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ATCC64974_99650-T1, ATCC64974_99650-T1 (mRNA) Aspergillus niger N402

Overview
NameATCC64974_99650-T1
Unique NameATCC64974_99650-T1
TypemRNA
OrganismAspergillus niger N402
Sequences
The following sequences are available for this feature:

mRNA from alignment at OGUI01000017.1:1207699..1208891-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC64974_99650-T1 ID=ATCC64974_99650-T1|Name=ATCC64974_99650-T1|organism=Aspergillus niger N402|type=mRNA|length=1193bp|location=Sequence derived from alignment at OGUI01000017.1:1207699..1208891- (Aspergillus niger N402)
ATGCCCATCAACCAACCATCAAATCAGATTAAATTTACCAACGTATCAGT
CGTCAGGCTAAAAAAGGGTACGTATTGATATGCATGTGTGGCCCTTCATT
TGCGATCGTCTTGCGTGGCATGTCTGTCAATAATGTGGGGAGATCATGCG
CAAATTCAGCGTAGAAAGAAAAACTGCCTGCGAAACTTCCAGTCGGCCCC
GCAACCCCGCTAACCGTTTCACCAACAGGTAAAAAGCGCTTCGAACTCGC
CTGCTACAAGAACAAACTCCTCGAGTACCGCTCCGGAGCAGAGAAGGATC
TCGACAATGTCCTCCAAGTCCCCACGATCTTCCTGTCGGTTTCCAAAGCG
CAAACAGCCCCATCCGCCGAGTTAACAAAGGCCTTCGGCGCCGACACGCC
TGCAGATGAGATCCGGCAAGAAATTCTACGAAAGGGTGAAGTGCAAGTTG
GCGAGCGTGAGCGCAAGGAAATCATCGAGCGCGTGGAGAAGGAGGTGTTG
GATATCGTATCAGGACGGCTTGTTGATCCTACGACGAAGCGAGTCTATAC
CCCCGGAATGATTTCCAAGGCCTTGGACCAGCTCAGCTCGGCTAGTGGTC
AACAGCAGTCGCAAACGTCTGGCAATGGGGAGACTAATGGGGACGACAGC
GAGGAGAGCCGCCCGAGGAAACCGCTCTGGACGGGTGTGACGGCCAACAA
GTCGGCGAAGAGTCAAGCGCTTGAAGCTATGAAGGCGCTTATTGCATGGC
AACCTATCCCTGTGATGCGGGCGCGGATGCGCCTCCGTGTCACCTGTCCT
GTGTCACTGTTGAAGCAGAGTGTTAAGGGTGGTGCGGCCGGTGGTGCTGC
CGCGGGTGGTAAAGAAAAGGAGGCGCCGTCCAAGAGCGGCTCCAAGTCGA
ACAAGAAGGGTGGAAAGGGGTCCAAGAAAGCCCGTCAGCAGGAATCCGAG
GATGAGGCAGGTGGATCTGACGCAGAGTCCGCACCTGCCAAGGGTCCGAG
CAATGTCAAGGATAAGATCCTGAGCTATATCGAATCTATTGAGGCTCAGG
AGGTTGTCGGCGGAGACGAGTGGGAGATCATTGGCTTTGCTGAGCCGGGA
GCTTTCAAGGGATTGAATGAATTTGTGGGCAACGAGACCCGGGGCAGAGG
ACGTGTGGAGGTGCTGGATATGACGGTGACCCATGAAGAGTAA
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Coding sequence (CDS) from alignment at OGUI01000017.1:1207699..1208891-

>ATCC64974_99650-T1 ID=ATCC64974_99650-T1|Name=ATCC64974_99650-T1|organism=Aspergillus niger N402|type=CDS|length=2064bp|location=Sequence derived from alignment at OGUI01000017.1:1207699..1208891- (Aspergillus niger N402)
GTAAAAAGCGCTTCGAACTCGCCTGCTACAAGAACAAACTCCTCGAGTAC
CGCTCCGGAGCAGAGAAGGATCTCGACAATGTCCTCCAAGTCCCCACGAT
CTTCCTGTCGGTTTCCAAAGCGCAAACAGCCCCATCCGCCGAGTTAACAA
AGGCCTTCGGCGCCGACACGCCTGCAGATGAGATCCGGCAAGAAATTCTA
CGAAAGGGTGAAGTGCAAGTTGGCGAGCGTGAGCGCAAGGAAATCATCGA
GCGCGTGGAGAAGGAGGTGTTGGATATCGTATCAGGACGGCTTGTTGATC
CTACGACGAAGCGAGTCTATACCCCCGGAATGATTTCCAAGGCCTTGGAC
CAGCTCAGCTCGGCTAGTGGTCAACAGCAGTCGCAAACGTCTGGCAATGG
GGAGACTAATGGGGACGACAGCGAGGAGAGCCGCCCGAGGAAACCGCTCT
GGACGGGTGTGACGGCCAACAAGTCGGCGAAGAGTCAAGCGCTTGAAGCT
ATGAAGGCGCTTATTGCATGGCAACCTATCCCTGTGATGCGGGCGCGGAT
GCGCCTCCGTGTCACCTGTCCTGTGTCACTGTTGAAGCAGAGTGTTAAGG
GTGGTGCGGCCGGTGGTGCTGCCGCGGGTGGTAAAGAAAAGGAGGCGCCG
TCCAAGAGCGGCTCCAAGTCGAACAAGAAGGGTGGAAAGGGGTCCAAGAA
AGCCCGTCAGCAGGAATCCGAGGATGAGGCAGGTGGATCTGACGCAGAGT
CCGCACCTGCCAAGGGTCCGAGCAATGTCAAGGATAAGATCCTGAGCTAT
ATCGAATCTATTGAGGCTCAGGAGGTTGTCGGCGGAGACGAGTGGGAGAT
CATTGGCTTTGCTGAGCCGGGAGCTTTCAAGGGATTGAATGAATTTGTGG
GCAACGAGACCCGGGGCAGAGGACGTGTGGAGGTGCTGGATATGACGGTG
ACCCATGAAGAGTAAATGCCCATCAACCAACCATCAAATCAGATTAAATT
TACCAACGTATCAGTCGTCAGGCTAAAAAAGGGTAAAAAGCGCTTCGAAC
TCGCCTGCTACAAGAACAAACTCCTCGAGTACCGCTCCGGAGCAGAGAAG
GATCTCGACAATGTCCTCCAAGTCCCCACGATCTTCCTGTCGGTTTCCAA
AGCGCAAACAGCCCCATCCGCCGAGTTAACAAAGGCCTTCGGCGCCGACA
CGCCTGCAGATGAGATCCGGCAAGAAATTCTACGAAAGGGTGAAGTGCAA
GTTGGCGAGCGTGAGCGCAAGGAAATCATCGAGCGCGTGGAGAAGGAGGT
GTTGGATATCGTATCAGGACGGCTTGTTGATCCTACGACGAAGCGAGTCT
ATACCCCCGGAATGATTTCCAAGGCCTTGGACCAGCTCAGCTCGGCTAGT
GGTCAACAGCAGTCGCAAACGTCTGGCAATGGGGAGACTAATGGGGACGA
CAGCGAGGAGAGCCGCCCGAGGAAACCGCTCTGGACGGGTGTGACGGCCA
ACAAGTCGGCGAAGAGTCAAGCGCTTGAAGCTATGAAGGCGCTTATTGCA
TGGCAACCTATCCCTGTGATGCGGGCGCGGATGCGCCTCCGTGTCACCTG
TCCTGTGTCACTGTTGAAGCAGAGTGTTAAGGGTGGTGCGGCCGGTGGTG
CTGCCGCGGGTGGTAAAGAAAAGGAGGCGCCGTCCAAGAGCGGCTCCAAG
TCGAACAAGAAGGGTGGAAAGGGGTCCAAGAAAGCCCGTCAGCAGGAATC
CGAGGATGAGGCAGGTGGATCTGACGCAGAGTCCGCACCTGCCAAGGGTC
CGAGCAATGTCAAGGATAAGATCCTGAGCTATATCGAATCTATTGAGGCT
CAGGAGGTTGTCGGCGGAGACGAGTGGGAGATCATTGGCTTTGCTGAGCC
GGGAGCTTTCAAGGGATTGAATGAATTTGTGGGCAACGAGACCCGGGGCA
GAGGACGTGTGGAGGTGCTGGATATGACGGTGACCCATGAAGAGTAAATG
CCCATCAACCAACCATCAAATCAGATTAAATTTACCAACGTATCAGTCGT
CAGGCTAAAAAAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0042256mature ribosome assembly
GO:0042254ribosome biogenesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC64974_99650ATCC64974_99650Aspergillus niger N402gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_99650-T1ATCC64974_99650-T1-proteinAspergillus niger N402polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_99650-T1.cdsATCC64974_99650-T1.cdsAspergillus niger N402CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC64974_99650-T1.exon2ATCC64974_99650-T1.exon2Aspergillus niger N402exon
ATCC64974_99650-T1.exon1ATCC64974_99650-T1.exon1Aspergillus niger N402exon


Properties
Property NameValue
NoteBUSCO:EOG0926400M
DBxrefInterPro:IPR019783
DBxrefInterPro:IPR036786
DBxrefInterPro:IPR002140
DBxrefInterPro:IPR018978
DBxrefInterPro:IPR037188
DBxrefPFAM:PF09377
DBxrefPFAM:PF01172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger N402 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
OGUI01000017.1supercontigOGUI01000017.1:1207699..1208891 -
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