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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4944119..4946227+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_005821-T1 ID=KYF_005821-T1|Name=KYF_005821-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2109bp|location=Sequence derived from alignment at ch4:4944119..4946227+ (Aspergillus niger KYF3)
ATGCCATACACTGCGCCGTTGAAGACGTCGCCTTCTGCGCAGCACATTGA
ACACTCTGAACTCACTCCACAATCCTGTCCTAGCTCCCCCACCGCTGTCG
TCTCTCACCCTCAACGCCAGCATTTGCCTCGTTCGTATTCTTCCACCTCT
TATGTGCGAAGGCACCGACGAAGCCCTTCGAGTAGCAAGGTGTTTGTCTT
TCCAGAGCCCGACGGTCGTTTCAAAGTGGATCATGTCAGCGACCCCCATG
CCAGTATTCGAACGTCGCCACCTCCCATAAGTGATGCTGTCATCCCTCCT
GGGGCTTTGATCTCACCACCTGAATCTGCCAACAATTCAAGTGATGAAGA
GGCGGCGTACCCATCTCAGGACGGGCTCCAGCTGAAGAGATTGGAGGCTG
CGGTGAGGTCCATTGAACAGAGACGAGTATCGTCACCGGAGAGGCAGTCG
TCGGAGGTTCAGCCCTCATCGAGCATGGCAGCCATTGCTGGTGGCCCAGT
CCAACCTCCACGACCCCCCCTCTCCAGAGAGGCTCGCAAAATATCCCACT
CTCGATCGGTTACAGAAACCTCAATTGACTGTAGGCAGGAGGAGGCTTTG
ACTAGCTCTCCAGAAGAAAGTGACAGAGATGATGAGCCCCCGGTCAGGCA
TCCCATGGTCCGCAAGAAGTCTGGGGAACTGGTGAGGCCAGCCCTTCGCC
CACCTTCGGCTCGGCGGCGCCCATCTAGCATGCCGGGGACTCCAACTTAC
GCAAAGGCTGTTCACTTCGACGCTCAGCTGGAACATATTCGTCATTTTCT
ACAATTGGATAAGCCTCAAGCCGTGAGTGCCGACACATCACCAGTGGAGG
ACTTTGACACAGCAGAGGAATTTCCGTTCAAGAAGGGTCATCGGGACATG
CCCGCTTTTGAGTGGGAGCTGGGTCTGTCGAACTTCCCCAAAGACAGCTC
CTCTCGGGCTAAGCAACGCGTTCGATTGGAACGCCTGCACTTGTCTCTAG
ATAAAAACACCATGATCGGAGTCGTTGGGGTCGCCAACCTGGCTTTCCAC
AAGCACGTTGCCGCTCGGTTCACTCTTGATAATTGGAAGACTGTTTCTGA
AGTCTCCGCTGAGTACAATGACGACCCTCGACGAAAGCCTATTCTGGATG
GCTATGATAGGTTTGCTTTTAGTATCCGGCTGGATGATCAGGCAAATTTG
GAGAGGAAAACCATGTTTATCTGCATTCGCTACAATGTTGCTGGAGAGGA
GTATTGGGACAACAACAACTCAGAAAACTACCAAGTCAACTTTCGCAGAG
TACCAAAAGAAATGCCCCAGGCCCAGGCTCCACCCACGCGTCCTCGTACA
AATTTGCCGAGGAGCAGGAGCTTTGCTGGATCTATCAGCCGCCCACACTC
AATGCCGCCTTCATTTGATGCGTTGTCTGAGATGGACAAGTACATTTCGT
TTGGCAACCCACCAACAAATGGCAAGAAGGAGCATTTGGCTGATGATGAT
CCGCATGACGTTGAATTGGTTGCTCCGATCCGTCGCGATAAGCAAAACCA
CCAGGTGTTTGGGAATCGCTACGATTTCGAAGCCTCATTGACGGCAGCTA
TGCGGACCAAGCCTACTCACGATCGCACGACATTGACAGCTCGAGCAAAG
TCGAAACTTCCGTCGCATGGTAGTCATAGCCATTCGTCGGAACGGAGAAC
AAGCCAGAGGGAGGAGAACGCGCCTTTGCCTAGCAGAGGTAGCCAGCAGC
CGGGGTCCCCAGACCACCATAAACCCTCTACCATCGTTTCTGGCAAGCCG
CATCGCGAGTCGTCGGTGTACAAAGAGTTGGTTGATAAATACTGCTTCTT
CGGATCCGGATCGATGAATTACCCAAATGGTGCAGTTGGTCCTGTCACGG
CAAGTCCGGACTATGAGACCCGGTCGGGCTCTAGTAGCAGTTCCAGCTCG
GTGTCTCCATGCTCATCTCCTCGGATGGATGCGGTTTATGGTGGCGATTC
TCGACACTCTCCTGCCGCCCCATCGTCACCGAACCATATCGGATATGGAT
ACCTTCAGCCTATGCAGAACAGTTTTATGAAGGATACGCAGACACCTGCT
ATCATCTAA back to topCoding sequence (CDS) from alignment at ch4:4944119..4946227+ >KYF_005821-T1 ID=KYF_005821-T1|Name=KYF_005821-T1|organism=Aspergillus niger KYF3|type=CDS|length=2109bp|location=Sequence derived from alignment at ch4:4944119..4946227+ (Aspergillus niger KYF3)
ATGCCATACACTGCGCCGTTGAAGACGTCGCCTTCTGCGCAGCACATTGA
ACACTCTGAACTCACTCCACAATCCTGTCCTAGCTCCCCCACCGCTGTCG
TCTCTCACCCTCAACGCCAGCATTTGCCTCGTTCGTATTCTTCCACCTCT
TATGTGCGAAGGCACCGACGAAGCCCTTCGAGTAGCAAGGTGTTTGTCTT
TCCAGAGCCCGACGGTCGTTTCAAAGTGGATCATGTCAGCGACCCCCATG
CCAGTATTCGAACGTCGCCACCTCCCATAAGTGATGCTGTCATCCCTCCT
GGGGCTTTGATCTCACCACCTGAATCTGCCAACAATTCAAGTGATGAAGA
GGCGGCGTACCCATCTCAGGACGGGCTCCAGCTGAAGAGATTGGAGGCTG
CGGTGAGGTCCATTGAACAGAGACGAGTATCGTCACCGGAGAGGCAGTCG
TCGGAGGTTCAGCCCTCATCGAGCATGGCAGCCATTGCTGGTGGCCCAGT
CCAACCTCCACGACCCCCCCTCTCCAGAGAGGCTCGCAAAATATCCCACT
CTCGATCGGTTACAGAAACCTCAATTGACTGTAGGCAGGAGGAGGCTTTG
ACTAGCTCTCCAGAAGAAAGTGACAGAGATGATGAGCCCCCGGTCAGGCA
TCCCATGGTCCGCAAGAAGTCTGGGGAACTGGTGAGGCCAGCCCTTCGCC
CACCTTCGGCTCGGCGGCGCCCATCTAGCATGCCGGGGACTCCAACTTAC
GCAAAGGCTGTTCACTTCGACGCTCAGCTGGAACATATTCGTCATTTTCT
ACAATTGGATAAGCCTCAAGCCGTGAGTGCCGACACATCACCAGTGGAGG
ACTTTGACACAGCAGAGGAATTTCCGTTCAAGAAGGGTCATCGGGACATG
CCCGCTTTTGAGTGGGAGCTGGGTCTGTCGAACTTCCCCAAAGACAGCTC
CTCTCGGGCTAAGCAACGCGTTCGATTGGAACGCCTGCACTTGTCTCTAG
ATAAAAACACCATGATCGGAGTCGTTGGGGTCGCCAACCTGGCTTTCCAC
AAGCACGTTGCCGCTCGGTTCACTCTTGATAATTGGAAGACTGTTTCTGA
AGTCTCCGCTGAGTACAATGACGACCCTCGACGAAAGCCTATTCTGGATG
GCTATGATAGGTTTGCTTTTAGTATCCGGCTGGATGATCAGGCAAATTTG
GAGAGGAAAACCATGTTTATCTGCATTCGCTACAATGTTGCTGGAGAGGA
GTATTGGGACAACAACAACTCAGAAAACTACCAAGTCAACTTTCGCAGAG
TACCAAAAGAAATGCCCCAGGCCCAGGCTCCACCCACGCGTCCTCGTACA
AATTTGCCGAGGAGCAGGAGCTTTGCTGGATCTATCAGCCGCCCACACTC
AATGCCGCCTTCATTTGATGCGTTGTCTGAGATGGACAAGTACATTTCGT
TTGGCAACCCACCAACAAATGGCAAGAAGGAGCATTTGGCTGATGATGAT
CCGCATGACGTTGAATTGGTTGCTCCGATCCGTCGCGATAAGCAAAACCA
CCAGGTGTTTGGGAATCGCTACGATTTCGAAGCCTCATTGACGGCAGCTA
TGCGGACCAAGCCTACTCACGATCGCACGACATTGACAGCTCGAGCAAAG
TCGAAACTTCCGTCGCATGGTAGTCATAGCCATTCGTCGGAACGGAGAAC
AAGCCAGAGGGAGGAGAACGCGCCTTTGCCTAGCAGAGGTAGCCAGCAGC
CGGGGTCCCCAGACCACCATAAACCCTCTACCATCGTTTCTGGCAAGCCG
CATCGCGAGTCGTCGGTGTACAAAGAGTTGGTTGATAAATACTGCTTCTT
CGGATCCGGATCGATGAATTACCCAAATGGTGCAGTTGGTCCTGTCACGG
CAAGTCCGGACTATGAGACCCGGTCGGGCTCTAGTAGCAGTTCCAGCTCG
GTGTCTCCATGCTCATCTCCTCGGATGGATGCGGTTTATGGTGGCGATTC
TCGACACTCTCCTGCCGCCCCATCGTCACCGAACCATATCGGATATGGAT
ACCTTCAGCCTATGCAGAACAGTTTTATGAAGGATACGCAGACACCTGCT
ATCATCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | CAZy:CBM21 |
| DBxref | InterPro:IPR038175 |
| DBxref | InterPro:IPR005036 |
| DBxref | PFAM:PF03370 |
| DBxref | PFAM:PF16760 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4944119..4946227 + |
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