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KYF_004139-T1, KYF_004139-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004139-T1
Unique NameKYF_004139-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:3651746..3653368+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004139-T1 ID=KYF_004139-T1|Name=KYF_004139-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1623bp|location=Sequence derived from alignment at ch3:3651746..3653368+ (Aspergillus niger KYF3)
ATGTCTCTCGTGCCCGTCGACACCACTCTGCAAGTCCCACCTCCTGATCC
GGTTCAGAAGCCCCCTGAGGTGGCCATCACGCCCTGTGACCCATGGCCTG
CACCATACTATTTTGAAGGCGGCTTGCGCCGGGTGAAGCCCTACCACTAC
ACCTACAACACTTTTTGCAAGGAGCGCTGGCGGGGTCGTGAATTGGTGGA
CATTTTCCTGTCGGAGTTTCGCGACCGTCCCGCAGAGTACTACGTACGTT
CTCATCTCTTGGCTATTCTTTAAAGAATCATATACTGACATAGTTGTTCT
GGACCGCAGAGGAAAGCCCTACAAGATGGCCTTGTTGCCGTCAACGGCAC
GCCTGCTGGCCCCAATACCGTCGTCAAGAACGGCCAGATCATCTCGCATA
CCCTGCACCGTCACGAACCCCCCGTCACCGGGAAAGAGATTGGTATCATC
CACGAGGATGACGATCTGATTGTCATTGATAAGCCTGCCGGTGTGCCCGT
CCACTCCGCTGGTCGCTACCACTACAACTCCGTGCTCGAGATCATGCGCT
CTCAACGCCATCCGGAATGGGTCCCACGACCTTGCAACCGTTTGGACCGA
CTCACCTCCGGAGTCATGTTCCTCGGAAAGACCGCGAAAGCTGCAGAGAA
CATGACCGGAAAGCTCAAGGCCCGCACCCTCCAGAAGGAGTATGTGGCGC
GCGTCAAGGGAAAATTCCCTGACGGTGTCATCGTCTGCGATCAGCCCATC
ATGTCCGTGAGCCCAAAGGTAGGCTTGAACCGCGTTCGTGCCACTGGCAA
GGAGGCAAAGACCAAGTTCCGTCGCCTGGCGTATATCCCGCCTCAAGCTC
CGGAGCCTCAGAGCGCTTCCGACGCAGAGGGACGGGTGGCGACCCCACCC
CCGATCTACACCAACGAAGACGAAGGATACAGTATCGTCCACTGTCTGCC
ATTGACTGGCCGCACGCATCAGATCCGCGTGCATCTCCAGTTCCTCGGAC
ACCCGATCTCGAACGATCCCATCTACTCCAATCGCAAAGTCTTCGGACCC
GATCTCGGAAAGAACGAGACCAGCGACGAGCGCGACAACGAGCTCATTGA
TAAGCTATGTAATATTGGCAAGACTGAAGTCCCCGACACCGTAAGCTATC
GGACACACCTTACCACAGTGCCTCTGGTACCGCCAGGCACGGACAACTCT
GTTGTGGAGGAGATAATGTCGCGCGAGCACGAGGCCGCCGTGGAGAGATA
CCACAAGCGCAAAGGCGAGATGTTATCTGGCGAGAGATGCAAGATCTGCG
ACACAGAGCTCTACTCGGATCCTAGACCTGAGGATCTAGGCATCTTCCTC
CACGCCGCGGCGTACTCTGACAAAGAGGATGGCTGGAAATACACTAGCAA
GATGCCTACCTGGGCTCTGCCGCCTGATGGCGTGGAGGGACCGCGCGAGA
TGCCCGACTGGGTGTTTGTTCCCGAGGAAGAGGAGATTGTTATCGGACAT
GCTGTCTTGCCTGGCGCGGAGGACGGCTCGGAGTCGAATATCCCTGCTCT
TGTGCAGGGTGTCGGCCTAGTCGACATTTCGTCTGGTAGGAAGGCAGATG
CCGCTGCGCAGGCGACTGCTTGA
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Coding sequence (CDS) from alignment at ch3:3651746..3653368+

>KYF_004139-T1 ID=KYF_004139-T1|Name=KYF_004139-T1|organism=Aspergillus niger KYF3|type=CDS|length=3114bp|location=Sequence derived from alignment at ch3:3651746..3653368+ (Aspergillus niger KYF3)
ATGTCTCTCGTGCCCGTCGACACCACTCTGCAAGTCCCACCTCCTGATCC
GGTTCAGAAGCCCCCTGAGGTGGCCATCACGCCCTGTGACCCATGGCCTG
CACCATACTATTTTGAAGGCGGCTTGCGCCGGGTGAAGCCCTACCACTAC
ACCTACAACACTTTTTGCAAGGAGCGCTGGCGGGGTCGTGAATTGGTGGA
CATTTTCCTGTCGGAGTTTCGCGACCGTCCCGCAGAGTACTACAGGAAAG
CCCTACAAGATGGCCTTGTTGCCGTCAACGGCACGCCTGCTGGCCCCAAT
ACCGTCGTCAAGAACGGCCAGATCATCTCGCATACCCTGCACCGTCACGA
ACCCCCCGTCACCGGGAAAGAGATTGGTATCATCCACGAGGATGACGATC
TGATTGTCATTGATAAGCCTGCCGGTGTGCCCGTCCACTCCGCTGGTCGC
TACCACTACAACTCCGTGCTCGAGATCATGCGCTCTCAACGCCATCCGGA
ATGGGTCCCACGACCTTGCAACCGTTTGGACCGACTCACCTCCGGAGTCA
TGTTCCTCGGAAAGACCGCGAAAGCTGCAGAGAACATGACCGGAAAGCTC
AAGGCCCGCACCCTCCAGAAGGAGTATGTGGCGCGCGTCAAGGGAAAATT
CCCTGACGGTGTCATCGTCTGCGATCAGCCCATCATGTCCGTGAGCCCAA
AGGTAGGCTTGAACCGCGTTCGTGCCACTGGCAAGGAGGCAAAGACCAAG
TTCCGTCGCCTGGCGTATATCCCGCCTCAAGCTCCGGAGCCTCAGAGCGC
TTCCGACGCAGAGGGACGGGTGGCGACCCCACCCCCGATCTACACCAACG
AAGACGAAGGATACAGTATCGTCCACTGTCTGCCATTGACTGGCCGCACG
CATCAGATCCGCGTGCATCTCCAGTTCCTCGGACACCCGATCTCGAACGA
TCCCATCTACTCCAATCGCAAAGTCTTCGGACCCGATCTCGGAAAGAACG
AGACCAGCGACGAGCGCGACAACGAGCTCATTGATAAGCTATGTAATATT
GGCAAGACTGAAGTCCCCGACACCGTAAGCTATCGGACACACCTTACCAC
AGTGCCTCTGGTACCGCCAGGCACGGACAACTCTGTTGTGGAGGAGATAA
TGTCGCGCGAGCACGAGGCCGCCGTGGAGAGATACCACAAGCGCAAAGGC
GAGATGTTATCTGGCGAGAGATGCAAGATCTGCGACACAGAGCTCTACTC
GGATCCTAGACCTGAGGATCTAGGCATCTTCCTCCACGCCGCGGCGTACT
CTGACAAAGAGGATGGCTGGAAATACACTAGCAAGATGCCTACCTGGGCT
CTGCCGCCTGATGGCGTGGAGGGACCGCGCGAGATGCCCGACTGGGTGTT
TGTTCCCGAGGAAGAGGAGATTGTTATCGGACATGCTGTCTTGCCTGGCG
CGGAGGACGGCTCGGAGTCGAATATCCCTGCTCTTGTGCAGGGTGTCGGC
CTAGTCGACATTTCGTCTGGTAGGAAGGCAGATGCCGCTGCGCAGGCGAC
TGCTTGAATGTCTCTCGTGCCCGTCGACACCACTCTGCAAGTCCCACCTC
CTGATCCGGTTCAGAAGCCCCCTGAGGTGGCCATCACGCCCTGTGACCCA
TGGCCTGCACCATACTATTTTGAAGGCGGCTTGCGCCGGGTGAAGCCCTA
CCACTACACCTACAACACTTTTTGCAAGGAGCGCTGGCGGGGTCGTGAAT
TGGTGGACATTTTCCTGTCGGAGTTTCGCGACCGTCCCGCAGAGTACTAC
AGGAAAGCCCTACAAGATGGCCTTGTTGCCGTCAACGGCACGCCTGCTGG
CCCCAATACCGTCGTCAAGAACGGCCAGATCATCTCGCATACCCTGCACC
GTCACGAACCCCCCGTCACCGGGAAAGAGATTGGTATCATCCACGAGGAT
GACGATCTGATTGTCATTGATAAGCCTGCCGGTGTGCCCGTCCACTCCGC
TGGTCGCTACCACTACAACTCCGTGCTCGAGATCATGCGCTCTCAACGCC
ATCCGGAATGGGTCCCACGACCTTGCAACCGTTTGGACCGACTCACCTCC
GGAGTCATGTTCCTCGGAAAGACCGCGAAAGCTGCAGAGAACATGACCGG
AAAGCTCAAGGCCCGCACCCTCCAGAAGGAGTATGTGGCGCGCGTCAAGG
GAAAATTCCCTGACGGTGTCATCGTCTGCGATCAGCCCATCATGTCCGTG
AGCCCAAAGGTAGGCTTGAACCGCGTTCGTGCCACTGGCAAGGAGGCAAA
GACCAAGTTCCGTCGCCTGGCGTATATCCCGCCTCAAGCTCCGGAGCCTC
AGAGCGCTTCCGACGCAGAGGGACGGGTGGCGACCCCACCCCCGATCTAC
ACCAACGAAGACGAAGGATACAGTATCGTCCACTGTCTGCCATTGACTGG
CCGCACGCATCAGATCCGCGTGCATCTCCAGTTCCTCGGACACCCGATCT
CGAACGATCCCATCTACTCCAATCGCAAAGTCTTCGGACCCGATCTCGGA
AAGAACGAGACCAGCGACGAGCGCGACAACGAGCTCATTGATAAGCTATG
TAATATTGGCAAGACTGAAGTCCCCGACACCGTAAGCTATCGGACACACC
TTACCACAGTGCCTCTGGTACCGCCAGGCACGGACAACTCTGTTGTGGAG
GAGATAATGTCGCGCGAGCACGAGGCCGCCGTGGAGAGATACCACAAGCG
CAAAGGCGAGATGTTATCTGGCGAGAGATGCAAGATCTGCGACACAGAGC
TCTACTCGGATCCTAGACCTGAGGATCTAGGCATCTTCCTCCACGCCGCG
GCGTACTCTGACAAAGAGGATGGCTGGAAATACACTAGCAAGATGCCTAC
CTGGGCTCTGCCGCCTGATGGCGTGGAGGGACCGCGCGAGATGCCCGACT
GGGTGTTTGTTCCCGAGGAAGAGGAGATTGTTATCGGACATGCTGTCTTG
CCTGGCGCGGAGGACGGCTCGGAGTCGAATATCCCTGCTCTTGTGCAGGG
TGTCGGCCTAGTCGACATTTCGTCTGGTAGGAAGGCAGATGCCGCTGCGC
AGGCGACTGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009451RNA modification
GO:0001522pseudouridine synthesis
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0009982pseudouridine synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_004139KYF_004139Aspergillus niger KYF3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004139-T1.exon1KYF_004139-T1.exon1Aspergillus niger KYF3exon
KYF_004139-T1.exon2KYF_004139-T1.exon2Aspergillus niger KYF3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004139-T1.cdsKYF_004139-T1.cdsAspergillus niger KYF3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004139-T1KYF_004139-T1-proteinAspergillus niger KYF3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020103
DBxrefInterPro:IPR002942
DBxrefInterPro:IPR006224
DBxrefInterPro:IPR006225
DBxrefInterPro:IPR006145
DBxrefPFAM:PF00849
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:3651746..3653368 +
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