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KYF_002008-T1, KYF_002008-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002008-T1
Unique NameKYF_002008-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2152934..2154015-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002008-T1 ID=KYF_002008-T1|Name=KYF_002008-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1082bp|location=Sequence derived from alignment at ch2:2152934..2154015- (Aspergillus niger KYF3)
ATGGCCTCTCCCACAGTAAAGCTAAACAGCGGCTACGACATGCCCCTCGT
GGGCTTCGGTCTCTGGAAGGTGAACAACGACACCTGCGCCGACCAGATCT
ACCACGCCATCAAGGAAGGATACCGTCTGTTTGACGGCGCCTGCGGTACT
ACCCTCCCCTCCCCTTATAAATCACTACCAATTCCCAATCTAAACACGCA
AACCAGACTATGGCAACGAAGTCGAAGCCGGCCAAGGCATCGCCCGCGCC
ATTAAAGACGGTCTCGTCAAGCGCGAAGAGCTCTTCATCGTCTCCAAGCT
CTGGAACAGCTTCCACGATGGCGACCGCGTCGAGCCCATTTGCCGCAAGC
AGCTCGCTGACTGGGGCATCGACTACTTCGACCTGTACATTGTGCACTTC
CCCATCTCTCTGAAATACGTCGACCCTGCGGTCCGCTACCCGCCGGGCTG
GAAGTCCGAGAAGGACGAACTGGAGTTCGGCAACGCCACGATCCAGGAGA
CCTGGACAGCGATGGAGTCGCTCGTGGACAAGAAGCTTGCCCGCAGCATT
GGTATCAGTAACTTCTCTGCGCAGCTGGTCATGGATCTGCTGCGGTATGC
GCGCATTCGTCCTGCCACGCTGCAGATCGAGCATCACCCGTACCTCACGC
AGACAAGATTGGTCGAGTATGCCCAGAAGGAGGGGTTGACGGTTACGGCG
TATAGTTCTTTTGGTCCGTTGAGTTTCCTCGAGTTGAGTGTGCAGAATGC
GGTGGATTCGCCGCCGCTGTTCGAGCATCAGCTTGTTAAGAGCATTGCCG
AGAAGCACGGAAGGACGCCGGCGCAGGTGTTGTTGAGGTGGGCGACGCAG
AGGGGGATTGCTGTTATCCCCAAGAGTAACAACCCTCAGCGGTTGAAGCA
GAATTTGGATGTTACTGGGTGGAATTTGGAGGAGGAGGAGATCAAGGCTA
TTTCTGGGTTGGATCGCGGGTTGCGGTTCAATGATCCTTTGGGAGTGAGT
TTCCTTCCGCTTTTTATTTGATACGTGGGGATATTTGCTAACTTGATTAT
TACAGTACGGACTCTACGCTCCTATTTTCTAG
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Coding sequence (CDS) from alignment at ch2:2152934..2154015-

>KYF_002008-T1 ID=KYF_002008-T1|Name=KYF_002008-T1|organism=Aspergillus niger KYF3|type=CDS|length=2880bp|location=Sequence derived from alignment at ch2:2152934..2154015- (Aspergillus niger KYF3)
TACGGACTCTACGCTCCTATTTTCTAGACTATGGCAACGAAGTCGAAGCC
GGCCAAGGCATCGCCCGCGCCATTAAAGACGGTCTCGTCAAGCGCGAAGA
GCTCTTCATCGTCTCCAAGCTCTGGAACAGCTTCCACGATGGCGACCGCG
TCGAGCCCATTTGCCGCAAGCAGCTCGCTGACTGGGGCATCGACTACTTC
GACCTGTACATTGTGCACTTCCCCATCTCTCTGAAATACGTCGACCCTGC
GGTCCGCTACCCGCCGGGCTGGAAGTCCGAGAAGGACGAACTGGAGTTCG
GCAACGCCACGATCCAGGAGACCTGGACAGCGATGGAGTCGCTCGTGGAC
AAGAAGCTTGCCCGCAGCATTGGTATCAGTAACTTCTCTGCGCAGCTGGT
CATGGATCTGCTGCGGTATGCGCGCATTCGTCCTGCCACGCTGCAGATCG
AGCATCACCCGTACCTCACGCAGACAAGATTGGTCGAGTATGCCCAGAAG
GAGGGGTTGACGGTTACGGCGTATAGTTCTTTTGGTCCGTTGAGTTTCCT
CGAGTTGAGTGTGCAGAATGCGGTGGATTCGCCGCCGCTGTTCGAGCATC
AGCTTGTTAAGAGCATTGCCGAGAAGCACGGAAGGACGCCGGCGCAGGTG
TTGTTGAGGTGGGCGACGCAGAGGGGGATTGCTGTTATCCCCAAGAGTAA
CAACCCTCAGCGGTTGAAGCAGAATTTGGATGTTACTGGGTGGAATTTGG
AGGAGGAGGAGATCAAGGCTATTTCTGGGTTGGATCGCGGGTTGCGGTTC
AATGATCCTTTGGGAATGGCCTCTCCCACAGTAAAGCTAAACAGCGGCTA
CGACATGCCCCTCGTGGGCTTCGGTCTCTGGAAGGTGAACAACGACACCT
GCGCCGACCAGATCTACCACGCCATCAAGGAAGGATACCGTCTGTTTGAC
GGCGCCTGCGTACGGACTCTACGCTCCTATTTTCTAGACTATGGCAACGA
AGTCGAAGCCGGCCAAGGCATCGCCCGCGCCATTAAAGACGGTCTCGTCA
AGCGCGAAGAGCTCTTCATCGTCTCCAAGCTCTGGAACAGCTTCCACGAT
GGCGACCGCGTCGAGCCCATTTGCCGCAAGCAGCTCGCTGACTGGGGCAT
CGACTACTTCGACCTGTACATTGTGCACTTCCCCATCTCTCTGAAATACG
TCGACCCTGCGGTCCGCTACCCGCCGGGCTGGAAGTCCGAGAAGGACGAA
CTGGAGTTCGGCAACGCCACGATCCAGGAGACCTGGACAGCGATGGAGTC
GCTCGTGGACAAGAAGCTTGCCCGCAGCATTGGTATCAGTAACTTCTCTG
CGCAGCTGGTCATGGATCTGCTGCGGTATGCGCGCATTCGTCCTGCCACG
CTGCAGATCGAGCATCACCCGTACCTCACGCAGACAAGATTGGTCGAGTA
TGCCCAGAAGGAGGGGTTGACGGTTACGGCGTATAGTTCTTTTGGTCCGT
TGAGTTTCCTCGAGTTGAGTGTGCAGAATGCGGTGGATTCGCCGCCGCTG
TTCGAGCATCAGCTTGTTAAGAGCATTGCCGAGAAGCACGGAAGGACGCC
GGCGCAGGTGTTGTTGAGGTGGGCGACGCAGAGGGGGATTGCTGTTATCC
CCAAGAGTAACAACCCTCAGCGGTTGAAGCAGAATTTGGATGTTACTGGG
TGGAATTTGGAGGAGGAGGAGATCAAGGCTATTTCTGGGTTGGATCGCGG
GTTGCGGTTCAATGATCCTTTGGGAATGGCCTCTCCCACAGTAAAGCTAA
ACAGCGGCTACGACATGCCCCTCGTGGGCTTCGGTCTCTGGAAGGTGAAC
AACGACACCTGCGCCGACCAGATCTACCACGCCATCAAGGAAGGATACCG
TCTGTTTGACGGCGCCTGCGTACGGACTCTACGCTCCTATTTTCTAGACT
ATGGCAACGAAGTCGAAGCCGGCCAAGGCATCGCCCGCGCCATTAAAGAC
GGTCTCGTCAAGCGCGAAGAGCTCTTCATCGTCTCCAAGCTCTGGAACAG
CTTCCACGATGGCGACCGCGTCGAGCCCATTTGCCGCAAGCAGCTCGCTG
ACTGGGGCATCGACTACTTCGACCTGTACATTGTGCACTTCCCCATCTCT
CTGAAATACGTCGACCCTGCGGTCCGCTACCCGCCGGGCTGGAAGTCCGA
GAAGGACGAACTGGAGTTCGGCAACGCCACGATCCAGGAGACCTGGACAG
CGATGGAGTCGCTCGTGGACAAGAAGCTTGCCCGCAGCATTGGTATCAGT
AACTTCTCTGCGCAGCTGGTCATGGATCTGCTGCGGTATGCGCGCATTCG
TCCTGCCACGCTGCAGATCGAGCATCACCCGTACCTCACGCAGACAAGAT
TGGTCGAGTATGCCCAGAAGGAGGGGTTGACGGTTACGGCGTATAGTTCT
TTTGGTCCGTTGAGTTTCCTCGAGTTGAGTGTGCAGAATGCGGTGGATTC
GCCGCCGCTGTTCGAGCATCAGCTTGTTAAGAGCATTGCCGAGAAGCACG
GAAGGACGCCGGCGCAGGTGTTGTTGAGGTGGGCGACGCAGAGGGGGATT
GCTGTTATCCCCAAGAGTAACAACCCTCAGCGGTTGAAGCAGAATTTGGA
TGTTACTGGGTGGAATTTGGAGGAGGAGGAGATCAAGGCTATTTCTGGGT
TGGATCGCGGGTTGCGGTTCAATGATCCTTTGGGAATGGCCTCTCCCACA
GTAAAGCTAAACAGCGGCTACGACATGCCCCTCGTGGGCTTCGGTCTCTG
GAAGGTGAACAACGACACCTGCGCCGACCAGATCTACCACGCCATCAAGG
AAGGATACCGTCTGTTTGACGGCGCCTGCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
XYL1KYF_002008Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002008-T1KYF_002008-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002008-T1.cdsKYF_002008-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002008-T1.exon3KYF_002008-T1.exon3Aspergillus niger KYF3exon
KYF_002008-T1.exon2KYF_002008-T1.exon2Aspergillus niger KYF3exon
KYF_002008-T1.exon1KYF_002008-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR018170
DBxrefInterPro:IPR023210
DBxrefInterPro:IPR036812
DBxrefInterPro:IPR020471
DBxrefPFAM:PF00248
ProductNAD(P)H-dependent D-xylose reductase (XR)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2152934..2154015 -
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