|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:1239709..1240513+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_000562-T1 ID=KYF_000562-T1|Name=KYF_000562-T1|organism=Aspergillus niger KYF3|type=mRNA|length=805bp|location=Sequence derived from alignment at ch1:1239709..1240513+ (Aspergillus niger KYF3)
ATGCTCCTCAAAATCCTCACATTAACCACCACCCTAACCACCCTCCTAAC
ACAAACAACCTGCATCCCCCTCTCCCCATCCTCATCCTCACCCTCCTCCC
CATCCTCCTCATCAACTCCCTCTTCAACCCTCGACACCCCCGACGGCCTC
TCCTCCGCCATCGCCCAAATCATCGTCGACGAAACCATCGCCGACTCCAA
CAACTCCACCTGTCCCCCGTCCAACCGCTCCAAACAATGCTGTGAATCCA
TCAACGATATCGCGTCCCAGATCACTCAGCCTTTGGGGATGTTGATTCCA
TGGATCGGGGGCGTTGATATTAGTTCCGTTTTGGGGTTGGATTGTATGTT
CCTTTCCTTTCCCTTTTTCCTATTCTCCCTTCGGGGTGTAAGTTGTGTTT
GTGGGGGTGGATTGGCTAATGATGATGGTAATGGGTACAGGTACAGGAAT
GAGCGACGATACGCCGAATGATCAATGCTCGCATCAGGTTATGTGTTGTG
ATGGGCAGCCGAATGTATGTCCTTCCCATTTCCGGTATTTCTTTGTGGGA
TTGGTTTGGGGAGGGGAAAGTATGGTATGGTATGTGATGTGAAGCTAATG
GTGTCGGTGACAGTCCGAAGGATCTTCCCAGCCCATTTCGTCGGCTTGCA
AACCGTTCGACGATGCGATCAAGGATAAGAATGATGCTATTAATGATAGT
AAGCAGAGGGAGAGCATGTTGGTGGCGCAGGCTTCGGCTTCGGCTTCTGC
GTCGGCGTCGGCGTCGGCATCTGCCAGTGCTTCTGCCAGTGCGGGTGCTA
GCTAG back to topCoding sequence (CDS) from alignment at ch1:1239709..1240513+ >KYF_000562-T1 ID=KYF_000562-T1|Name=KYF_000562-T1|organism=Aspergillus niger KYF3|type=CDS|length=1827bp|location=Sequence derived from alignment at ch1:1239709..1240513+ (Aspergillus niger KYF3)
ATGCTCCTCAAAATCCTCACATTAACCACCACCCTAACCACCCTCCTAAC
ACAAACAACCTGCATCCCCCTCTCCCCATCCTCATCCTCACCCTCCTCCC
CATCCTCCTCATCAACTCCCTCTTCAACCCTCGACACCCCCGACGGCCTC
TCCTCCGCCATCGCCCAAATCATCGTCGACGAAACCATCGCCGACTCCAA
CAACTCCACCTGTCCCCCGTCCAACCGCTCCAAACAATGCTGTGAATCCA
TCAACGATATCGCGTCCCAGATCACTCAGCCTTTGGGGATGTTGATTCCA
TGGATCGGGGGCGTTGATATTAGTTCCGTTTTGGGGTTGGATTGTACAGG
AATGAGCGACGATACGCCGAATGATCAATGCTCGCATCAGGTTATGTGTT
GTGATGGGCAGCCGAATTCCGAAGGATCTTCCCAGCCCATTTCGTCGGCT
TGCAAACCGTTCGACGATGCGATCAAGGATAAGAATGATGCTATTAATGA
TAGTAAGCAGAGGGAGAGCATGTTGGTGGCGCAGGCTTCGGCTTCGGCTT
CTGCGTCGGCGTCGGCGTCGGCATCTGCCAGTGCTTCTGCCAGTGCGGGT
GCTAGCTAGATGCTCCTCAAAATCCTCACATTAACCACCACCCTAACCAC
CCTCCTAACACAAACAACCTGCATCCCCCTCTCCCCATCCTCATCCTCAC
CCTCCTCCCCATCCTCCTCATCAACTCCCTCTTCAACCCTCGACACCCCC
GACGGCCTCTCCTCCGCCATCGCCCAAATCATCGTCGACGAAACCATCGC
CGACTCCAACAACTCCACCTGTCCCCCGTCCAACCGCTCCAAACAATGCT
GTGAATCCATCAACGATATCGCGTCCCAGATCACTCAGCCTTTGGGGATG
TTGATTCCATGGATCGGGGGCGTTGATATTAGTTCCGTTTTGGGGTTGGA
TTGTACAGGAATGAGCGACGATACGCCGAATGATCAATGCTCGCATCAGG
TTATGTGTTGTGATGGGCAGCCGAATTCCGAAGGATCTTCCCAGCCCATT
TCGTCGGCTTGCAAACCGTTCGACGATGCGATCAAGGATAAGAATGATGC
TATTAATGATAGTAAGCAGAGGGAGAGCATGTTGGTGGCGCAGGCTTCGG
CTTCGGCTTCTGCGTCGGCGTCGGCGTCGGCATCTGCCAGTGCTTCTGCC
AGTGCGGGTGCTAGCTAGATGCTCCTCAAAATCCTCACATTAACCACCAC
CCTAACCACCCTCCTAACACAAACAACCTGCATCCCCCTCTCCCCATCCT
CATCCTCACCCTCCTCCCCATCCTCCTCATCAACTCCCTCTTCAACCCTC
GACACCCCCGACGGCCTCTCCTCCGCCATCGCCCAAATCATCGTCGACGA
AACCATCGCCGACTCCAACAACTCCACCTGTCCCCCGTCCAACCGCTCCA
AACAATGCTGTGAATCCATCAACGATATCGCGTCCCAGATCACTCAGCCT
TTGGGGATGTTGATTCCATGGATCGGGGGCGTTGATATTAGTTCCGTTTT
GGGGTTGGATTGTACAGGAATGAGCGACGATACGCCGAATGATCAATGCT
CGCATCAGGTTATGTGTTGTGATGGGCAGCCGAATTCCGAAGGATCTTCC
CAGCCCATTTCGTCGGCTTGCAAACCGTTCGACGATGCGATCAAGGATAA
GAATGATGCTATTAATGATAGTAAGCAGAGGGAGAGCATGTTGGTGGCGC
AGGCTTCGGCTTCGGCTTCTGCGTCGGCGTCGGCGTCGGCATCTGCCAGT
GCTTCTGCCAGTGCGGGTGCTAGCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0009277 | fungal-type cell wall |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005199 | structural constituent of cell wall |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | SECRETED:SignalP(1-21) |
| DBxref | InterPro:IPR001338 |
| DBxref | PFAM:PF01185 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:1239709..1240513 + |
|
