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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:726775..728493- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_000394-T1 ID=KYF_000394-T1|Name=KYF_000394-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1719bp|location=Sequence derived from alignment at ch1:726775..728493- (Aspergillus niger KYF3)
ATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCCCTGGG
GTGCGACAGCGCTGAGACTCACTCCTGTGCCTCTGCCTTTTCCGTCTCCT
CTGCGGCCGCCGCTAGCTTCTGCGCCACCTTCACGGCGAGCACCGTGACT
GCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTACAAGAC
CAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATGGATCTG
CTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCAAGGTA
GTGAGTTTACCATTTAGATGCATCATCACGCTTTGATTACTGATTCAGTC
TAGGGCAAGGCACCTGCTGTTGCAGCCACTCGCACCTCGGCGATCCCGAC
CACTTTCCACACCACTGCCGTTCGTGTGCCCCTGTCCACCTCGGCAGCGG
CGGCTGTGACCTCCCAGGCTGTCCTCCCGGCGCAGAGCTCCGTGGCAGGC
AACGGAGGCACTACCTGCACAGTGACTGAGTACGCTTCGATCTCCTCTGC
CGTCGCATCCTGCTCCAACATCCTCCTGTCCAACATCAACGCCCCTGCAT
CGAGCACCATCGATCTCACGGGTCTGCAGACCGGTGCGGCTGTCATCTTT
GCTGGTGAAACCGTAAGTCATATCCTTCCTATATTAGGGCCAACCGCCAT
ACTAACGGAGAGTCCGACAGACCTTCGGTGACACCTACGACAGCGACTTC
GACCCCATTGTCATCTCCGGTACCGACGTGACCATCACCGGTGAGGAGGG
ACATGTCATCAACGGTAACGGTGAAGCCTACTGGGACGGCGAGGGATCCA
ACGGCGGACAGGACAAGTACGAGCCTACCACCACAGCCCTTTCATGAAGA
ACCCTACTCATAGCTCCTACCAGGCCCGACCACTTCATTGTCGTCAAGGA
CATGTACAACTCCAAGATCGAGAACCTCAACATCCTGAACTGGCCCGTCC
ACTGCTTCGAGATCGAGAACACCGAGTACCTGACCATCTCCGGCCTGATC
CTCAACAACACCGCCGGTGACGCCGCCAACAGCAAGAGTGACGGCGACCC
GGCCGCCCACAACACCGACGGCTTCGACATCAAGCAGAGCGACTTCCTGA
CCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTGTGTTGCCGTTACC
AGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGCTACGGTGGTCACGG
TCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAACACCGTCGACGGCG
TCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAACGGCTGCCGCATC
AAGTCTAATGCTGATACCACTGGCGAGGTTAGTCCATCCTATCTTAACCA
TCAACATCTTATTATTCTAACCACCGAGCAAATACAGGTCTACAACGTCA
AGTACGAAAACATCACTCTGTCCGGCATCAGCGACTACGGCATCGACATC
CAGCAGGACTACGAGAACGGTGGTGCTACCGGTGACCCGACCAACGGCGT
CAAGATCGAGAACATCTCTTTCGTCAATGTCAAGGGTACTATGAGCGACG
GCAAGGATTACTACATCCTCTGTGGTGATGGCAGCTGCTCTAACTTTGTC
TTCACTGATGTCGACATCACCGGTGGTAGCGATGATAGCTGCAACTACCC
CTCTTCGGGATGCCCTTAA back to topCoding sequence (CDS) from alignment at ch1:726775..728493- >KYF_000394-T1 ID=KYF_000394-T1|Name=KYF_000394-T1|organism=Aspergillus niger KYF3|type=CDS|length=7455bp|location=Sequence derived from alignment at ch1:726775..728493- (Aspergillus niger KYF3)
GTCTACAACGTCAAGTACGAAAACATCACTCTGTCCGGCATCAGCGACTA
CGGCATCGACATCCAGCAGGACTACGAGAACGGTGGTGCTACCGGTGACC
CGACCAACGGCGTCAAGATCGAGAACATCTCTTTCGTCAATGTCAAGGGT
ACTATGAGCGACGGCAAGGATTACTACATCCTCTGTGGTGATGGCAGCTG
CTCTAACTTTGTCTTCACTGATGTCGACATCACCGGTGGTAGCGATGATA
GCTGCAACTACCCCTCTTCGGGATGCCCTTAAGCCCGACCACTTCATTGT
CGTCAAGGACATGTACAACTCCAAGATCGAGAACCTCAACATCCTGAACT
GGCCCGTCCACTGCTTCGAGATCGAGAACACCGAGTACCTGACCATCTCC
GGCCTGATCCTCAACAACACCGCCGGTGACGCCGCCAACAGCAAGAGTGA
CGGCGACCCGGCCGCCCACAACACCGACGGCTTCGACATCAAGCAGAGCG
ACTTCCTGACCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTGTGTT
GCCGTTACCAGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGCTACGG
TGGTCACGGTCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAACACCG
TCGACGGCGTCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAACGGC
TGCCGCATCAAGTCTAATGCTGATACCACTGGCGAGACCTTCGGTGACAC
CTACGACAGCGACTTCGACCCCATTGTCATCTCCGGTACCGACGTGACCA
TCACCGGTGAGGAGGGACATGTCATCAACGGTAACGGTGAAGCCTACTGG
GACGGCGAGGGATCCAACGGCGGACAGGACAAGGCAAGGCACCTGCTGTT
GCAGCCACTCGCACCTCGGCGATCCCGACCACTTTCCACACCACTGCCGT
TCGTGTGCCCCTGTCCACCTCGGCAGCGGCGGCTGTGACCTCCCAGGCTG
TCCTCCCGGCGCAGAGCTCCGTGGCAGGCAACGGAGGCACTACCTGCACA
GTGACTGAGTACGCTTCGATCTCCTCTGCCGTCGCATCCTGCTCCAACAT
CCTCCTGTCCAACATCAACGCCCCTGCATCGAGCACCATCGATCTCACGG
GTCTGCAGACCGGTGCGGCTGTCATCTTTGCTGGTGAAACCATGATGAAG
CGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCCCTGGGGTGCGACAG
CGCTGAGACTCACTCCTGTGCCTCTGCCTTTTCCGTCTCCTCTGCGGCCG
CCGCTAGCTTCTGCGCCACCTTCACGGCGAGCACCGTGACTGCCACGACT
GGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTACAAGACCAAGCACCT
CTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATGGATCTGCTCCTGCTT
CCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCAAGGTAGTCTACAAC
GTCAAGTACGAAAACATCACTCTGTCCGGCATCAGCGACTACGGCATCGA
CATCCAGCAGGACTACGAGAACGGTGGTGCTACCGGTGACCCGACCAACG
GCGTCAAGATCGAGAACATCTCTTTCGTCAATGTCAAGGGTACTATGAGC
GACGGCAAGGATTACTACATCCTCTGTGGTGATGGCAGCTGCTCTAACTT
TGTCTTCACTGATGTCGACATCACCGGTGGTAGCGATGATAGCTGCAACT
ACCCCTCTTCGGGATGCCCTTAAGCCCGACCACTTCATTGTCGTCAAGGA
CATGTACAACTCCAAGATCGAGAACCTCAACATCCTGAACTGGCCCGTCC
ACTGCTTCGAGATCGAGAACACCGAGTACCTGACCATCTCCGGCCTGATC
CTCAACAACACCGCCGGTGACGCCGCCAACAGCAAGAGTGACGGCGACCC
GGCCGCCCACAACACCGACGGCTTCGACATCAAGCAGAGCGACTTCCTGA
CCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTGTGTTGCCGTTACC
AGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGCTACGGTGGTCACGG
TCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAACACCGTCGACGGCG
TCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAACGGCTGCCGCATC
AAGTCTAATGCTGATACCACTGGCGAGACCTTCGGTGACACCTACGACAG
CGACTTCGACCCCATTGTCATCTCCGGTACCGACGTGACCATCACCGGTG
AGGAGGGACATGTCATCAACGGTAACGGTGAAGCCTACTGGGACGGCGAG
GGATCCAACGGCGGACAGGACAAGGCAAGGCACCTGCTGTTGCAGCCACT
CGCACCTCGGCGATCCCGACCACTTTCCACACCACTGCCGTTCGTGTGCC
CCTGTCCACCTCGGCAGCGGCGGCTGTGACCTCCCAGGCTGTCCTCCCGG
CGCAGAGCTCCGTGGCAGGCAACGGAGGCACTACCTGCACAGTGACTGAG
TACGCTTCGATCTCCTCTGCCGTCGCATCCTGCTCCAACATCCTCCTGTC
CAACATCAACGCCCCTGCATCGAGCACCATCGATCTCACGGGTCTGCAGA
CCGGTGCGGCTGTCATCTTTGCTGGTGAAACCATGATGAAGCGCAGCGCG
CTCCTTGCCTCTTTCCTTCCTCTCGCCCTGGGGTGCGACAGCGCTGAGAC
TCACTCCTGTGCCTCTGCCTTTTCCGTCTCCTCTGCGGCCGCCGCTAGCT
TCTGCGCCACCTTCACGGCGAGCACCGTGACTGCCACGACTGGCGTGCCG
GATGTCTTCCTTTCCAACTGTGACTACAAGACCAAGCACCTCTCCAGTGC
CTGCAGCTGCCTGGGCACCGCCGATGGATCTGCTCCTGCTTCCACCCCGG
CTGCCCCGGCAGTCTCCAGCAGCAGCAAGGTAGTCTACAACGTCAAGTAC
GAAAACATCACTCTGTCCGGCATCAGCGACTACGGCATCGACATCCAGCA
GGACTACGAGAACGGTGGTGCTACCGGTGACCCGACCAACGGCGTCAAGA
TCGAGAACATCTCTTTCGTCAATGTCAAGGGTACTATGAGCGACGGCAAG
GATTACTACATCCTCTGTGGTGATGGCAGCTGCTCTAACTTTGTCTTCAC
TGATGTCGACATCACCGGTGGTAGCGATGATAGCTGCAACTACCCCTCTT
CGGGATGCCCTTAAGCCCGACCACTTCATTGTCGTCAAGGACATGTACAA
CTCCAAGATCGAGAACCTCAACATCCTGAACTGGCCCGTCCACTGCTTCG
AGATCGAGAACACCGAGTACCTGACCATCTCCGGCCTGATCCTCAACAAC
ACCGCCGGTGACGCCGCCAACAGCAAGAGTGACGGCGACCCGGCCGCCCA
CAACACCGACGGCTTCGACATCAAGCAGAGCGACTTCCTGACCCTCTCCA
ACTCCTGGGTGCACAACCAGGACGACTGTGTTGCCGTTACCAGCGGTAGC
TCGATCGTCGTCGACAACCTCTACTGCTACGGTGGTCACGGTCTCTCCAT
CGGCTCCATCGGCGGCAAGAGCAACAACACCGTCGACGGCGTCACCTTCT
CCAACTCCCAGGTCATTAACAGCGAGAACGGCTGCCGCATCAAGTCTAAT
GCTGATACCACTGGCGAGACCTTCGGTGACACCTACGACAGCGACTTCGA
CCCCATTGTCATCTCCGGTACCGACGTGACCATCACCGGTGAGGAGGGAC
ATGTCATCAACGGTAACGGTGAAGCCTACTGGGACGGCGAGGGATCCAAC
GGCGGACAGGACAAGGCAAGGCACCTGCTGTTGCAGCCACTCGCACCTCG
GCGATCCCGACCACTTTCCACACCACTGCCGTTCGTGTGCCCCTGTCCAC
CTCGGCAGCGGCGGCTGTGACCTCCCAGGCTGTCCTCCCGGCGCAGAGCT
CCGTGGCAGGCAACGGAGGCACTACCTGCACAGTGACTGAGTACGCTTCG
ATCTCCTCTGCCGTCGCATCCTGCTCCAACATCCTCCTGTCCAACATCAA
CGCCCCTGCATCGAGCACCATCGATCTCACGGGTCTGCAGACCGGTGCGG
CTGTCATCTTTGCTGGTGAAACCATGATGAAGCGCAGCGCGCTCCTTGCC
TCTTTCCTTCCTCTCGCCCTGGGGTGCGACAGCGCTGAGACTCACTCCTG
TGCCTCTGCCTTTTCCGTCTCCTCTGCGGCCGCCGCTAGCTTCTGCGCCA
CCTTCACGGCGAGCACCGTGACTGCCACGACTGGCGTGCCGGATGTCTTC
CTTTCCAACTGTGACTACAAGACCAAGCACCTCTCCAGTGCCTGCAGCTG
CCTGGGCACCGCCGATGGATCTGCTCCTGCTTCCACCCCGGCTGCCCCGG
CAGTCTCCAGCAGCAGCAAGGTAGTCTACAACGTCAAGTACGAAAACATC
ACTCTGTCCGGCATCAGCGACTACGGCATCGACATCCAGCAGGACTACGA
GAACGGTGGTGCTACCGGTGACCCGACCAACGGCGTCAAGATCGAGAACA
TCTCTTTCGTCAATGTCAAGGGTACTATGAGCGACGGCAAGGATTACTAC
ATCCTCTGTGGTGATGGCAGCTGCTCTAACTTTGTCTTCACTGATGTCGA
CATCACCGGTGGTAGCGATGATAGCTGCAACTACCCCTCTTCGGGATGCC
CTTAAGCCCGACCACTTCATTGTCGTCAAGGACATGTACAACTCCAAGAT
CGAGAACCTCAACATCCTGAACTGGCCCGTCCACTGCTTCGAGATCGAGA
ACACCGAGTACCTGACCATCTCCGGCCTGATCCTCAACAACACCGCCGGT
GACGCCGCCAACAGCAAGAGTGACGGCGACCCGGCCGCCCACAACACCGA
CGGCTTCGACATCAAGCAGAGCGACTTCCTGACCCTCTCCAACTCCTGGG
TGCACAACCAGGACGACTGTGTTGCCGTTACCAGCGGTAGCTCGATCGTC
GTCGACAACCTCTACTGCTACGGTGGTCACGGTCTCTCCATCGGCTCCAT
CGGCGGCAAGAGCAACAACACCGTCGACGGCGTCACCTTCTCCAACTCCC
AGGTCATTAACAGCGAGAACGGCTGCCGCATCAAGTCTAATGCTGATACC
ACTGGCGAGACCTTCGGTGACACCTACGACAGCGACTTCGACCCCATTGT
CATCTCCGGTACCGACGTGACCATCACCGGTGAGGAGGGACATGTCATCA
ACGGTAACGGTGAAGCCTACTGGGACGGCGAGGGATCCAACGGCGGACAG
GACAAGGCAAGGCACCTGCTGTTGCAGCCACTCGCACCTCGGCGATCCCG
ACCACTTTCCACACCACTGCCGTTCGTGTGCCCCTGTCCACCTCGGCAGC
GGCGGCTGTGACCTCCCAGGCTGTCCTCCCGGCGCAGAGCTCCGTGGCAG
GCAACGGAGGCACTACCTGCACAGTGACTGAGTACGCTTCGATCTCCTCT
GCCGTCGCATCCTGCTCCAACATCCTCCTGTCCAACATCAACGCCCCTGC
ATCGAGCACCATCGATCTCACGGGTCTGCAGACCGGTGCGGCTGTCATCT
TTGCTGGTGAAACCATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTT
CCTCTCGCCCTGGGGTGCGACAGCGCTGAGACTCACTCCTGTGCCTCTGC
CTTTTCCGTCTCCTCTGCGGCCGCCGCTAGCTTCTGCGCCACCTTCACGG
CGAGCACCGTGACTGCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAAC
TGTGACTACAAGACCAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCAC
CGCCGATGGATCTGCTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCA
GCAGCAGCAAGGTAGTCTACAACGTCAAGTACGAAAACATCACTCTGTCC
GGCATCAGCGACTACGGCATCGACATCCAGCAGGACTACGAGAACGGTGG
TGCTACCGGTGACCCGACCAACGGCGTCAAGATCGAGAACATCTCTTTCG
TCAATGTCAAGGGTACTATGAGCGACGGCAAGGATTACTACATCCTCTGT
GGTGATGGCAGCTGCTCTAACTTTGTCTTCACTGATGTCGACATCACCGG
TGGTAGCGATGATAGCTGCAACTACCCCTCTTCGGGATGCCCTTAAGCCC
GACCACTTCATTGTCGTCAAGGACATGTACAACTCCAAGATCGAGAACCT
CAACATCCTGAACTGGCCCGTCCACTGCTTCGAGATCGAGAACACCGAGT
ACCTGACCATCTCCGGCCTGATCCTCAACAACACCGCCGGTGACGCCGCC
AACAGCAAGAGTGACGGCGACCCGGCCGCCCACAACACCGACGGCTTCGA
CATCAAGCAGAGCGACTTCCTGACCCTCTCCAACTCCTGGGTGCACAACC
AGGACGACTGTGTTGCCGTTACCAGCGGTAGCTCGATCGTCGTCGACAAC
CTCTACTGCTACGGTGGTCACGGTCTCTCCATCGGCTCCATCGGCGGCAA
GAGCAACAACACCGTCGACGGCGTCACCTTCTCCAACTCCCAGGTCATTA
ACAGCGAGAACGGCTGCCGCATCAAGTCTAATGCTGATACCACTGGCGAG
ACCTTCGGTGACACCTACGACAGCGACTTCGACCCCATTGTCATCTCCGG
TACCGACGTGACCATCACCGGTGAGGAGGGACATGTCATCAACGGTAACG
GTGAAGCCTACTGGGACGGCGAGGGATCCAACGGCGGACAGGACAAGGCA
AGGCACCTGCTGTTGCAGCCACTCGCACCTCGGCGATCCCGACCACTTTC
CACACCACTGCCGTTCGTGTGCCCCTGTCCACCTCGGCAGCGGCGGCTGT
GACCTCCCAGGCTGTCCTCCCGGCGCAGAGCTCCGTGGCAGGCAACGGAG
GCACTACCTGCACAGTGACTGAGTACGCTTCGATCTCCTCTGCCGTCGCA
TCCTGCTCCAACATCCTCCTGTCCAACATCAACGCCCCTGCATCGAGCAC
CATCGATCTCACGGGTCTGCAGACCGGTGCGGCTGTCATCTTTGCTGGTG
AAACCATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCC
CTGGGGTGCGACAGCGCTGAGACTCACTCCTGTGCCTCTGCCTTTTCCGT
CTCCTCTGCGGCCGCCGCTAGCTTCTGCGCCACCTTCACGGCGAGCACCG
TGACTGCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTAC
AAGACCAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATGG
ATCTGCTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCA
AGGTA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0004650 | polygalacturonase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-17) |
| Note | CAZy:GH28 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR000743 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR006626 |
| DBxref | PFAM:PF00295 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:726775..728493 - |
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