You are here

Home

KYF_000560-T1, KYF_000560-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_000560-T1
Unique NameKYF_000560-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:1233711..1234651+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_000560-T1 ID=KYF_000560-T1|Name=KYF_000560-T1|organism=Aspergillus niger KYF3|type=mRNA|length=941bp|location=Sequence derived from alignment at ch1:1233711..1234651+ (Aspergillus niger KYF3)
ATGCGCTTCGCAGCCCTGGTTATCGGCCTTCTGGCCACCTTTGTGTCGTC
CGTGGCCGCTACGGCCCTGACCTACCGCCTCGAGGCCAACGAGAAGGCTT
GTTTCTATAACTATGTTGACCAGAGGAACGTGAAGCTCGCATTCTACTTT
GCTGTGAGTCCTCCTATTTCGCATCTAACTCCCCAATGCGGAAATGTCCA
TTAATCGGCGTTTCAATTCTGGCTTGTAGGTCCAATCCGGCGGTTCCTTC
GATATCGACTACTCCGTTGTCGGGCCCGGCGAAAAGGTGGTCCTGGATGG
CACCAAGGAAAGACAGGGCGATTTTGTGTTCACGGCCCAAAGCATTGGCG
AGTACCGGTTCTGCTTCAACAATGATATGTCGACTTTTGCGGAGAAGATT
GTCGATTTCGAGATCGCGGTATGTTTTGTTTGTTTTGGTCACCCATTATC
ACATCGGCAACCCCACAGACCCTTTGGGGTGGTATATTACAAAGTAATGT
AGTAGGGATTGAGACTAATTACGTACGTGTGTGCGCGGTGTCTACAGGTC
GAGAACGAAGAACGCGCACAGTTGCCCTCCCGCCAGGGTGCTAGTCCCGA
GCAGGCCTCCGCTCTTGAGGAGTCGATCTTCAAGCTGTCCGCCCAGCTCT
CCACCATCACCCGCAACCAGAAGTACTTCCGCACGAGAGAGAACCGGAAC
TTCAGCACCGTTCGTAGTACGGAGCGTCGTATTTTCAACTTCAGCGTGAT
TGAGGGCTTGATGATGGTTTCGATGGCTGCGCTGCAGGTCTTCGTTGTGA
GGTTCTTCTTCCAGGGTGCCAGAAAAGGTAAGTGCCGATGTCTTTTTACA
CTTGAGTTCCGAGGGTTTCAGTTGCTATGTGTTATGCCCCGTTTGGTAAT
GGGGCCGATGGAGCTGATTAATTGATACAGGTTACGTGTGA
back to top

Coding sequence (CDS) from alignment at ch1:1233711..1234651+

>KYF_000560-T1 ID=KYF_000560-T1|Name=KYF_000560-T1|organism=Aspergillus niger KYF3|type=CDS|length=2532bp|location=Sequence derived from alignment at ch1:1233711..1234651+ (Aspergillus niger KYF3)
ATGCGCTTCGCAGCCCTGGTTATCGGCCTTCTGGCCACCTTTGTGTCGTC
CGTGGCCGCTACGGCCCTGACCTACCGCCTCGAGGCCAACGAGAAGGCTT
GTTTCTATAACTATGTTGACCAGAGGAACGTGAAGCTCGCATTCTACTTT
GCTGTCCAATCCGGCGGTTCCTTCGATATCGACTACTCCGTTGTCGGGCC
CGGCGAAAAGGTGGTCCTGGATGGCACCAAGGAAAGACAGGGCGATTTTG
TGTTCACGGCCCAAAGCATTGGCGAGTACCGGTTCTGCTTCAACAATGAT
ATGTCGACTTTTGCGGAGAAGATTGTCGATTTCGAGATCGCGGTCGAGAA
CGAAGAACGCGCACAGTTGCCCTCCCGCCAGGGTGCTAGTCCCGAGCAGG
CCTCCGCTCTTGAGGAGTCGATCTTCAAGCTGTCCGCCCAGCTCTCCACC
ATCACCCGCAACCAGAAGTACTTCCGCACGAGAGAGAACCGGAACTTCAG
CACCGTTCGTAGTACGGAGCGTCGTATTTTCAACTTCAGCGTGATTGAGG
GCTTGATGATGGTTTCGATGGCTGCGCTGCAGGTCTTCGTTGTGAGGTTC
TTCTTCCAGGGTGCCAGAAAAGGTTACGTGTGAATGCGCTTCGCAGCCCT
GGTTATCGGCCTTCTGGCCACCTTTGTGTCGTCCGTGGCCGCTACGGCCC
TGACCTACCGCCTCGAGGCCAACGAGAAGGCTTGTTTCTATAACTATGTT
GACCAGAGGAACGTGAAGCTCGCATTCTACTTTGCTGTCCAATCCGGCGG
TTCCTTCGATATCGACTACTCCGTTGTCGGGCCCGGCGAAAAGGTGGTCC
TGGATGGCACCAAGGAAAGACAGGGCGATTTTGTGTTCACGGCCCAAAGC
ATTGGCGAGTACCGGTTCTGCTTCAACAATGATATGTCGACTTTTGCGGA
GAAGATTGTCGATTTCGAGATCGCGGTCGAGAACGAAGAACGCGCACAGT
TGCCCTCCCGCCAGGGTGCTAGTCCCGAGCAGGCCTCCGCTCTTGAGGAG
TCGATCTTCAAGCTGTCCGCCCAGCTCTCCACCATCACCCGCAACCAGAA
GTACTTCCGCACGAGAGAGAACCGGAACTTCAGCACCGTTCGTAGTACGG
AGCGTCGTATTTTCAACTTCAGCGTGATTGAGGGCTTGATGATGGTTTCG
ATGGCTGCGCTGCAGGTCTTCGTTGTGAGGTTCTTCTTCCAGGGTGCCAG
AAAAGGTTACGTGTGAATGCGCTTCGCAGCCCTGGTTATCGGCCTTCTGG
CCACCTTTGTGTCGTCCGTGGCCGCTACGGCCCTGACCTACCGCCTCGAG
GCCAACGAGAAGGCTTGTTTCTATAACTATGTTGACCAGAGGAACGTGAA
GCTCGCATTCTACTTTGCTGTCCAATCCGGCGGTTCCTTCGATATCGACT
ACTCCGTTGTCGGGCCCGGCGAAAAGGTGGTCCTGGATGGCACCAAGGAA
AGACAGGGCGATTTTGTGTTCACGGCCCAAAGCATTGGCGAGTACCGGTT
CTGCTTCAACAATGATATGTCGACTTTTGCGGAGAAGATTGTCGATTTCG
AGATCGCGGTCGAGAACGAAGAACGCGCACAGTTGCCCTCCCGCCAGGGT
GCTAGTCCCGAGCAGGCCTCCGCTCTTGAGGAGTCGATCTTCAAGCTGTC
CGCCCAGCTCTCCACCATCACCCGCAACCAGAAGTACTTCCGCACGAGAG
AGAACCGGAACTTCAGCACCGTTCGTAGTACGGAGCGTCGTATTTTCAAC
TTCAGCGTGATTGAGGGCTTGATGATGGTTTCGATGGCTGCGCTGCAGGT
CTTCGTTGTGAGGTTCTTCTTCCAGGGTGCCAGAAAAGGTTACGTGTGAA
TGCGCTTCGCAGCCCTGGTTATCGGCCTTCTGGCCACCTTTGTGTCGTCC
GTGGCCGCTACGGCCCTGACCTACCGCCTCGAGGCCAACGAGAAGGCTTG
TTTCTATAACTATGTTGACCAGAGGAACGTGAAGCTCGCATTCTACTTTG
CTGTCCAATCCGGCGGTTCCTTCGATATCGACTACTCCGTTGTCGGGCCC
GGCGAAAAGGTGGTCCTGGATGGCACCAAGGAAAGACAGGGCGATTTTGT
GTTCACGGCCCAAAGCATTGGCGAGTACCGGTTCTGCTTCAACAATGATA
TGTCGACTTTTGCGGAGAAGATTGTCGATTTCGAGATCGCGGTCGAGAAC
GAAGAACGCGCACAGTTGCCCTCCCGCCAGGGTGCTAGTCCCGAGCAGGC
CTCCGCTCTTGAGGAGTCGATCTTCAAGCTGTCCGCCCAGCTCTCCACCA
TCACCCGCAACCAGAAGTACTTCCGCACGAGAGAGAACCGGAACTTCAGC
ACCGTTCGTAGTACGGAGCGTCGTATTTTCAACTTCAGCGTGATTGAGGG
CTTGATGATGGTTTCGATGGCTGCGCTGCAGGTCTTCGTTGTGAGGTTCT
TCTTCCAGGGTGCCAGAAAAGGTTACGTGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_000560KYF_000560Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000560-T1.exon1KYF_000560-T1.exon1Aspergillus niger KYF3exon
KYF_000560-T1.exon2KYF_000560-T1.exon2Aspergillus niger KYF3exon
KYF_000560-T1.exon3KYF_000560-T1.exon3Aspergillus niger KYF3exon
KYF_000560-T1.exon4KYF_000560-T1.exon4Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000560-T1.cdsKYF_000560-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_000560-T1KYF_000560-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
DBxrefInterPro:IPR036598
DBxrefInterPro:IPR009038
DBxrefPFAM:PF01105
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:1233711..1234651 +
Powered by Drupal