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KYF_004868-T1, KYF_004868-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_004868-T1
Unique NameKYF_004868-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:1822338..1822975-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_004868-T1 ID=KYF_004868-T1|Name=KYF_004868-T1|organism=Aspergillus niger KYF3|type=mRNA|length=638bp|location=Sequence derived from alignment at ch4:1822338..1822975- (Aspergillus niger KYF3)
ATGGAGAACGAGAAGGGAGAGATCGTCGATCTGTATGTATCCATTCCTTC
CAAAACCAAATAATGTTGAGTTTGTGTGTGGTGCGAGATGGAGATATGGA
TGCGATTCGGTGCTCGATATACGATGATATGATATGGCTTGGAGAGATAT
ATCGCGGATATGTGCTACGGCGGGGAACATTATTGTCGAATCGACGAGGA
CATGGTTTTTAAATCAGGATCTACGATATGGAAGAGACGGAATTGAAGAA
ATATACGGAGAAAGGACAGGAGAAGGAAAGAGGAGGAATACCGAACACCG
ATCGCATCGCATATCTCTATCATCATCATCATCCAACGTCTCAATACATG
CGCAATCGCCAAAAGGACAAGCCAAGGCAAAATGCTAATATTAAATTTAA
CAGCTACGTCCCCCGCAAGTGCAGCGCCACCAACCGCATCATCAAGGCCA
ACGACCACGCCTCCGTCCAGATCTCCATCGCCAAGGTTGACGAGAACGGC
CGCTACACCGGTGAGAACCACACCTACGCTCTGTGCGGCTTCATCCGTGC
CCGTGGTGAGAGCGATGACTCCCTGAACCGCCTTGCCCAGCGTGACGGCT
ACGTCCGCAACGTCTGGACCGCTGCCCGCCAGCGCTAA
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Coding sequence (CDS) from alignment at ch4:1822338..1822975-

>KYF_004868-T1 ID=KYF_004868-T1|Name=KYF_004868-T1|organism=Aspergillus niger KYF3|type=CDS|length=534bp|location=Sequence derived from alignment at ch4:1822338..1822975- (Aspergillus niger KYF3)
CTACGTCCCCCGCAAGTGCAGCGCCACCAACCGCATCATCAAGGCCAACG
ACCACGCCTCCGTCCAGATCTCCATCGCCAAGGTTGACGAGAACGGCCGC
TACACCGGTGAGAACCACACCTACGCTCTGTGCGGCTTCATCCGTGCCCG
TGGTGAGAGCGATGACTCCCTGAACCGCCTTGCCCAGCGTGACGGCTACG
TCCGCAACGTCTGGACCGCTGCCCGCCAGCGCTAAATGGAGAACGAGAAG
GGAGAGATCGTCGATCTCTACGTCCCCCGCAAGTGCAGCGCCACCAACCG
CATCATCAAGGCCAACGACCACGCCTCCGTCCAGATCTCCATCGCCAAGG
TTGACGAGAACGGCCGCTACACCGGTGAGAACCACACCTACGCTCTGTGC
GGCTTCATCCGTGCCCGTGGTGAGAGCGATGACTCCCTGAACCGCCTTGC
CCAGCGTGACGGCTACGTCCGCAACGTCTGGACCGCTGCCCGCCAGCGCT
AAATGGAGAACGAGAAGGGAGAGATCGTCGATCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS21KYF_004868Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_004868-T1KYF_004868-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004868-T1.cdsKYF_004868-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_004868-T1.exon2KYF_004868-T1.exon2Aspergillus niger KYF3exon
KYF_004868-T1.exon1KYF_004868-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR018279
DBxrefInterPro:IPR038579
DBxrefInterPro:IPR001931
DBxrefPFAM:PF01249
Product40S ribosomal protein S21
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:1822338..1822975 -
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