You are here

Home

KYF_002733-T1, KYF_002733-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_002733-T1
Unique NameKYF_002733-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:4275259..4276489+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_002733-T1 ID=KYF_002733-T1|Name=KYF_002733-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1231bp|location=Sequence derived from alignment at ch2:4275259..4276489+ (Aspergillus niger KYF3)
ATGGCTTCGCCGAATCGCAATAACTACAGCTACCAAGGGATAGAATCCTA
TGATTCCGGCCGTTCCAGGCAAAACTCGGATGCTATGGACATTCACGTCA
TTACGGCCCAAGAACCTCCTCGAGAACCCCCGGACAACAACGATCCTTAT
GATGGCCATGGGGGTCCAGCTGGGACTAGCCATTATAGCAAGTACTTCTC
CCTTCTCATACTCTGCACCCCACGTACCCCGCAAAATCCCTTTTTCTCAT
GCCGTGCAAATATCACACTTATTTCTACAACTACCGGGCGACTAATTCAG
GGAACTTTCTTTTCCGTTGTTCGTTTAATCTAGGCCTCCAAACAGATGGC
TCTTCTATGAAGAAAATGGGCGAACATATCATGGATATCGCAGAGGAGTT
TACCCGCTGCCATGCGATGAACAGGAACAGGACCGTCTCGATATCTTCCA
TAAACTGTTCACAGTAGCACGGATGTCCGAGAGCTTAATCTACGCACCTC
ACCCCCCAAATGGTCGATTCCTAGATCTGGGGTGCGGCACTGGGATCTGG
GCCATTGATGTAGCCCACAAGTATCCCAATGCTTTCGTTGCTGGAGTAGA
TCTAGCACCTATACAGCCTCCCAACCACCCCGATAACTGCGAGTTCTATG
CACCTTTCGACTTTGAGGCGCCATGGACGCTTGGGGAAAATTCTTGGGAT
CTCATTCATCTACAGATGGGTTGCGGCAGTGTTCTGGGCTGGCAGAATCT
CTACAAGCGAATCTTAAGGCATCTTCAGCCTGGGGCATGGTTTGAACAAG
TGGAAATAGATTTCGAACCCCGCTGCGATGATCGCTCCCTGAATGGACTG
GCACTCCGGGAGTGGTACCAGTACCTGAAGCAGGCGACACAAGATACAAT
GCGACCCATAGCGCACAGCTCGCGGGATACCATCAGACACCTTGAGGAGG
CAGGCTTTACCCAGATCGACCATCAGATGGTGGGGCTGCCTCTCAACCCT
TGGCACCGTGATGAACATGAGCAGAAGGTAGCCCGTTGGTATAACCTCGC
AATCTCTGAGAGTATCGAGACGCTCAGCCTCGCCCCTTTCAGTCGCATCT
TTCACTGGGATCTGGATAGGATCAGACAGATCACAGCGGAGGTCAAGTCA
CAAGCCTTCAACAAGGAAATCCACGCTTACAATATCTTACATATATACCA
GGCACGGAAGCCGGGCGGCCCATCACTTTGA
back to top

Coding sequence (CDS) from alignment at ch2:4275259..4276489+

>KYF_002733-T1 ID=KYF_002733-T1|Name=KYF_002733-T1|organism=Aspergillus niger KYF3|type=CDS|length=2058bp|location=Sequence derived from alignment at ch2:4275259..4276489+ (Aspergillus niger KYF3)
ATGGCTTCGCCGAATCGCAATAACTACAGCTACCAAGGGATAGAATCCTA
TGATTCCGGCCGTTCCAGGCAAAACTCGGATGCTATGGACATTCACGTCA
TTACGGCCCAAGAACCTCCTCGAGAACCCCCGGACAACAACGATCCTTAT
GATGGCCATGGGGGTCCAGCTGGGACTAGCCATTATAGCAAAGGAGTTTA
CCCGCTGCCATGCGATGAACAGGAACAGGACCGTCTCGATATCTTCCATA
AACTGTTCACAGTAGCACGGATGTCCGAGAGCTTAATCTACGCACCTCAC
CCCCCAAATGGTCGATTCCTAGATCTGGGGTGCGGCACTGGGATCTGGGC
CATTGATGTAGCCCACAAGTATCCCAATGCTTTCGTTGCTGGAGTAGATC
TAGCACCTATACAGCCTCCCAACCACCCCGATAACTGCGAGTTCTATGCA
CCTTTCGACTTTGAGGCGCCATGGACGCTTGGGGAAAATTCTTGGGATCT
CATTCATCTACAGATGGGTTGCGGCAGTGTTCTGGGCTGGCAGAATCTCT
ACAAGCGAATCTTAAGGCATCTTCAGCCTGGGGCATGGTTTGAACAAGTG
GAAATAGATTTCGAACCCCGCTGCGATGATCGCTCCCTGAATGGACTGGC
ACTCCGGGAGTGGTACCAGTACCTGAAGCAGGCGACACAAGATACAATGC
GACCCATAGCGCACAGCTCGCGGGATACCATCAGACACCTTGAGGAGGCA
GGCTTTACCCAGATCGACCATCAGATGGTGGGGCTGCCTCTCAACCCTTG
GCACCGTGATGAACATGAGCAGAAGGTAGCCCGTTGGTATAACCTCGCAA
TCTCTGAGAGTATCGAGACGCTCAGCCTCGCCCCTTTCAGTCGCATCTTT
CACTGGGATCTGGATAGGATCAGACAGATCACAGCGGAGGTCAAGTCACA
AGCCTTCAACAAGGAAATCCACGCTTACAATATCTTACATATATACCAGG
CACGGAAGCCGGGCGGCCCATCACTTTGAATGGCTTCGCCGAATCGCAAT
AACTACAGCTACCAAGGGATAGAATCCTATGATTCCGGCCGTTCCAGGCA
AAACTCGGATGCTATGGACATTCACGTCATTACGGCCCAAGAACCTCCTC
GAGAACCCCCGGACAACAACGATCCTTATGATGGCCATGGGGGTCCAGCT
GGGACTAGCCATTATAGCAAAGGAGTTTACCCGCTGCCATGCGATGAACA
GGAACAGGACCGTCTCGATATCTTCCATAAACTGTTCACAGTAGCACGGA
TGTCCGAGAGCTTAATCTACGCACCTCACCCCCCAAATGGTCGATTCCTA
GATCTGGGGTGCGGCACTGGGATCTGGGCCATTGATGTAGCCCACAAGTA
TCCCAATGCTTTCGTTGCTGGAGTAGATCTAGCACCTATACAGCCTCCCA
ACCACCCCGATAACTGCGAGTTCTATGCACCTTTCGACTTTGAGGCGCCA
TGGACGCTTGGGGAAAATTCTTGGGATCTCATTCATCTACAGATGGGTTG
CGGCAGTGTTCTGGGCTGGCAGAATCTCTACAAGCGAATCTTAAGGCATC
TTCAGCCTGGGGCATGGTTTGAACAAGTGGAAATAGATTTCGAACCCCGC
TGCGATGATCGCTCCCTGAATGGACTGGCACTCCGGGAGTGGTACCAGTA
CCTGAAGCAGGCGACACAAGATACAATGCGACCCATAGCGCACAGCTCGC
GGGATACCATCAGACACCTTGAGGAGGCAGGCTTTACCCAGATCGACCAT
CAGATGGTGGGGCTGCCTCTCAACCCTTGGCACCGTGATGAACATGAGCA
GAAGGTAGCCCGTTGGTATAACCTCGCAATCTCTGAGAGTATCGAGACGC
TCAGCCTCGCCCCTTTCAGTCGCATCTTTCACTGGGATCTGGATAGGATC
AGACAGATCACAGCGGAGGTCAAGTCACAAGCCTTCAACAAGGAAATCCA
CGCTTACAATATCTTACATATATACCAGGCACGGAAGCCGGGCGGCCCAT
CACTTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_002733KYF_002733Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002733-T1.exon1KYF_002733-T1.exon1Aspergillus niger KYF3exon
KYF_002733-T1.exon2KYF_002733-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_002733-T1.cdsKYF_002733-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_002733-T1KYF_002733-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR029063
DBxrefPFAM:PF13649
DBxrefPFAM:PF13489
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:4275259..4276489 +
Powered by Drupal