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Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:905905..906830- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_98720-T1 ID=ATCC64974_98720-T1|Name=ATCC64974_98720-T1|organism=Aspergillus niger N402|type=mRNA|length=926bp|location=Sequence derived from alignment at OGUI01000017.1:905905..906830- (Aspergillus niger N402)
ATGGGTTCCAACATTCATGCTCCAACAGTAGCCTCCGGCCCTACGTCCGG
AGGGGCTCCTCCTCGCGATCTGTCCAAGCTCGGCATGGTCGATCTCATGC
AAGAAAAGGAACGCATCGAAGAAGAACTCTCGGCTCTGAGTAGCGTCCTT
GGCTCGGTGAGTTGAATGGATATTGGTTAAGCCTTGCCACTCTGTGAGAT
GTCGACTGACGATGCTTTCTGTCTAGCATGGCGTTAATATGAACACATCT
CTCACTACTTTCGATGGCTTCCCACGAGACGATATCGATGTTGCCCAAAG
TGAGTCACTACTTTTTGCCTCCGCAGTGCGTCTGCTAAACAGTAGTTAGT
ACGCACCACTCGAGCCCGGATTATTCGACTGCGGAACGATCATAAAGACG
TGATGTCACATCTGGAGAAAGGAATTCACAACCACTTTGCCAATCTGCAG
CGGGCGCAAACTGCCGCACAGTCGGGTGGCGATTTGAATGGCACATTGGG
GTCGCAATCTGGTGTGACTGGGAATAATACCTCCGGCACTGGGGCATCTG
GGTTACCGTTCGCAAAGGTCAATAGTGTGGTGCCTGGAAGTCCCGCAGAC
CAGGCAGGTCTAAGGGTTGGAGATACCGTTCGGGAGTTCGGGAGTGCCAA
CTGGCTCAACCATGAACGTCTCTCCAGGGTGGCGGAGATAGTGCAGCAAA
GTGAAGGGGTAAGTAGGCGATTTGCTTCCAATCTCTTAGTCCTCTAGTCC
AGGGACATGCACTCGGGAGAATGCTCTAGGCTAACGTCTTCTAGCGCACT
GTGGCGGTCAAAGTCGTGAGGAAAGATCCGAGTTCTTCCAGCAGTATCGA
CTTGTCCCTGCAGCTTGTCCCTCGCCGTGATTGGGGCGGTCGGGGCCTGT
TGGGCTGTCATCTCGTGCCGCTGTAG back to topCoding sequence (CDS) from alignment at OGUI01000017.1:905905..906830- >ATCC64974_98720-T1 ID=ATCC64974_98720-T1|Name=ATCC64974_98720-T1|organism=Aspergillus niger N402|type=CDS|length=2880bp|location=Sequence derived from alignment at OGUI01000017.1:905905..906830- (Aspergillus niger N402)
CGCACTGTGGCGGTCAAAGTCGTGAGGAAAGATCCGAGTTCTTCCAGCAG
TATCGACTTGTCCCTGCAGCTTGTCCCTCGCCGTGATTGGGGCGGTCGGG
GCCTGTTGGGCTGTCATCTCGTGCCGCTGTAGTACGCACCACTCGAGCCC
GGATTATTCGACTGCGGAACGATCATAAAGACGTGATGTCACATCTGGAG
AAAGGAATTCACAACCACTTTGCCAATCTGCAGCGGGCGCAAACTGCCGC
ACAGTCGGGTGGCGATTTGAATGGCACATTGGGGTCGCAATCTGGTGTGA
CTGGGAATAATACCTCCGGCACTGGGGCATCTGGGTTACCGTTCGCAAAG
GTCAATAGTGTGGTGCCTGGAAGTCCCGCAGACCAGGCAGGTCTAAGGGT
TGGAGATACCGTTCGGGAGTTCGGGAGTGCCAACTGGCTCAACCATGAAC
GTCTCTCCAGGGTGGCGGAGATAGTGCAGCAAAGTGAAGGGCATGGCGTT
AATATGAACACATCTCTCACTACTTTCGATGGCTTCCCACGAGACGATAT
CGATGTTGCCCAAAATGGGTTCCAACATTCATGCTCCAACAGTAGCCTCC
GGCCCTACGTCCGGAGGGGCTCCTCCTCGCGATCTGTCCAAGCTCGGCAT
GGTCGATCTCATGCAAGAAAAGGAACGCATCGAAGAAGAACTCTCGGCTC
TGAGTAGCGTCCTTGGCTCGCGCACTGTGGCGGTCAAAGTCGTGAGGAAA
GATCCGAGTTCTTCCAGCAGTATCGACTTGTCCCTGCAGCTTGTCCCTCG
CCGTGATTGGGGCGGTCGGGGCCTGTTGGGCTGTCATCTCGTGCCGCTGT
AGTACGCACCACTCGAGCCCGGATTATTCGACTGCGGAACGATCATAAAG
ACGTGATGTCACATCTGGAGAAAGGAATTCACAACCACTTTGCCAATCTG
CAGCGGGCGCAAACTGCCGCACAGTCGGGTGGCGATTTGAATGGCACATT
GGGGTCGCAATCTGGTGTGACTGGGAATAATACCTCCGGCACTGGGGCAT
CTGGGTTACCGTTCGCAAAGGTCAATAGTGTGGTGCCTGGAAGTCCCGCA
GACCAGGCAGGTCTAAGGGTTGGAGATACCGTTCGGGAGTTCGGGAGTGC
CAACTGGCTCAACCATGAACGTCTCTCCAGGGTGGCGGAGATAGTGCAGC
AAAGTGAAGGGCATGGCGTTAATATGAACACATCTCTCACTACTTTCGAT
GGCTTCCCACGAGACGATATCGATGTTGCCCAAAATGGGTTCCAACATTC
ATGCTCCAACAGTAGCCTCCGGCCCTACGTCCGGAGGGGCTCCTCCTCGC
GATCTGTCCAAGCTCGGCATGGTCGATCTCATGCAAGAAAAGGAACGCAT
CGAAGAAGAACTCTCGGCTCTGAGTAGCGTCCTTGGCTCGCGCACTGTGG
CGGTCAAAGTCGTGAGGAAAGATCCGAGTTCTTCCAGCAGTATCGACTTG
TCCCTGCAGCTTGTCCCTCGCCGTGATTGGGGCGGTCGGGGCCTGTTGGG
CTGTCATCTCGTGCCGCTGTAGTACGCACCACTCGAGCCCGGATTATTCG
ACTGCGGAACGATCATAAAGACGTGATGTCACATCTGGAGAAAGGAATTC
ACAACCACTTTGCCAATCTGCAGCGGGCGCAAACTGCCGCACAGTCGGGT
GGCGATTTGAATGGCACATTGGGGTCGCAATCTGGTGTGACTGGGAATAA
TACCTCCGGCACTGGGGCATCTGGGTTACCGTTCGCAAAGGTCAATAGTG
TGGTGCCTGGAAGTCCCGCAGACCAGGCAGGTCTAAGGGTTGGAGATACC
GTTCGGGAGTTCGGGAGTGCCAACTGGCTCAACCATGAACGTCTCTCCAG
GGTGGCGGAGATAGTGCAGCAAAGTGAAGGGCATGGCGTTAATATGAACA
CATCTCTCACTACTTTCGATGGCTTCCCACGAGACGATATCGATGTTGCC
CAAAATGGGTTCCAACATTCATGCTCCAACAGTAGCCTCCGGCCCTACGT
CCGGAGGGGCTCCTCCTCGCGATCTGTCCAAGCTCGGCATGGTCGATCTC
ATGCAAGAAAAGGAACGCATCGAAGAAGAACTCTCGGCTCTGAGTAGCGT
CCTTGGCTCGCGCACTGTGGCGGTCAAAGTCGTGAGGAAAGATCCGAGTT
CTTCCAGCAGTATCGACTTGTCCCTGCAGCTTGTCCCTCGCCGTGATTGG
GGCGGTCGGGGCCTGTTGGGCTGTCATCTCGTGCCGCTGTAGTACGCACC
ACTCGAGCCCGGATTATTCGACTGCGGAACGATCATAAAGACGTGATGTC
ACATCTGGAGAAAGGAATTCACAACCACTTTGCCAATCTGCAGCGGGCGC
AAACTGCCGCACAGTCGGGTGGCGATTTGAATGGCACATTGGGGTCGCAA
TCTGGTGTGACTGGGAATAATACCTCCGGCACTGGGGCATCTGGGTTACC
GTTCGCAAAGGTCAATAGTGTGGTGCCTGGAAGTCCCGCAGACCAGGCAG
GTCTAAGGGTTGGAGATACCGTTCGGGAGTTCGGGAGTGCCAACTGGCTC
AACCATGAACGTCTCTCCAGGGTGGCGGAGATAGTGCAGCAAAGTGAAGG
GCATGGCGTTAATATGAACACATCTCTCACTACTTTCGATGGCTTCCCAC
GAGACGATATCGATGTTGCCCAAAATGGGTTCCAACATTCATGCTCCAAC
AGTAGCCTCCGGCCCTACGTCCGGAGGGGCTCCTCCTCGCGATCTGTCCA
AGCTCGGCATGGTCGATCTCATGCAAGAAAAGGAACGCATCGAAGAAGAA
CTCTCGGCTCTGAGTAGCGTCCTTGGCTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_98720-T1 | ATCC64974_98720-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036034 |
| DBxref | InterPro:IPR041489 |
| DBxref | InterPro:IPR040815 |
| DBxref | InterPro:IPR001478 |
| DBxref | PFAM:PF17820 |
| DBxref | PFAM:PF13180 |
| DBxref | PFAM:PF00595 |
| DBxref | PFAM:PF18265 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:905905..906830 - |
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