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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4335000..4335642- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005641-T1 ID=KYF_005641-T1|Name=KYF_005641-T1|organism=Aspergillus niger KYF3|type=mRNA|length=643bp|location=Sequence derived from alignment at ch4:4335000..4335642- (Aspergillus niger KYF3)
ATGCCATTGACACGTTCCTCCGATCCCCTAGTGTGGATCGACTGCGAGGT
GCGGCATTCCTCTGCTTTTACCCCTCTACCAGCCGCGACTGACGAACCCC
TCCAACATTTCGATCGGCGTGTAGATGACCGGCCTTGACGCGGACACCGA
CCAAATCCTCCAAATCTGTTGCTTCATCACCGACGCCAATCTCAACCTCC
TCGAGCCCCAGGGCTTCGAAACCGTCATCCACCATCCGACCTCAGTCCTA
GACAACATGAACGCATGGTGCATCGAGACCCACGGTCGCACAGGGCTAAC
GGCGGCCGTGCAGGCCTCGACCACCACCGCGGAGGAGGCTGCGACGGCTC
TTTTGGCCTATATCCAGAAATACGTGCCACAACCCCGGCGAGGGTTGCTG
GCAGGGAACAGTGTACACGCCGACAAGGCGTTTCTGGCTAAGGGACCATA
CCAAGCGGTGCTAGACTGGCTACACTATCGGATCGTGGACGTGAGCGCAC
TCAAGGAGATGGTACGACGGTGGGGCTCAGAAGAGCTACTAGAATCCGTG
CCAGGGAAGAAGGAGGTTCATCTTGCGCGGGACGATATTCTGGAAAGCAT
CGAAGAGATGCGATTCTACCGGGGGCGATTGTTCGGATTCTAG back to topCoding sequence (CDS) from alignment at ch4:4335000..4335642- >KYF_005641-T1 ID=KYF_005641-T1|Name=KYF_005641-T1|organism=Aspergillus niger KYF3|type=CDS|length=1134bp|location=Sequence derived from alignment at ch4:4335000..4335642- (Aspergillus niger KYF3)
ATGACCGGCCTTGACGCGGACACCGACCAAATCCTCCAAATCTGTTGCTT
CATCACCGACGCCAATCTCAACCTCCTCGAGCCCCAGGGCTTCGAAACCG
TCATCCACCATCCGACCTCAGTCCTAGACAACATGAACGCATGGTGCATC
GAGACCCACGGTCGCACAGGGCTAACGGCGGCCGTGCAGGCCTCGACCAC
CACCGCGGAGGAGGCTGCGACGGCTCTTTTGGCCTATATCCAGAAATACG
TGCCACAACCCCGGCGAGGGTTGCTGGCAGGGAACAGTGTACACGCCGAC
AAGGCGTTTCTGGCTAAGGGACCATACCAAGCGGTGCTAGACTGGCTACA
CTATCGGATCGTGGACGTGAGCGCACTCAAGGAGATGGTACGACGGTGGG
GCTCAGAAGAGCTACTAGAATCCGTGCCAGGGAAGAAGGAGGTTCATCTT
GCGCGGGACGATATTCTGGAAAGCATCGAAGAGATGCGATTCTACCGGGG
GCGATTGTTCGGATTCTAGATGCCATTGACACGTTCCTCCGATCCCCTAG
TGTGGATCGACTGCGAGATGACCGGCCTTGACGCGGACACCGACCAAATC
CTCCAAATCTGTTGCTTCATCACCGACGCCAATCTCAACCTCCTCGAGCC
CCAGGGCTTCGAAACCGTCATCCACCATCCGACCTCAGTCCTAGACAACA
TGAACGCATGGTGCATCGAGACCCACGGTCGCACAGGGCTAACGGCGGCC
GTGCAGGCCTCGACCACCACCGCGGAGGAGGCTGCGACGGCTCTTTTGGC
CTATATCCAGAAATACGTGCCACAACCCCGGCGAGGGTTGCTGGCAGGGA
ACAGTGTACACGCCGACAAGGCGTTTCTGGCTAAGGGACCATACCAAGCG
GTGCTAGACTGGCTACACTATCGGATCGTGGACGTGAGCGCACTCAAGGA
GATGGTACGACGGTGGGGCTCAGAAGAGCTACTAGAATCCGTGCCAGGGA
AGAAGGAGGTTCATCTTGCGCGGGACGATATTCTGGAAAGCATCGAAGAG
ATGCGATTCTACCGGGGGCGATTGTTCGGATTCTAGATGCCATTGACACG
TTCCTCCGATCCCCTAGTGTGGATCGACTGCGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000175 | 3'-5'-exoribonuclease activity |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264V2U |
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR022894 |
| DBxref | InterPro:IPR036397 |
| DBxref | InterPro:IPR013520 |
| DBxref | PFAM:PF00929 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4335000..4335642 - |
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