|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at OGUI01000017.1:1102605..1104768- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC64974_99330-T1 ID=ATCC64974_99330-T1|Name=ATCC64974_99330-T1|organism=Aspergillus niger N402|type=mRNA|length=2164bp|location=Sequence derived from alignment at OGUI01000017.1:1102605..1104768- (Aspergillus niger N402)
ATGGAGCAAGCGAAAGCATATGAGGCATCCTCATCGCACAGTCCCTCCTC
GTCGTCTCCGGACTCCTTCTCGTCTACATCGACAACGCAACCGACACCAG
CAGCCAACACTTCCGCCCCTCCCCACAATCCGCGATCGGAGGAAGATGCC
CTCATCCTGGATAACGGAGTCCCCCACTTTGTTTCCGGCAAACACTGGGC
CTGGATGGCAGCAGAGGTGCGCTTCACAGCATGCGGCTCGCGTGAATAAC
AGGAGTGAGAGCACAGAATGCTAACATAGTCTCACTGTTTCCTTTTCCCT
CTTTATAGCTCCAAGACATCCAATCAGTTCTCACGGAATCTCAAAAGTCC
TCTTCTCCGGAAGGGACACTTGACGATGTTATTTGGGAGGCCGATTCACC
TGCCAAGGCATCATTTAGTAACATTAGCAACAACTTCTGGCCTGATACCC
GGGAAGATTGTTACTTGCTGTTGAATGTGTACCTGGCCAATGTCGACCCG
ATAGTTCGCATTATCCACCGGCCAAGCTTGGCCCGTCGCTTTGACGCCTT
CGTGCGCTCTCAATATCCTGACAGTCGAGATTACACACCGACCCAAGGGG
GAGACAGCAACGGCGGTACGAGCTGCGGTCCGACAAAGATTGACGCCTTC
CAACCACTGGTCATGTCTATCTTCTACGCGGCTGTCAACAGTATAAAGGA
TACAGACGTAGCCACCATGTTCGGTATGGACAAAGTCTCTCTTCTGAATC
GGTATCGGATGGGAACAGAGATGCTTCTCAAGCGCCAAAAATTTATGACC
TCGAGGATCTTTGAGGTTCTGCAGGCATTTGTGATATTATTGGTAAGGAA
CCCATAAAGAAATTCAAAAACCAATCGCTATTCTAATCTTAATTCATGGC
TATAGACTGCGCAATACAGAGAAGATGACATGGGCAAAGTGTGGCCATTG
ACAGGCCTGGCCATTCGGATTGCAATGCTTCAGGGACTCCACAGGGACCC
CCTAGCCCTACCACTCGGAACGATCGACGTCGTACAGGTGGAGCTGCGCC
GTCGCCTGTGGGCTCAGATCTGCTATTTGGATTTCCGGACTGCGGAAGAT
CACGGATTCGCGCCGTCAATCCACGCATCGGACTTCGATACGCGTCGGCC
CGTCAGTCTGGACGATGTGGATCTGATTGAAGGCGTGGCCCCCTTGGCCG
GGCTCTCTGATGCCTCTAAATTCACCGATATGACCATCTACCTTCTGCGC
ATCACAGCCGCCGGTTACTACGGGCACATCATCCAGATAACGCATGCATC
ACGCAAGCGATTGCGTAACGGCTTGAATGGTTCGGTTATTGACGAGTCCC
AATCTTTGGTGAAGCTACAAGAACTGTTGCAGACCGCCACTGGGCTTGCA
GGTGAGTTAGAGAGGGGCCTCGACGAGCTGGTTCGGTACTGCGATAAGAG
GGTGGTTATGCAATCGATGGCTTTGGATCTTAGCCAGCACCTCAAGACTA
AATTCTGGGTTATGTTCTGGATGCAGATCCCACGACAGAATCGCGAGAAA
ATCATAAGTCCTGCTATGAGACGAAAGTGAGCCTCCTCTCCTTCTGCCTC
CACTTTCCTATAGCCGGAAGGTGTTGCATGTCTGTCCACTTCGAGAAGAA
GAGCATAGTAGGAGATTGGTTCGAGAAGAATTAACAAACTTATTTTGATA
GCATATTCGTCGACGCTGCGACCGCCGTAGAAACTTGGTGCACCATTTCT
TCGAGCCCGGCCTGCGAACCCTATCAATGGCACATAACCTCACACGCCGG
CTTTAACCTCATTCTCTACGTTCTCTCTGAGCTTCGCAGTCCCGAATTTC
GGAAGCCTGGATGGGAGGATCTTCGCCAGCGTGGGCTTCAACTCGCCAAT
GCCATCTACGACCTGCGCGGCCATCATACCACGGGCGCCTGGCCTGCAAT
CATGTGGCTGGTAAATCGTATTCGATTCCAGCAGGATCCGGCTGAAGATT
CAAGGCCTCTGATGGCTGCTGGCGCTGTTGTCGGCGGTAATGGTGGTACT
GGGCCTGGTGGTCCGTCGGATACCCAGCCCTCGATTATGAGACCGGCTGG
TCCTGCCGGTGCTGGAGGTGTTGATGATGCTCCGCCAGTGGGCCCGGCAG
GGGTTGGAATTTGA back to topCoding sequence (CDS) from alignment at OGUI01000017.1:1102605..1104768- >ATCC64974_99330-T1 ID=ATCC64974_99330-T1|Name=ATCC64974_99330-T1|organism=Aspergillus niger N402|type=CDS|length=7536bp|location=Sequence derived from alignment at OGUI01000017.1:1102605..1104768- (Aspergillus niger N402)
CATATTCGTCGACGCTGCGACCGCCGTAGAAACTTGGTGCACCATTTCTT
CGAGCCCGGCCTGCGAACCCTATCAATGGCACATAACCTCACACGCCGGC
TTTAACCTCATTCTCTACGTTCTCTCTGAGCTTCGCAGTCCCGAATTTCG
GAAGCCTGGATGGGAGGATCTTCGCCAGCGTGGGCTTCAACTCGCCAATG
CCATCTACGACCTGCGCGGCCATCATACCACGGGCGCCTGGCCTGCAATC
ATGTGGCTGGTAAATCGTATTCGATTCCAGCAGGATCCGGCTGAAGATTC
AAGGCCTCTGATGGCTGCTGGCGCTGTTGTCGGCGGTAATGGTGGTACTG
GGCCTGGTGGTCCGTCGGATACCCAGCCCTCGATTATGAGACCGGCTGGT
CCTGCCGGTGCTGGAGGTGTTGATGATGCTCCGCCAGTGGGCCCGGCAGG
GGTTGGAATTTGAACTGCGCAATACAGAGAAGATGACATGGGCAAAGTGT
GGCCATTGACAGGCCTGGCCATTCGGATTGCAATGCTTCAGGGACTCCAC
AGGGACCCCCTAGCCCTACCACTCGGAACGATCGACGTCGTACAGGTGGA
GCTGCGCCGTCGCCTGTGGGCTCAGATCTGCTATTTGGATTTCCGGACTG
CGGAAGATCACGGATTCGCGCCGTCAATCCACGCATCGGACTTCGATACG
CGTCGGCCCGTCAGTCTGGACGATGTGGATCTGATTGAAGGCGTGGCCCC
CTTGGCCGGGCTCTCTGATGCCTCTAAATTCACCGATATGACCATCTACC
TTCTGCGCATCACAGCCGCCGGTTACTACGGGCACATCATCCAGATAACG
CATGCATCACGCAAGCGATTGCGTAACGGCTTGAATGGTTCGGTTATTGA
CGAGTCCCAATCTTTGGTGAAGCTACAAGAACTGTTGCAGACCGCCACTG
GGCTTGCAGGTGAGTTAGAGAGGGGCCTCGACGAGCTGGTTCGGTACTGC
GATAAGAGGGTGGTTATGCAATCGATGGCTTTGGATCTTAGCCAGCACCT
CAAGACTAAATTCTGGGTTATGTTCTGGATGCAGATCCCACGACAGAATC
GCGAGAAAATCATAAGTCCTGCTATGAGACGAAACTCCAAGACATCCAAT
CAGTTCTCACGGAATCTCAAAAGTCCTCTTCTCCGGAAGGGACACTTGAC
GATGTTATTTGGGAGGCCGATTCACCTGCCAAGGCATCATTTAGTAACAT
TAGCAACAACTTCTGGCCTGATACCCGGGAAGATTGTTACTTGCTGTTGA
ATGTGTACCTGGCCAATGTCGACCCGATAGTTCGCATTATCCACCGGCCA
AGCTTGGCCCGTCGCTTTGACGCCTTCGTGCGCTCTCAATATCCTGACAG
TCGAGATTACACACCGACCCAAGGGGGAGACAGCAACGGCGGTACGAGCT
GCGGTCCGACAAAGATTGACGCCTTCCAACCACTGGTCATGTCTATCTTC
TACGCGGCTGTCAACAGTATAAAGGATACAGACGTAGCCACCATGTTCGG
TATGGACAAAGTCTCTCTTCTGAATCGGTATCGGATGGGAACAGAGATGC
TTCTCAAGCGCCAAAAATTTATGACCTCGAGGATCTTTGAGGTTCTGCAG
GCATTTGTGATATTATTGATGGAGCAAGCGAAAGCATATGAGGCATCCTC
ATCGCACAGTCCCTCCTCGTCGTCTCCGGACTCCTTCTCGTCTACATCGA
CAACGCAACCGACACCAGCAGCCAACACTTCCGCCCCTCCCCACAATCCG
CGATCGGAGGAAGATGCCCTCATCCTGGATAACGGAGTCCCCCACTTTGT
TTCCGGCAAACACTGGGCCTGGATGGCAGCAGAGCATATTCGTCGACGCT
GCGACCGCCGTAGAAACTTGGTGCACCATTTCTTCGAGCCCGGCCTGCGA
ACCCTATCAATGGCACATAACCTCACACGCCGGCTTTAACCTCATTCTCT
ACGTTCTCTCTGAGCTTCGCAGTCCCGAATTTCGGAAGCCTGGATGGGAG
GATCTTCGCCAGCGTGGGCTTCAACTCGCCAATGCCATCTACGACCTGCG
CGGCCATCATACCACGGGCGCCTGGCCTGCAATCATGTGGCTGGTAAATC
GTATTCGATTCCAGCAGGATCCGGCTGAAGATTCAAGGCCTCTGATGGCT
GCTGGCGCTGTTGTCGGCGGTAATGGTGGTACTGGGCCTGGTGGTCCGTC
GGATACCCAGCCCTCGATTATGAGACCGGCTGGTCCTGCCGGTGCTGGAG
GTGTTGATGATGCTCCGCCAGTGGGCCCGGCAGGGGTTGGAATTTGAACT
GCGCAATACAGAGAAGATGACATGGGCAAAGTGTGGCCATTGACAGGCCT
GGCCATTCGGATTGCAATGCTTCAGGGACTCCACAGGGACCCCCTAGCCC
TACCACTCGGAACGATCGACGTCGTACAGGTGGAGCTGCGCCGTCGCCTG
TGGGCTCAGATCTGCTATTTGGATTTCCGGACTGCGGAAGATCACGGATT
CGCGCCGTCAATCCACGCATCGGACTTCGATACGCGTCGGCCCGTCAGTC
TGGACGATGTGGATCTGATTGAAGGCGTGGCCCCCTTGGCCGGGCTCTCT
GATGCCTCTAAATTCACCGATATGACCATCTACCTTCTGCGCATCACAGC
CGCCGGTTACTACGGGCACATCATCCAGATAACGCATGCATCACGCAAGC
GATTGCGTAACGGCTTGAATGGTTCGGTTATTGACGAGTCCCAATCTTTG
GTGAAGCTACAAGAACTGTTGCAGACCGCCACTGGGCTTGCAGGTGAGTT
AGAGAGGGGCCTCGACGAGCTGGTTCGGTACTGCGATAAGAGGGTGGTTA
TGCAATCGATGGCTTTGGATCTTAGCCAGCACCTCAAGACTAAATTCTGG
GTTATGTTCTGGATGCAGATCCCACGACAGAATCGCGAGAAAATCATAAG
TCCTGCTATGAGACGAAACTCCAAGACATCCAATCAGTTCTCACGGAATC
TCAAAAGTCCTCTTCTCCGGAAGGGACACTTGACGATGTTATTTGGGAGG
CCGATTCACCTGCCAAGGCATCATTTAGTAACATTAGCAACAACTTCTGG
CCTGATACCCGGGAAGATTGTTACTTGCTGTTGAATGTGTACCTGGCCAA
TGTCGACCCGATAGTTCGCATTATCCACCGGCCAAGCTTGGCCCGTCGCT
TTGACGCCTTCGTGCGCTCTCAATATCCTGACAGTCGAGATTACACACCG
ACCCAAGGGGGAGACAGCAACGGCGGTACGAGCTGCGGTCCGACAAAGAT
TGACGCCTTCCAACCACTGGTCATGTCTATCTTCTACGCGGCTGTCAACA
GTATAAAGGATACAGACGTAGCCACCATGTTCGGTATGGACAAAGTCTCT
CTTCTGAATCGGTATCGGATGGGAACAGAGATGCTTCTCAAGCGCCAAAA
ATTTATGACCTCGAGGATCTTTGAGGTTCTGCAGGCATTTGTGATATTAT
TGATGGAGCAAGCGAAAGCATATGAGGCATCCTCATCGCACAGTCCCTCC
TCGTCGTCTCCGGACTCCTTCTCGTCTACATCGACAACGCAACCGACACC
AGCAGCCAACACTTCCGCCCCTCCCCACAATCCGCGATCGGAGGAAGATG
CCCTCATCCTGGATAACGGAGTCCCCCACTTTGTTTCCGGCAAACACTGG
GCCTGGATGGCAGCAGAGCATATTCGTCGACGCTGCGACCGCCGTAGAAA
CTTGGTGCACCATTTCTTCGAGCCCGGCCTGCGAACCCTATCAATGGCAC
ATAACCTCACACGCCGGCTTTAACCTCATTCTCTACGTTCTCTCTGAGCT
TCGCAGTCCCGAATTTCGGAAGCCTGGATGGGAGGATCTTCGCCAGCGTG
GGCTTCAACTCGCCAATGCCATCTACGACCTGCGCGGCCATCATACCACG
GGCGCCTGGCCTGCAATCATGTGGCTGGTAAATCGTATTCGATTCCAGCA
GGATCCGGCTGAAGATTCAAGGCCTCTGATGGCTGCTGGCGCTGTTGTCG
GCGGTAATGGTGGTACTGGGCCTGGTGGTCCGTCGGATACCCAGCCCTCG
ATTATGAGACCGGCTGGTCCTGCCGGTGCTGGAGGTGTTGATGATGCTCC
GCCAGTGGGCCCGGCAGGGGTTGGAATTTGAACTGCGCAATACAGAGAAG
ATGACATGGGCAAAGTGTGGCCATTGACAGGCCTGGCCATTCGGATTGCA
ATGCTTCAGGGACTCCACAGGGACCCCCTAGCCCTACCACTCGGAACGAT
CGACGTCGTACAGGTGGAGCTGCGCCGTCGCCTGTGGGCTCAGATCTGCT
ATTTGGATTTCCGGACTGCGGAAGATCACGGATTCGCGCCGTCAATCCAC
GCATCGGACTTCGATACGCGTCGGCCCGTCAGTCTGGACGATGTGGATCT
GATTGAAGGCGTGGCCCCCTTGGCCGGGCTCTCTGATGCCTCTAAATTCA
CCGATATGACCATCTACCTTCTGCGCATCACAGCCGCCGGTTACTACGGG
CACATCATCCAGATAACGCATGCATCACGCAAGCGATTGCGTAACGGCTT
GAATGGTTCGGTTATTGACGAGTCCCAATCTTTGGTGAAGCTACAAGAAC
TGTTGCAGACCGCCACTGGGCTTGCAGGTGAGTTAGAGAGGGGCCTCGAC
GAGCTGGTTCGGTACTGCGATAAGAGGGTGGTTATGCAATCGATGGCTTT
GGATCTTAGCCAGCACCTCAAGACTAAATTCTGGGTTATGTTCTGGATGC
AGATCCCACGACAGAATCGCGAGAAAATCATAAGTCCTGCTATGAGACGA
AACTCCAAGACATCCAATCAGTTCTCACGGAATCTCAAAAGTCCTCTTCT
CCGGAAGGGACACTTGACGATGTTATTTGGGAGGCCGATTCACCTGCCAA
GGCATCATTTAGTAACATTAGCAACAACTTCTGGCCTGATACCCGGGAAG
ATTGTTACTTGCTGTTGAATGTGTACCTGGCCAATGTCGACCCGATAGTT
CGCATTATCCACCGGCCAAGCTTGGCCCGTCGCTTTGACGCCTTCGTGCG
CTCTCAATATCCTGACAGTCGAGATTACACACCGACCCAAGGGGGAGACA
GCAACGGCGGTACGAGCTGCGGTCCGACAAAGATTGACGCCTTCCAACCA
CTGGTCATGTCTATCTTCTACGCGGCTGTCAACAGTATAAAGGATACAGA
CGTAGCCACCATGTTCGGTATGGACAAAGTCTCTCTTCTGAATCGGTATC
GGATGGGAACAGAGATGCTTCTCAAGCGCCAAAAATTTATGACCTCGAGG
ATCTTTGAGGTTCTGCAGGCATTTGTGATATTATTGATGGAGCAAGCGAA
AGCATATGAGGCATCCTCATCGCACAGTCCCTCCTCGTCGTCTCCGGACT
CCTTCTCGTCTACATCGACAACGCAACCGACACCAGCAGCCAACACTTCC
GCCCCTCCCCACAATCCGCGATCGGAGGAAGATGCCCTCATCCTGGATAA
CGGAGTCCCCCACTTTGTTTCCGGCAAACACTGGGCCTGGATGGCAGCAG
AGCATATTCGTCGACGCTGCGACCGCCGTAGAAACTTGGTGCACCATTTC
TTCGAGCCCGGCCTGCGAACCCTATCAATGGCACATAACCTCACACGCCG
GCTTTAACCTCATTCTCTACGTTCTCTCTGAGCTTCGCAGTCCCGAATTT
CGGAAGCCTGGATGGGAGGATCTTCGCCAGCGTGGGCTTCAACTCGCCAA
TGCCATCTACGACCTGCGCGGCCATCATACCACGGGCGCCTGGCCTGCAA
TCATGTGGCTGGTAAATCGTATTCGATTCCAGCAGGATCCGGCTGAAGAT
TCAAGGCCTCTGATGGCTGCTGGCGCTGTTGTCGGCGGTAATGGTGGTAC
TGGGCCTGGTGGTCCGTCGGATACCCAGCCCTCGATTATGAGACCGGCTG
GTCCTGCCGGTGCTGGAGGTGTTGATGATGCTCCGCCAGTGGGCCCGGCA
GGGGTTGGAATTTGAACTGCGCAATACAGAGAAGATGACATGGGCAAAGT
GTGGCCATTGACAGGCCTGGCCATTCGGATTGCAATGCTTCAGGGACTCC
ACAGGGACCCCCTAGCCCTACCACTCGGAACGATCGACGTCGTACAGGTG
GAGCTGCGCCGTCGCCTGTGGGCTCAGATCTGCTATTTGGATTTCCGGAC
TGCGGAAGATCACGGATTCGCGCCGTCAATCCACGCATCGGACTTCGATA
CGCGTCGGCCCGTCAGTCTGGACGATGTGGATCTGATTGAAGGCGTGGCC
CCCTTGGCCGGGCTCTCTGATGCCTCTAAATTCACCGATATGACCATCTA
CCTTCTGCGCATCACAGCCGCCGGTTACTACGGGCACATCATCCAGATAA
CGCATGCATCACGCAAGCGATTGCGTAACGGCTTGAATGGTTCGGTTATT
GACGAGTCCCAATCTTTGGTGAAGCTACAAGAACTGTTGCAGACCGCCAC
TGGGCTTGCAGGTGAGTTAGAGAGGGGCCTCGACGAGCTGGTTCGGTACT
GCGATAAGAGGGTGGTTATGCAATCGATGGCTTTGGATCTTAGCCAGCAC
CTCAAGACTAAATTCTGGGTTATGTTCTGGATGCAGATCCCACGACAGAA
TCGCGAGAAAATCATAAGTCCTGCTATGAGACGAAACTCCAAGACATCCA
ATCAGTTCTCACGGAATCTCAAAAGTCCTCTTCTCCGGAAGGGACACTTG
ACGATGTTATTTGGGAGGCCGATTCACCTGCCAAGGCATCATTTAGTAAC
ATTAGCAACAACTTCTGGCCTGATACCCGGGAAGATTGTTACTTGCTGTT
GAATGTGTACCTGGCCAATGTCGACCCGATAGTTCGCATTATCCACCGGC
CAAGCTTGGCCCGTCGCTTTGACGCCTTCGTGCGCTCTCAATATCCTGAC
AGTCGAGATTACACACCGACCCAAGGGGGAGACAGCAACGGCGGTACGAG
CTGCGGTCCGACAAAGATTGACGCCTTCCAACCACTGGTCATGTCTATCT
TCTACGCGGCTGTCAACAGTATAAAGGATACAGACGTAGCCACCATGTTC
GGTATGGACAAAGTCTCTCTTCTGAATCGGTATCGGATGGGAACAGAGAT
GCTTCTCAAGCGCCAAAAATTTATGACCTCGAGGATCTTTGAGGTTCTGC
AGGCATTTGTGATATTATTGATGGAGCAAGCGAAAGCATATGAGGCATCC
TCATCGCACAGTCCCTCCTCGTCGTCTCCGGACTCCTTCTCGTCTACATC
GACAACGCAACCGACACCAGCAGCCAACACTTCCGCCCCTCCCCACAATC
CGCGATCGGAGGAAGATGCCCTCATCCTGGATAACGGAGTCCCCCACTTT
GTTTCCGGCAAACACTGGGCCTGGATGGCAGCAGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ATCC64974_99330-T1 | ATCC64974_99330-T1-protein | Aspergillus niger N402 | polypeptide |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000171.4 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| OGUI01000017.1 | supercontig | OGUI01000017.1:1102605..1104768 - |
|
