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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:900905..901960- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_001596-T1 ID=KYF_001596-T1|Name=KYF_001596-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1056bp|location=Sequence derived from alignment at ch2:900905..901960- (Aspergillus niger KYF3)
ATGCCTCTCCCCCAAATCCTAGTCGGCAAAGTCGCCGCCATTACAGGCGG
TTTAACCGGTATTGGCAGGGTAAGGCGAGCAGACACAAGCAAATGAACTC
ACAGTCATCCCCAAGGCCAGTCTAACATGATCTTCTTTTTAGGCCATCGC
TCTCGAATACCTCCGCCACGGCGCAAAAGTAGCCGTAAACCACCTCGGCG
GATCCAAAGAAGAGCCCCTCATCGAAGCGATGCGCAAAGACGTATCTGAG
ATTATCGGGTCCAATAACGACAGTGAGCAGAGCAGCAGCAGATTCATCCT
CGTTGCAGGAGACGTAACACAGCCCGAGACGGGGCGGGAGTTCGTAGCCA
AAGCCGTGGAAGCCTTTGGACGACTCGATGTGTTCGTGAGTAATGCGGGA
GTGTGCAAGTTCGAGGAGTTTCTCGAGTAAGTGGTCAACCCACCCCCTTA
ATAACTTTCCTTTTGTTTGTCTACCGTCTGGAAGAGCCATTTCTAACTGC
CTTATGTTGGCCTACTGTGTAGAGTCGACCCCCCTCTCCTCGGCCACACA
ATCAACACCAACCTCTGTGGCGCATTCTGGGCAACACAAGCAGCAGCACG
GCAAATGGCGCTGGCTCAATCGCCACCGGGAGGCTCCATTATCGGGATTA
GTTCTATCTCTGCACTTGTTGGGGGTGGACAGCAGACGCATTACACGCCC
ACCAAGGCGGGGGTGCTTAGTCTTATGCAGTCGTGTGCGGTGGCATTGGG
CAAATACGGCATCAGATGTAATGCGCTGCTGCCGGGAACGATCCGGACTC
AGCTGAATGATGAGGATATGAGTGATCCGGTGAAGAGGACGTATATGGAG
GGCAGGATTCCGTTGGGACGGTTGGGTCAGCCACCGGATTTGGCGGGGCC
GGCGGTGTTTTTGGCTTGTGAGGAGTTGAGTGGTTATGTGGTAAGTTTTC
TTCTCTCAGCTTTATGTTGGATGTTCTGGAAGAGGCTGCTAATGTGAATC
AATAGACTGGGGCGCAGATACTTGTGGATGGGGGGCTTTTCGTGAATCTT
CAGTAA back to topCoding sequence (CDS) from alignment at ch2:900905..901960- >KYF_001596-T1 ID=KYF_001596-T1|Name=KYF_001596-T1|organism=Aspergillus niger KYF3|type=CDS|length=3288bp|location=Sequence derived from alignment at ch2:900905..901960- (Aspergillus niger KYF3)
ACTGGGGCGCAGATACTTGTGGATGGGGGGCTTTTCGTGAATCTTCAGTA
AAGTCGACCCCCCTCTCCTCGGCCACACAATCAACACCAACCTCTGTGGC
GCATTCTGGGCAACACAAGCAGCAGCACGGCAAATGGCGCTGGCTCAATC
GCCACCGGGAGGCTCCATTATCGGGATTAGTTCTATCTCTGCACTTGTTG
GGGGTGGACAGCAGACGCATTACACGCCCACCAAGGCGGGGGTGCTTAGT
CTTATGCAGTCGTGTGCGGTGGCATTGGGCAAATACGGCATCAGATGTAA
TGCGCTGCTGCCGGGAACGATCCGGACTCAGCTGAATGATGAGGATATGA
GTGATCCGGTGAAGAGGACGTATATGGAGGGCAGGATTCCGTTGGGACGG
TTGGGTCAGCCACCGGATTTGGCGGGGCCGGCGGTGTTTTTGGCTTGTGA
GGAGTTGAGTGGTTATGTGGCCATCGCTCTCGAATACCTCCGCCACGGCG
CAAAAGTAGCCGTAAACCACCTCGGCGGATCCAAAGAAGAGCCCCTCATC
GAAGCGATGCGCAAAGACGTATCTGAGATTATCGGGTCCAATAACGACAG
TGAGCAGAGCAGCAGCAGATTCATCCTCGTTGCAGGAGACGTAACACAGC
CCGAGACGGGGCGGGAGTTCGTAGCCAAAGCCGTGGAAGCCTTTGGACGA
CTCGATGTGTTCGTGAGTAATGCGGGAGTGTGCAAGTTCGAGGAGTTTCT
CGAATGCCTCTCCCCCAAATCCTAGTCGGCAAAGTCGCCGCCATTACAGG
CGGTTTAACCGGTATTGGCAGGACTGGGGCGCAGATACTTGTGGATGGGG
GGCTTTTCGTGAATCTTCAGTAAAGTCGACCCCCCTCTCCTCGGCCACAC
AATCAACACCAACCTCTGTGGCGCATTCTGGGCAACACAAGCAGCAGCAC
GGCAAATGGCGCTGGCTCAATCGCCACCGGGAGGCTCCATTATCGGGATT
AGTTCTATCTCTGCACTTGTTGGGGGTGGACAGCAGACGCATTACACGCC
CACCAAGGCGGGGGTGCTTAGTCTTATGCAGTCGTGTGCGGTGGCATTGG
GCAAATACGGCATCAGATGTAATGCGCTGCTGCCGGGAACGATCCGGACT
CAGCTGAATGATGAGGATATGAGTGATCCGGTGAAGAGGACGTATATGGA
GGGCAGGATTCCGTTGGGACGGTTGGGTCAGCCACCGGATTTGGCGGGGC
CGGCGGTGTTTTTGGCTTGTGAGGAGTTGAGTGGTTATGTGGCCATCGCT
CTCGAATACCTCCGCCACGGCGCAAAAGTAGCCGTAAACCACCTCGGCGG
ATCCAAAGAAGAGCCCCTCATCGAAGCGATGCGCAAAGACGTATCTGAGA
TTATCGGGTCCAATAACGACAGTGAGCAGAGCAGCAGCAGATTCATCCTC
GTTGCAGGAGACGTAACACAGCCCGAGACGGGGCGGGAGTTCGTAGCCAA
AGCCGTGGAAGCCTTTGGACGACTCGATGTGTTCGTGAGTAATGCGGGAG
TGTGCAAGTTCGAGGAGTTTCTCGAATGCCTCTCCCCCAAATCCTAGTCG
GCAAAGTCGCCGCCATTACAGGCGGTTTAACCGGTATTGGCAGGACTGGG
GCGCAGATACTTGTGGATGGGGGGCTTTTCGTGAATCTTCAGTAAAGTCG
ACCCCCCTCTCCTCGGCCACACAATCAACACCAACCTCTGTGGCGCATTC
TGGGCAACACAAGCAGCAGCACGGCAAATGGCGCTGGCTCAATCGCCACC
GGGAGGCTCCATTATCGGGATTAGTTCTATCTCTGCACTTGTTGGGGGTG
GACAGCAGACGCATTACACGCCCACCAAGGCGGGGGTGCTTAGTCTTATG
CAGTCGTGTGCGGTGGCATTGGGCAAATACGGCATCAGATGTAATGCGCT
GCTGCCGGGAACGATCCGGACTCAGCTGAATGATGAGGATATGAGTGATC
CGGTGAAGAGGACGTATATGGAGGGCAGGATTCCGTTGGGACGGTTGGGT
CAGCCACCGGATTTGGCGGGGCCGGCGGTGTTTTTGGCTTGTGAGGAGTT
GAGTGGTTATGTGGCCATCGCTCTCGAATACCTCCGCCACGGCGCAAAAG
TAGCCGTAAACCACCTCGGCGGATCCAAAGAAGAGCCCCTCATCGAAGCG
ATGCGCAAAGACGTATCTGAGATTATCGGGTCCAATAACGACAGTGAGCA
GAGCAGCAGCAGATTCATCCTCGTTGCAGGAGACGTAACACAGCCCGAGA
CGGGGCGGGAGTTCGTAGCCAAAGCCGTGGAAGCCTTTGGACGACTCGAT
GTGTTCGTGAGTAATGCGGGAGTGTGCAAGTTCGAGGAGTTTCTCGAATG
CCTCTCCCCCAAATCCTAGTCGGCAAAGTCGCCGCCATTACAGGCGGTTT
AACCGGTATTGGCAGGACTGGGGCGCAGATACTTGTGGATGGGGGGCTTT
TCGTGAATCTTCAGTAAAGTCGACCCCCCTCTCCTCGGCCACACAATCAA
CACCAACCTCTGTGGCGCATTCTGGGCAACACAAGCAGCAGCACGGCAAA
TGGCGCTGGCTCAATCGCCACCGGGAGGCTCCATTATCGGGATTAGTTCT
ATCTCTGCACTTGTTGGGGGTGGACAGCAGACGCATTACACGCCCACCAA
GGCGGGGGTGCTTAGTCTTATGCAGTCGTGTGCGGTGGCATTGGGCAAAT
ACGGCATCAGATGTAATGCGCTGCTGCCGGGAACGATCCGGACTCAGCTG
AATGATGAGGATATGAGTGATCCGGTGAAGAGGACGTATATGGAGGGCAG
GATTCCGTTGGGACGGTTGGGTCAGCCACCGGATTTGGCGGGGCCGGCGG
TGTTTTTGGCTTGTGAGGAGTTGAGTGGTTATGTGGCCATCGCTCTCGAA
TACCTCCGCCACGGCGCAAAAGTAGCCGTAAACCACCTCGGCGGATCCAA
AGAAGAGCCCCTCATCGAAGCGATGCGCAAAGACGTATCTGAGATTATCG
GGTCCAATAACGACAGTGAGCAGAGCAGCAGCAGATTCATCCTCGTTGCA
GGAGACGTAACACAGCCCGAGACGGGGCGGGAGTTCGTAGCCAAAGCCGT
GGAAGCCTTTGGACGACTCGATGTGTTCGTGAGTAATGCGGGAGTGTGCA
AGTTCGAGGAGTTTCTCGAATGCCTCTCCCCCAAATCCTAGTCGGCAAAG
TCGCCGCCATTACAGGCGGTTTAACCGGTATTGGCAGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | L-rhamnose-1-dehydrogenase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:900905..901960 - |
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