGTACGATTGAGGATTTGGTGGAGTATGTTGAG
AGGGTGGAGGGTGCTGGCGCTGTGAATGGGAACTGAATGCATTCCCCTTT
GGATCCAACCCTTCAATTCGACTCTATTGAGGACACAATAGCGGCCTTTA
GTGAGTCCCCCAGCTCCAGAACTTCCCACCCGCGCCGGCGCGGGAGGCAA
ATCCATCCCACCACATTCATTACACATACAAACAACATCCATGTAACTAA
CAAGCACACCAATGCACCAGAGAACGGCGAATTCATCATCGTGCTCGATT
CCCAAGACCGCGAAAATGAAGGCGATCTCATCATTGCCGCTGACTCCATC
ACTCCGGCGCAGATGGCTTTCCTTGTTCGCCACACAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009231riboflavin biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:00086863,4-dihydroxy-2-butanone-4-phosphate synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_98520ATCC64974_98520Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98520-T1ATCC64974_98520-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98520-T1.cdsATCC64974_98520-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_98520-T1.exon2ATCC64974_98520-T1.exon2Aspergillus niger N402exon
ATCC64974_98520-T1.exon1ATCC64974_98520-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG09263Z8I
DBxrefInterPro:IPR017945
DBxrefInterPro:IPR000422
DBxrefPFAM:PF00926
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:838988..839895 -
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